data_5ITO # _model_server_result.job_id RzRVsgDZugUfszLeXBp0_Q _model_server_result.datetime_utc '2024-11-08 09:36:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ito # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":305}' # _entry.id 5ITO # _exptl.entry_id 5ITO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.2 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ITO _cell.length_a 113.59 _cell.length_b 113.59 _cell.length_c 37.89 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ITO _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,L 1 1 B,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N # _chem_comp.formula 'C7 H16 O4' _chem_comp.formula_weight 164.2 _chem_comp.id TOE _chem_comp.mon_nstd_flag . _chem_comp.name 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CK' OI' TOE sing 402 n n OI' CH' TOE sing 403 n n CH' CG' TOE sing 404 n n CG' OF' TOE sing 405 n n CE' OF' TOE sing 406 n n CE' CD' TOE sing 407 n n CA' O2' TOE sing 408 n n CA' CB' TOE sing 409 n n OC' CB' TOE sing 410 n n OC' CD' TOE sing 411 n n O2' H1 TOE sing 412 n n CA' H2 TOE sing 413 n n CA' H3 TOE sing 414 n n CB' H4 TOE sing 415 n n CB' H5 TOE sing 416 n n CD' H6 TOE sing 417 n n CD' H7 TOE sing 418 n n CE' H8 TOE sing 419 n n CE' H9 TOE sing 420 n n CG' H10 TOE sing 421 n n CG' H11 TOE sing 422 n n CH' H12 TOE sing 423 n n CH' H13 TOE sing 424 n n CK' H14 TOE sing 425 n n CK' H15 TOE sing 426 n n CK' H16 TOE sing 427 n n # _atom_sites.entry_id 5ITO _atom_sites.fract_transf_matrix[1][1] 0.008804 _atom_sites.fract_transf_matrix[1][2] 0.005083 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010166 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026392 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG A 1 301 2 PEG PEG . D 3 EDO A 1 302 3 EDO EDO . E 4 1PE A 1 303 1 1PE P15 . F 5 6DB A 1 304 2 6DB DRG . G 6 TOE A 1 305 1 TOE 15P . H 6 TOE A 1 306 3 TOE 15P . I 3 EDO B 1 301 1 EDO EDO . J 3 EDO B 1 302 2 EDO EDO . K 5 6DB B 1 303 3 6DB DRG . L 7 HOH A 1 401 59 HOH HOH . L 7 HOH A 2 402 5 HOH HOH . L 7 HOH A 3 403 37 HOH HOH . L 7 HOH A 4 404 15 HOH HOH . L 7 HOH A 5 405 25 HOH HOH . L 7 HOH A 6 406 35 HOH HOH . L 7 HOH A 7 407 40 HOH HOH . L 7 HOH A 8 408 78 HOH HOH . L 7 HOH A 9 409 82 HOH HOH . L 7 HOH A 10 410 85 HOH HOH . L 7 HOH A 11 411 55 HOH HOH . L 7 HOH A 12 412 69 HOH HOH . L 7 HOH A 13 413 58 HOH HOH . L 7 HOH A 14 414 36 HOH HOH . L 7 HOH A 15 415 2 HOH HOH . L 7 HOH A 16 416 70 HOH HOH . L 7 HOH A 17 417 71 HOH HOH . L 7 HOH A 18 418 38 HOH HOH . L 7 HOH A 19 419 45 HOH HOH . L 7 HOH A 20 420 34 HOH HOH . L 7 HOH A 21 421 3 HOH HOH . L 7 HOH A 22 422 16 HOH HOH . L 7 HOH A 23 423 54 HOH HOH . L 7 HOH A 24 424 31 HOH HOH . L 7 HOH A 25 425 65 HOH HOH . L 7 HOH A 26 426 23 HOH HOH . L 7 HOH A 27 427 101 HOH HOH . L 7 HOH A 28 428 47 HOH HOH . L 7 HOH A 29 429 64 HOH HOH . L 7 HOH A 30 430 39 HOH HOH . L 7 HOH A 31 431 46 HOH HOH . L 7 HOH A 32 432 79 HOH HOH . L 7 HOH A 33 433 80 HOH HOH . L 7 HOH A 34 434 49 HOH HOH . L 7 HOH A 35 435 28 HOH HOH . L 7 HOH A 36 436 44 HOH HOH . L 7 HOH A 37 437 63 HOH HOH . L 7 HOH A 38 438 56 HOH HOH . L 7 HOH A 39 439 60 HOH HOH . L 7 HOH A 40 440 105 HOH HOH . L 7 HOH A 41 441 30 HOH HOH . L 7 HOH A 42 442 86 HOH HOH . L 7 HOH A 43 443 32 HOH HOH . L 7 HOH A 44 444 72 HOH HOH . L 7 HOH A 45 445 102 HOH HOH . L 7 HOH A 46 446 100 HOH HOH . L 7 HOH A 47 447 57 HOH HOH . L 7 HOH A 48 448 41 HOH HOH . L 7 HOH A 49 449 107 HOH HOH . L 7 HOH A 50 450 22 HOH HOH . L 7 HOH A 51 451 29 HOH HOH . L 7 HOH A 52 452 53 HOH HOH . L 7 HOH A 53 453 66 HOH HOH . L 7 HOH A 54 454 27 HOH HOH . L 7 HOH A 55 455 26 HOH HOH . L 7 HOH A 56 456 68 HOH HOH . L 7 HOH A 57 457 62 HOH HOH . L 7 HOH A 58 458 104 HOH HOH . L 7 HOH A 59 459 12 HOH HOH . L 7 HOH A 60 460 20 HOH HOH . L 7 HOH A 61 461 90 HOH HOH . L 7 HOH A 62 462 103 HOH HOH . L 7 HOH A 63 463 51 HOH HOH . L 7 HOH A 64 464 9 HOH HOH . L 7 HOH A 65 465 94 HOH HOH . L 7 HOH A 66 466 96 HOH HOH . L 7 HOH A 67 467 13 HOH HOH . L 7 HOH A 68 468 43 HOH HOH . L 7 HOH A 69 469 33 HOH HOH . L 7 HOH A 70 470 52 HOH HOH . M 7 HOH B 1 401 19 HOH HOH . M 7 HOH B 2 402 21 HOH HOH . M 7 HOH B 3 403 17 HOH HOH . M 7 HOH B 4 404 83 HOH HOH . M 7 HOH B 5 405 61 HOH HOH . M 7 HOH B 6 406 75 HOH HOH . M 7 HOH B 7 407 95 HOH HOH . M 7 HOH B 8 408 77 HOH HOH . M 7 HOH B 9 409 7 HOH HOH . M 7 HOH B 10 410 76 HOH HOH . M 7 HOH B 11 411 18 HOH HOH . M 7 HOH B 12 412 14 HOH HOH . M 7 HOH B 13 413 73 HOH HOH . M 7 HOH B 14 414 106 HOH HOH . M 7 HOH B 15 415 81 HOH HOH . M 7 HOH B 16 416 97 HOH HOH . M 7 HOH B 17 417 88 HOH HOH . M 7 HOH B 18 418 92 HOH HOH . M 7 HOH B 19 419 89 HOH HOH . M 7 HOH B 20 420 110 HOH HOH . M 7 HOH B 21 421 98 HOH HOH . M 7 HOH B 22 422 108 HOH HOH . M 7 HOH B 23 423 99 HOH HOH . M 7 HOH B 24 424 93 HOH HOH . M 7 HOH B 25 425 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2' TOE . . . G 6 19.789 25.084 8.425 1 71.88 ? O2' TOE 305 A 1 HETATM 2 C CA' TOE . . . G 6 18.807 24.13 8.236 1 70.82 ? CA' TOE 305 A 1 HETATM 3 C CB' TOE . . . G 6 18.586 23.141 9.333 1 69.35 ? CB' TOE 305 A 1 HETATM 4 O OC' TOE . . . G 6 18.849 21.808 9.088 1 67.83 ? OC' TOE 305 A 1 HETATM 5 C CD' TOE . . . G 6 17.8 20.918 9.082 1 67.68 ? CD' TOE 305 A 1 HETATM 6 C CE' TOE . . . G 6 18.056 19.475 8.818 1 69.53 ? CE' TOE 305 A 1 HETATM 7 O OF' TOE . . . G 6 18.103 19.001 7.523 1 71.2 ? OF' TOE 305 A 1 HETATM 8 C CG' TOE . . . G 6 19.317 18.7 6.937 1 73.63 ? CG' TOE 305 A 1 HETATM 9 C CH' TOE . . . G 6 19.566 19.224 5.561 1 76.12 ? CH' TOE 305 A 1 HETATM 10 O OI' TOE . . . G 6 20.518 18.594 4.785 1 76.54 ? OI' TOE 305 A 1 HETATM 11 C CK' TOE . . . G 6 20.397 18.643 3.41 1 76.61 ? CK' TOE 305 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #