data_5IU6 # _model_server_result.job_id e3-Qdx0neQ4IFjwR6gR5lA _model_server_result.datetime_utc '2025-01-10 09:01:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5iu6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 5IU6 # _exptl.entry_id 5IU6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 135.123 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7H-pyrrolo[2,3-d]pyrimidin-4-ol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5IU6 _cell.length_a 120.37 _cell.length_b 120.37 _cell.length_c 238.971 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -60.185 104.243478 39.8285 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 H N N # _chem_comp.formula 'C6 H5 N3 O' _chem_comp.formula_weight 135.123 _chem_comp.id 7HX _chem_comp.mon_nstd_flag . _chem_comp.name 7H-pyrrolo[2,3-d]pyrimidin-4-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O6 C6 7HX sing 1 n n C7 C8 7HX doub 2 n y C7 C5 7HX sing 3 n y C8 N9 7HX sing 4 n y C6 C5 7HX doub 5 n y C6 N1 7HX sing 6 n y C5 C4 7HX sing 7 n y N1 C2 7HX doub 8 n y N9 C4 7HX sing 9 n y C4 N3 7HX doub 10 n y C2 N3 7HX sing 11 n y C2 H2 7HX sing 12 n n N9 H3 7HX sing 13 n n C8 H4 7HX sing 14 n n C7 H5 7HX sing 15 n n O6 H6 7HX sing 16 n n # _atom_sites.entry_id 5IU6 _atom_sites.fract_transf_matrix[1][1] 0.008308 _atom_sites.fract_transf_matrix[1][2] 0.004796 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004185 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 7HX A 1 301 1 7HX 7HX . E 3 SO4 A 1 302 6 SO4 SO4 . F 2 7HX B 1 301 2 7HX 7HX . G 3 SO4 B 1 302 2 SO4 SO4 . H 2 7HX C 1 301 3 7HX 7HX . I 3 SO4 C 1 302 1 SO4 SO4 . J 4 HOH A 1 401 113 HOH HOH . J 4 HOH A 2 402 59 HOH HOH . J 4 HOH A 3 403 43 HOH HOH . J 4 HOH A 4 404 65 HOH HOH . J 4 HOH A 5 405 114 HOH HOH . J 4 HOH A 6 406 62 HOH HOH . J 4 HOH A 7 407 58 HOH HOH . J 4 HOH A 8 408 124 HOH HOH . J 4 HOH A 9 409 61 HOH HOH . J 4 HOH A 10 410 121 HOH HOH . J 4 HOH A 11 411 126 HOH HOH . J 4 HOH A 12 412 64 HOH HOH . J 4 HOH A 13 413 125 HOH HOH . J 4 HOH A 14 414 16 HOH HOH . J 4 HOH A 15 415 46 HOH HOH . J 4 HOH A 16 416 44 HOH HOH . J 4 HOH A 17 417 9 HOH HOH . J 4 HOH A 18 418 115 HOH HOH . J 4 HOH A 19 419 40 HOH HOH . J 4 HOH A 20 420 34 HOH HOH . J 4 HOH A 21 421 41 HOH HOH . J 4 HOH A 22 422 117 HOH HOH . J 4 HOH A 23 423 32 HOH HOH . J 4 HOH A 24 424 49 HOH HOH . J 4 HOH A 25 425 129 HOH HOH . J 4 HOH A 26 426 127 HOH HOH . J 4 HOH A 27 427 23 HOH HOH . J 4 HOH A 28 428 122 HOH HOH . J 4 HOH A 29 429 123 HOH HOH . J 4 HOH A 30 430 2 HOH HOH . J 4 HOH A 31 431 19 HOH HOH . J 4 HOH A 32 432 120 HOH HOH . J 4 HOH A 33 433 8 HOH HOH . J 4 HOH A 34 434 63 HOH HOH . J 4 HOH A 35 435 69 HOH HOH . J 4 HOH A 36 436 116 HOH HOH . J 4 HOH A 37 437 68 HOH HOH . J 4 HOH A 38 438 35 HOH HOH . J 4 HOH A 39 439 5 HOH HOH . J 4 HOH A 40 440 55 HOH HOH . J 4 HOH A 41 441 71 HOH HOH . J 4 HOH A 42 442 128 HOH HOH . J 4 HOH A 43 443 57 HOH HOH . J 4 HOH A 44 444 38 HOH HOH . J 4 HOH A 45 445 60 HOH HOH . J 4 HOH A 46 446 119 HOH HOH . J 4 HOH A 47 447 56 HOH HOH . J 4 HOH A 48 448 118 HOH HOH . J 4 HOH A 49 449 70 HOH HOH . K 4 HOH B 1 401 135 HOH HOH . K 4 HOH B 2 402 77 HOH HOH . K 4 HOH B 3 403 11 HOH HOH . K 4 HOH B 4 404 73 HOH HOH . K 4 HOH B 5 405 86 HOH HOH . K 4 HOH B 6 406 14 HOH HOH . K 4 HOH B 7 407 134 HOH HOH . K 4 HOH B 8 408 91 HOH HOH . K 4 HOH B 9 409 84 HOH HOH . K 4 HOH B 10 410 52 HOH HOH . K 4 HOH B 11 411 78 HOH HOH . K 4 HOH B 12 412 131 HOH HOH . K 4 HOH B 13 413 26 HOH HOH . K 4 HOH B 14 414 88 HOH HOH . K 4 HOH B 15 415 33 HOH HOH . K 4 HOH B 16 416 80 HOH HOH . K 4 HOH B 17 417 136 HOH HOH . K 4 HOH B 18 418 28 HOH HOH . K 4 HOH B 19 419 48 HOH HOH . K 4 HOH B 20 420 53 HOH HOH . K 4 HOH B 21 421 81 HOH HOH . K 4 HOH B 22 422 132 HOH HOH . K 4 HOH B 23 423 18 HOH HOH . K 4 HOH B 24 424 76 HOH HOH . K 4 HOH B 25 425 10 HOH HOH . K 4 HOH B 26 426 27 HOH HOH . K 4 HOH B 27 427 15 HOH HOH . K 4 HOH B 28 428 89 HOH HOH . K 4 HOH B 29 429 87 HOH HOH . K 4 HOH B 30 430 13 HOH HOH . K 4 HOH B 31 431 79 HOH HOH . K 4 HOH B 32 432 37 HOH HOH . K 4 HOH B 33 433 72 HOH HOH . K 4 HOH B 34 434 85 HOH HOH . K 4 HOH B 35 435 29 HOH HOH . K 4 HOH B 36 436 54 HOH HOH . K 4 HOH B 37 437 90 HOH HOH . K 4 HOH B 38 438 6 HOH HOH . K 4 HOH B 39 439 82 HOH HOH . K 4 HOH B 40 440 45 HOH HOH . K 4 HOH B 41 441 133 HOH HOH . K 4 HOH B 42 442 74 HOH HOH . K 4 HOH B 43 443 3 HOH HOH . K 4 HOH B 44 444 51 HOH HOH . K 4 HOH B 45 445 75 HOH HOH . K 4 HOH B 46 446 12 HOH HOH . K 4 HOH B 47 447 130 HOH HOH . L 4 HOH C 1 401 92 HOH HOH . L 4 HOH C 2 402 101 HOH HOH . L 4 HOH C 3 403 50 HOH HOH . L 4 HOH C 4 404 137 HOH HOH . L 4 HOH C 5 405 24 HOH HOH . L 4 HOH C 6 406 109 HOH HOH . L 4 HOH C 7 407 108 HOH HOH . L 4 HOH C 8 408 103 HOH HOH . L 4 HOH C 9 409 139 HOH HOH . L 4 HOH C 10 410 138 HOH HOH . L 4 HOH C 11 411 17 HOH HOH . L 4 HOH C 12 412 107 HOH HOH . L 4 HOH C 13 413 95 HOH HOH . L 4 HOH C 14 414 20 HOH HOH . L 4 HOH C 15 415 30 HOH HOH . L 4 HOH C 16 416 22 HOH HOH . L 4 HOH C 17 417 42 HOH HOH . L 4 HOH C 18 418 105 HOH HOH . L 4 HOH C 19 419 25 HOH HOH . L 4 HOH C 20 420 104 HOH HOH . L 4 HOH C 21 421 31 HOH HOH . L 4 HOH C 22 422 141 HOH HOH . L 4 HOH C 23 423 93 HOH HOH . L 4 HOH C 24 424 21 HOH HOH . L 4 HOH C 25 425 36 HOH HOH . L 4 HOH C 26 426 47 HOH HOH . L 4 HOH C 27 427 140 HOH HOH . L 4 HOH C 28 428 102 HOH HOH . L 4 HOH C 29 429 110 HOH HOH . L 4 HOH C 30 430 4 HOH HOH . L 4 HOH C 31 431 96 HOH HOH . L 4 HOH C 32 432 111 HOH HOH . L 4 HOH C 33 433 97 HOH HOH . L 4 HOH C 34 434 100 HOH HOH . L 4 HOH C 35 435 39 HOH HOH . L 4 HOH C 36 436 98 HOH HOH . L 4 HOH C 37 437 99 HOH HOH . L 4 HOH C 38 438 1 HOH HOH . L 4 HOH C 39 439 7 HOH HOH . L 4 HOH C 40 440 112 HOH HOH . L 4 HOH C 41 441 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O6 7HX . . . D 2 -19.853 45.115 20.548 1 23.87 ? O6 7HX 301 A 1 HETATM 2 C C6 7HX . . . D 2 -19.694 44.122 21.276 1 26.49 ? C6 7HX 301 A 1 HETATM 3 N N1 7HX . . . D 2 -20.683 43.538 22.013 1 27.79 ? N1 7HX 301 A 1 HETATM 4 C C2 7HX . . . D 2 -20.448 42.457 22.805 1 26.96 ? C2 7HX 301 A 1 HETATM 5 N N3 7HX . . . D 2 -19.213 41.912 22.916 1 27.97 ? N3 7HX 301 A 1 HETATM 6 C C4 7HX . . . D 2 -18.142 42.422 22.221 1 31.54 ? C4 7HX 301 A 1 HETATM 7 C C5 7HX . . . D 2 -18.326 43.582 21.336 1 30.74 ? C5 7HX 301 A 1 HETATM 8 N N9 7HX . . . D 2 -16.819 42.139 22.08 1 34.86 ? N9 7HX 301 A 1 HETATM 9 C C8 7HX . . . D 2 -16.166 43.008 21.215 1 32.21 ? C8 7HX 301 A 1 HETATM 10 C C7 7HX . . . D 2 -17.077 43.922 20.732 1 30.99 ? C7 7HX 301 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #