data_5ITS
#
_model_server_result.job_id            OJOv9vdG58nt-JUOhTIYkQ 
_model_server_result.datetime_utc      '2024-11-26 01:58:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5its 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":504}' 
#
_entry.id    5ITS 
#
_exptl.entry_id    5ITS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5ITS 
_cell.length_a            113.506 
_cell.length_b            130.501 
_cell.length_c            140.512 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ITS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,M,N 1 1 
C,D,J,K,L,O,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 K N N 
? 3 L N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 113 n n 
C1 C2 GOL sing 114 n n 
C1 H11 GOL sing 115 n n 
C1 H12 GOL sing 116 n n 
O1 HO1 GOL sing 117 n n 
C2 O2 GOL sing 118 n n 
C2 C3 GOL sing 119 n n 
C2 H2 GOL sing 120 n n 
O2 HO2 GOL sing 121 n n 
C3 O3 GOL sing 122 n n 
C3 H31 GOL sing 123 n n 
C3 H32 GOL sing 124 n n 
O3 HO3 GOL sing 125 n n 
#
_atom_sites.entry_id                     5ITS 
_atom_sites.fract_transf_matrix[1][1]    0.00881 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007663 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007117 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PO4 A 1 501 501 PO4 PO4 . 
F 3 GOL A 1 502 502 GOL GOL . 
G 3 GOL A 1 503 503 GOL GOL . 
H 3 GOL A 1 504 504 GOL GOL . 
I 3 GOL B 1 301 304 GOL GOL . 
J 2 PO4 C 1 501 501 PO4 PO4 . 
K 3 GOL C 1 502 502 GOL GOL . 
L 3 GOL C 1 503 503 GOL GOL . 
M 4 HOH A 1 601 601 HOH HOH . 
M 4 HOH A 2 602 602 HOH HOH . 
M 4 HOH A 3 603 608 HOH HOH . 
M 4 HOH A 4 604 616 HOH HOH . 
M 4 HOH A 5 605 618 HOH HOH . 
M 4 HOH A 6 606 609 HOH HOH . 
M 4 HOH A 7 607 605 HOH HOH . 
M 4 HOH A 8 608 607 HOH HOH . 
M 4 HOH A 9 609 603 HOH HOH . 
M 4 HOH A 10 610 610 HOH HOH . 
M 4 HOH A 11 611 615 HOH HOH . 
M 4 HOH A 12 612 606 HOH HOH . 
M 4 HOH A 13 613 621 HOH HOH . 
M 4 HOH A 14 614 620 HOH HOH . 
M 4 HOH A 15 615 617 HOH HOH . 
M 4 HOH A 16 616 604 HOH HOH . 
M 4 HOH A 17 617 624 HOH HOH . 
M 4 HOH A 18 618 612 HOH HOH . 
M 4 HOH A 19 619 625 HOH HOH . 
M 4 HOH A 20 620 619 HOH HOH . 
M 4 HOH A 21 621 614 HOH HOH . 
M 4 HOH A 22 622 611 HOH HOH . 
M 4 HOH A 23 623 629 HOH HOH . 
M 4 HOH A 24 624 1 HOH HOH . 
M 4 HOH A 25 625 12 HOH HOH . 
M 4 HOH A 26 626 630 HOH HOH . 
M 4 HOH A 27 627 628 HOH HOH . 
M 4 HOH A 28 628 613 HOH HOH . 
M 4 HOH A 29 629 622 HOH HOH . 
M 4 HOH A 30 630 623 HOH HOH . 
M 4 HOH A 31 631 636 HOH HOH . 
M 4 HOH A 32 632 419 HOH HOH . 
M 4 HOH A 33 633 633 HOH HOH . 
M 4 HOH A 34 634 631 HOH HOH . 
M 4 HOH A 35 635 13 HOH HOH . 
M 4 HOH A 36 636 635 HOH HOH . 
M 4 HOH A 37 637 632 HOH HOH . 
M 4 HOH A 38 638 11 HOH HOH . 
M 4 HOH A 39 639 634 HOH HOH . 
M 4 HOH A 40 640 626 HOH HOH . 
M 4 HOH A 41 641 10 HOH HOH . 
M 4 HOH A 42 642 638 HOH HOH . 
M 4 HOH A 43 643 19 HOH HOH . 
M 4 HOH A 44 644 639 HOH HOH . 
M 4 HOH A 45 645 627 HOH HOH . 
M 4 HOH A 46 646 644 HOH HOH . 
M 4 HOH A 47 647 642 HOH HOH . 
M 4 HOH A 48 648 637 HOH HOH . 
M 4 HOH A 49 649 643 HOH HOH . 
M 4 HOH A 50 650 20 HOH HOH . 
M 4 HOH A 51 651 645 HOH HOH . 
M 4 HOH A 52 652 641 HOH HOH . 
M 4 HOH A 53 653 646 HOH HOH . 
M 4 HOH A 54 654 24 HOH HOH . 
M 4 HOH A 55 655 26 HOH HOH . 
M 4 HOH A 56 656 35 HOH HOH . 
M 4 HOH A 57 657 23 HOH HOH . 
M 4 HOH A 58 658 36 HOH HOH . 
M 4 HOH A 59 659 38 HOH HOH . 
M 4 HOH A 60 660 647 HOH HOH . 
M 4 HOH A 61 661 37 HOH HOH . 
M 4 HOH A 62 662 25 HOH HOH . 
M 4 HOH A 63 663 648 HOH HOH . 
M 4 HOH A 64 664 15 HOH HOH . 
M 4 HOH A 65 665 649 HOH HOH . 
M 4 HOH A 66 666 39 HOH HOH . 
N 4 HOH B 1 401 402 HOH HOH . 
N 4 HOH B 2 402 403 HOH HOH . 
N 4 HOH B 3 403 401 HOH HOH . 
N 4 HOH B 4 404 404 HOH HOH . 
N 4 HOH B 5 405 406 HOH HOH . 
N 4 HOH B 6 406 410 HOH HOH . 
N 4 HOH B 7 407 415 HOH HOH . 
N 4 HOH B 8 408 407 HOH HOH . 
N 4 HOH B 9 409 413 HOH HOH . 
N 4 HOH B 10 410 408 HOH HOH . 
N 4 HOH B 11 411 9 HOH HOH . 
N 4 HOH B 12 412 409 HOH HOH . 
N 4 HOH B 13 413 417 HOH HOH . 
N 4 HOH B 14 414 416 HOH HOH . 
N 4 HOH B 15 415 405 HOH HOH . 
N 4 HOH B 16 416 412 HOH HOH . 
N 4 HOH B 17 417 5 HOH HOH . 
N 4 HOH B 18 418 426 HOH HOH . 
N 4 HOH B 19 419 414 HOH HOH . 
N 4 HOH B 20 420 411 HOH HOH . 
N 4 HOH B 21 421 435 HOH HOH . 
N 4 HOH B 22 422 422 HOH HOH . 
N 4 HOH B 23 423 420 HOH HOH . 
N 4 HOH B 24 424 403 HOH HOH . 
N 4 HOH B 25 425 433 HOH HOH . 
N 4 HOH B 26 426 425 HOH HOH . 
N 4 HOH B 27 427 4 HOH HOH . 
N 4 HOH B 28 428 421 HOH HOH . 
N 4 HOH B 29 429 423 HOH HOH . 
N 4 HOH B 30 430 424 HOH HOH . 
N 4 HOH B 31 431 428 HOH HOH . 
N 4 HOH B 32 432 427 HOH HOH . 
N 4 HOH B 33 433 418 HOH HOH . 
N 4 HOH B 34 434 434 HOH HOH . 
N 4 HOH B 35 435 429 HOH HOH . 
N 4 HOH B 36 436 431 HOH HOH . 
N 4 HOH B 37 437 8 HOH HOH . 
N 4 HOH B 38 438 430 HOH HOH . 
N 4 HOH B 39 439 432 HOH HOH . 
N 4 HOH B 40 440 418 HOH HOH . 
N 4 HOH B 41 441 424 HOH HOH . 
N 4 HOH B 42 442 436 HOH HOH . 
N 4 HOH B 43 443 437 HOH HOH . 
N 4 HOH B 44 444 31 HOH HOH . 
N 4 HOH B 45 445 438 HOH HOH . 
N 4 HOH B 46 446 439 HOH HOH . 
N 4 HOH B 47 447 440 HOH HOH . 
N 4 HOH B 48 448 441 HOH HOH . 
N 4 HOH B 49 449 442 HOH HOH . 
N 4 HOH B 50 450 640 HOH HOH . 
N 4 HOH B 51 451 443 HOH HOH . 
N 4 HOH B 52 452 2 HOH HOH . 
O 4 HOH C 1 601 602 HOH HOH . 
O 4 HOH C 2 602 603 HOH HOH . 
O 4 HOH C 3 603 605 HOH HOH . 
O 4 HOH C 4 604 604 HOH HOH . 
O 4 HOH C 5 605 611 HOH HOH . 
O 4 HOH C 6 606 607 HOH HOH . 
O 4 HOH C 7 607 617 HOH HOH . 
O 4 HOH C 8 608 18 HOH HOH . 
O 4 HOH C 9 609 608 HOH HOH . 
O 4 HOH C 10 610 620 HOH HOH . 
O 4 HOH C 11 611 621 HOH HOH . 
O 4 HOH C 12 612 614 HOH HOH . 
O 4 HOH C 13 613 609 HOH HOH . 
O 4 HOH C 14 614 616 HOH HOH . 
O 4 HOH C 15 615 606 HOH HOH . 
O 4 HOH C 16 616 615 HOH HOH . 
O 4 HOH C 17 617 618 HOH HOH . 
O 4 HOH C 18 618 612 HOH HOH . 
O 4 HOH C 19 619 619 HOH HOH . 
O 4 HOH C 20 620 610 HOH HOH . 
O 4 HOH C 21 621 601 HOH HOH . 
O 4 HOH C 22 622 7 HOH HOH . 
O 4 HOH C 23 623 624 HOH HOH . 
O 4 HOH C 24 624 625 HOH HOH . 
O 4 HOH C 25 625 622 HOH HOH . 
O 4 HOH C 26 626 6 HOH HOH . 
O 4 HOH C 27 627 623 HOH HOH . 
O 4 HOH C 28 628 30 HOH HOH . 
O 4 HOH C 29 629 21 HOH HOH . 
O 4 HOH C 30 630 627 HOH HOH . 
O 4 HOH C 31 631 626 HOH HOH . 
O 4 HOH C 32 632 629 HOH HOH . 
O 4 HOH C 33 633 27 HOH HOH . 
O 4 HOH C 34 634 34 HOH HOH . 
O 4 HOH C 35 635 630 HOH HOH . 
O 4 HOH C 36 636 33 HOH HOH . 
O 4 HOH C 37 637 613 HOH HOH . 
O 4 HOH C 38 638 631 HOH HOH . 
O 4 HOH C 39 639 28 HOH HOH . 
O 4 HOH C 40 640 22 HOH HOH . 
O 4 HOH C 41 641 29 HOH HOH . 
P 4 HOH D 1 401 401 HOH HOH . 
P 4 HOH D 2 402 405 HOH HOH . 
P 4 HOH D 3 403 409 HOH HOH . 
P 4 HOH D 4 404 404 HOH HOH . 
P 4 HOH D 5 405 406 HOH HOH . 
P 4 HOH D 6 406 402 HOH HOH . 
P 4 HOH D 7 407 408 HOH HOH . 
P 4 HOH D 8 408 410 HOH HOH . 
P 4 HOH D 9 409 432 HOH HOH . 
P 4 HOH D 10 410 413 HOH HOH . 
P 4 HOH D 11 411 412 HOH HOH . 
P 4 HOH D 12 412 414 HOH HOH . 
P 4 HOH D 13 413 16 HOH HOH . 
P 4 HOH D 14 414 14 HOH HOH . 
P 4 HOH D 15 415 407 HOH HOH . 
P 4 HOH D 16 416 417 HOH HOH . 
P 4 HOH D 17 417 420 HOH HOH . 
P 4 HOH D 18 418 422 HOH HOH . 
P 4 HOH D 19 419 411 HOH HOH . 
P 4 HOH D 20 420 421 HOH HOH . 
P 4 HOH D 21 421 416 HOH HOH . 
P 4 HOH D 22 422 415 HOH HOH . 
P 4 HOH D 23 423 3 HOH HOH . 
P 4 HOH D 24 424 426 HOH HOH . 
P 4 HOH D 25 425 419 HOH HOH . 
P 4 HOH D 26 426 423 HOH HOH . 
P 4 HOH D 27 427 425 HOH HOH . 
P 4 HOH D 28 428 428 HOH HOH . 
P 4 HOH D 29 429 429 HOH HOH . 
P 4 HOH D 30 430 431 HOH HOH . 
P 4 HOH D 31 431 32 HOH HOH . 
P 4 HOH D 32 432 427 HOH HOH . 
P 4 HOH D 33 433 435 HOH HOH . 
P 4 HOH D 34 434 433 HOH HOH . 
P 4 HOH D 35 435 430 HOH HOH . 
P 4 HOH D 36 436 436 HOH HOH . 
P 4 HOH D 37 437 628 HOH HOH . 
P 4 HOH D 38 438 438 HOH HOH . 
P 4 HOH D 39 439 437 HOH HOH . 
P 4 HOH D 40 440 434 HOH HOH . 
P 4 HOH D 41 441 40 HOH HOH . 
P 4 HOH D 42 442 439 HOH HOH . 
P 4 HOH D 43 443 440 HOH HOH . 
P 4 HOH D 44 444 17 HOH HOH . 
P 4 HOH D 45 445 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 3 -28.85 -31.207 -22.779 1 50.71 ? C1 GOL 504 A 1 
HETATM 2 O O1 GOL . . . H 3 -28.409 -31.283 -21.414 1 51.03 ? O1 GOL 504 A 1 
HETATM 3 C C2 GOL . . . H 3 -29.65 -29.937 -22.965 1 46.38 ? C2 GOL 504 A 1 
HETATM 4 O O2 GOL . . . H 3 -30.764 -30.06 -22.1 1 50.03 ? O2 GOL 504 A 1 
HETATM 5 C C3 GOL . . . H 3 -30.143 -29.804 -24.391 1 47.8 ? C3 GOL 504 A 1 
HETATM 6 O O3 GOL . . . H 3 -29.377 -28.802 -25.054 1 45.5 ? O3 GOL 504 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           6 
#