data_5IT4 # _model_server_result.job_id dAo8WIdc-iJHzbBOBHIKjQ _model_server_result.datetime_utc '2025-01-02 18:40:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5it4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 5IT4 # _exptl.entry_id 5IT4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IT4 _cell.length_a 66.035 _cell.length_b 109.14 _cell.length_c 134.024 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IT4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 183 A ASP 187 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc2 A O ASP 185 A ASP 189 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc3 A OD1 ASN 339 A ASN 343 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc4 B MG MG . A MG 501 1_555 C O HOH . A HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc5 B MG MG . A MG 501 1_555 C O HOH . A HOH 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc6 B MG MG . A MG 501 1_555 C O HOH . A HOH 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5IT4 _atom_sites.fract_transf_matrix[1][1] 0.015143 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009163 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007461 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 1 MG MG . C 3 HOH A 1 601 21 HOH HOH . C 3 HOH A 2 602 192 HOH HOH . C 3 HOH A 3 603 353 HOH HOH . C 3 HOH A 4 604 99 HOH HOH . C 3 HOH A 5 605 268 HOH HOH . C 3 HOH A 6 606 188 HOH HOH . C 3 HOH A 7 607 168 HOH HOH . C 3 HOH A 8 608 108 HOH HOH . C 3 HOH A 9 609 79 HOH HOH . C 3 HOH A 10 610 229 HOH HOH . C 3 HOH A 11 611 64 HOH HOH . C 3 HOH A 12 612 83 HOH HOH . C 3 HOH A 13 613 55 HOH HOH . C 3 HOH A 14 614 73 HOH HOH . C 3 HOH A 15 615 50 HOH HOH . C 3 HOH A 16 616 88 HOH HOH . C 3 HOH A 17 617 194 HOH HOH . C 3 HOH A 18 618 271 HOH HOH . C 3 HOH A 19 619 9 HOH HOH . C 3 HOH A 20 620 8 HOH HOH . C 3 HOH A 21 621 317 HOH HOH . C 3 HOH A 22 622 41 HOH HOH . C 3 HOH A 23 623 262 HOH HOH . C 3 HOH A 24 624 90 HOH HOH . C 3 HOH A 25 625 337 HOH HOH . C 3 HOH A 26 626 10 HOH HOH . C 3 HOH A 27 627 65 HOH HOH . C 3 HOH A 28 628 46 HOH HOH . C 3 HOH A 29 629 6 HOH HOH . C 3 HOH A 30 630 132 HOH HOH . C 3 HOH A 31 631 35 HOH HOH . C 3 HOH A 32 632 19 HOH HOH . C 3 HOH A 33 633 156 HOH HOH . C 3 HOH A 34 634 82 HOH HOH . C 3 HOH A 35 635 7 HOH HOH . C 3 HOH A 36 636 57 HOH HOH . C 3 HOH A 37 637 15 HOH HOH . C 3 HOH A 38 638 238 HOH HOH . C 3 HOH A 39 639 68 HOH HOH . C 3 HOH A 40 640 146 HOH HOH . C 3 HOH A 41 641 85 HOH HOH . C 3 HOH A 42 642 111 HOH HOH . C 3 HOH A 43 643 42 HOH HOH . C 3 HOH A 44 644 136 HOH HOH . C 3 HOH A 45 645 29 HOH HOH . C 3 HOH A 46 646 107 HOH HOH . C 3 HOH A 47 647 100 HOH HOH . C 3 HOH A 48 648 95 HOH HOH . C 3 HOH A 49 649 354 HOH HOH . C 3 HOH A 50 650 92 HOH HOH . C 3 HOH A 51 651 89 HOH HOH . C 3 HOH A 52 652 56 HOH HOH . C 3 HOH A 53 653 11 HOH HOH . C 3 HOH A 54 654 236 HOH HOH . C 3 HOH A 55 655 86 HOH HOH . C 3 HOH A 56 656 25 HOH HOH . C 3 HOH A 57 657 170 HOH HOH . C 3 HOH A 58 658 135 HOH HOH . C 3 HOH A 59 659 39 HOH HOH . C 3 HOH A 60 660 152 HOH HOH . C 3 HOH A 61 661 225 HOH HOH . C 3 HOH A 62 662 63 HOH HOH . C 3 HOH A 63 663 102 HOH HOH . C 3 HOH A 64 664 131 HOH HOH . C 3 HOH A 65 665 47 HOH HOH . C 3 HOH A 66 666 59 HOH HOH . C 3 HOH A 67 667 157 HOH HOH . C 3 HOH A 68 668 81 HOH HOH . C 3 HOH A 69 669 28 HOH HOH . C 3 HOH A 70 670 20 HOH HOH . C 3 HOH A 71 671 30 HOH HOH . C 3 HOH A 72 672 161 HOH HOH . C 3 HOH A 73 673 26 HOH HOH . C 3 HOH A 74 674 38 HOH HOH . C 3 HOH A 75 675 52 HOH HOH . C 3 HOH A 76 676 263 HOH HOH . C 3 HOH A 77 677 23 HOH HOH . C 3 HOH A 78 678 60 HOH HOH . C 3 HOH A 79 679 97 HOH HOH . C 3 HOH A 80 680 142 HOH HOH . C 3 HOH A 81 681 5 HOH HOH . C 3 HOH A 82 682 16 HOH HOH . C 3 HOH A 83 683 103 HOH HOH . C 3 HOH A 84 684 18 HOH HOH . C 3 HOH A 85 685 17 HOH HOH . C 3 HOH A 86 686 304 HOH HOH . C 3 HOH A 87 687 22 HOH HOH . C 3 HOH A 88 688 183 HOH HOH . C 3 HOH A 89 689 133 HOH HOH . C 3 HOH A 90 690 4 HOH HOH . C 3 HOH A 91 691 222 HOH HOH . C 3 HOH A 92 692 113 HOH HOH . C 3 HOH A 93 693 14 HOH HOH . C 3 HOH A 94 694 185 HOH HOH . C 3 HOH A 95 695 27 HOH HOH . C 3 HOH A 96 696 149 HOH HOH . C 3 HOH A 97 697 137 HOH HOH . C 3 HOH A 98 698 36 HOH HOH . C 3 HOH A 99 699 80 HOH HOH . C 3 HOH A 100 700 213 HOH HOH . C 3 HOH A 101 701 334 HOH HOH . C 3 HOH A 102 702 145 HOH HOH . C 3 HOH A 103 703 320 HOH HOH . C 3 HOH A 104 704 264 HOH HOH . C 3 HOH A 105 705 44 HOH HOH . C 3 HOH A 106 706 162 HOH HOH . C 3 HOH A 107 707 67 HOH HOH . C 3 HOH A 108 708 1 HOH HOH . C 3 HOH A 109 709 232 HOH HOH . C 3 HOH A 110 710 40 HOH HOH . C 3 HOH A 111 711 193 HOH HOH . C 3 HOH A 112 712 84 HOH HOH . C 3 HOH A 113 713 269 HOH HOH . C 3 HOH A 114 714 198 HOH HOH . C 3 HOH A 115 715 69 HOH HOH . C 3 HOH A 116 716 37 HOH HOH . C 3 HOH A 117 717 71 HOH HOH . C 3 HOH A 118 718 96 HOH HOH . C 3 HOH A 119 719 33 HOH HOH . C 3 HOH A 120 720 34 HOH HOH . C 3 HOH A 121 721 51 HOH HOH . C 3 HOH A 122 722 31 HOH HOH . C 3 HOH A 123 723 62 HOH HOH . C 3 HOH A 124 724 187 HOH HOH . C 3 HOH A 125 725 13 HOH HOH . C 3 HOH A 126 726 72 HOH HOH . C 3 HOH A 127 727 74 HOH HOH . C 3 HOH A 128 728 93 HOH HOH . C 3 HOH A 129 729 48 HOH HOH . C 3 HOH A 130 730 77 HOH HOH . C 3 HOH A 131 731 124 HOH HOH . C 3 HOH A 132 732 54 HOH HOH . C 3 HOH A 133 733 364 HOH HOH . C 3 HOH A 134 734 211 HOH HOH . C 3 HOH A 135 735 45 HOH HOH . C 3 HOH A 136 736 134 HOH HOH . C 3 HOH A 137 737 109 HOH HOH . C 3 HOH A 138 738 130 HOH HOH . C 3 HOH A 139 739 58 HOH HOH . C 3 HOH A 140 740 2 HOH HOH . C 3 HOH A 141 741 94 HOH HOH . C 3 HOH A 142 742 32 HOH HOH . C 3 HOH A 143 743 276 HOH HOH . C 3 HOH A 144 744 101 HOH HOH . C 3 HOH A 145 745 173 HOH HOH . C 3 HOH A 146 746 3 HOH HOH . C 3 HOH A 147 747 78 HOH HOH . C 3 HOH A 148 748 298 HOH HOH . C 3 HOH A 149 749 87 HOH HOH . C 3 HOH A 150 750 24 HOH HOH . C 3 HOH A 151 751 12 HOH HOH . C 3 HOH A 152 752 116 HOH HOH . C 3 HOH A 153 753 106 HOH HOH . C 3 HOH A 154 754 110 HOH HOH . C 3 HOH A 155 755 98 HOH HOH . C 3 HOH A 156 756 150 HOH HOH . C 3 HOH A 157 757 122 HOH HOH . C 3 HOH A 158 758 250 HOH HOH . C 3 HOH A 159 759 138 HOH HOH . C 3 HOH A 160 760 341 HOH HOH . C 3 HOH A 161 761 153 HOH HOH . C 3 HOH A 162 762 209 HOH HOH . C 3 HOH A 163 763 139 HOH HOH . C 3 HOH A 164 764 277 HOH HOH . C 3 HOH A 165 765 158 HOH HOH . C 3 HOH A 166 766 91 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -13.095 _atom_site.Cartn_y -23.389 _atom_site.Cartn_z -51.403 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #