data_5IUX
#
_model_server_result.job_id            6FGibq9unRE8EMKQESo6wA 
_model_server_result.datetime_utc      '2024-11-27 12:01:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5iux 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"JA","auth_seq_id":606}' 
#
_entry.id    5IUX 
#
_exptl.entry_id    5IUX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.51 
_cell.angle_gamma         90 
_cell.entry_id            5IUX 
_cell.length_a            182.034 
_cell.length_b            134.075 
_cell.length_c            159.945 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5IUX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 U N N 
? 7 BA N N 
? 7 JA N N 
? 7 TA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 135 A CYS 135 1_555 L C7 6E3 . A 6E3 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.856 ? 
covale ? covale2 D SG CYS 135 D CYS 135 1_555 HA C7 6E3 . D 6E3 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? 
metalc ? metalc1 B O PRO 68 B PRO 68 1_555 U NA NA . B NA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.171 ? 
metalc ? metalc2 B O ILE 71 B ILE 71 1_555 U NA NA . B NA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
metalc ? metalc3 C O PRO 68 C PRO 68 1_555 BA NA NA . C NA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? 
metalc ? metalc4 C O ILE 71 C ILE 71 1_555 BA NA NA . C NA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? 
metalc ? metalc5 D O ILE 71 D ILE 71 1_555 JA NA NA . D NA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? 
metalc ? metalc6 E O PRO 68 E PRO 68 1_555 TA NA NA . E NA 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.058 ? 
metalc ? metalc7 E O ILE 71 E ILE 71 1_555 TA NA NA . E NA 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5IUX 
_atom_sites.fract_transf_matrix[1][1]    0.005493 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001219 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007459 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006404 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 LMT A 1 501 501 LMT LMT . 
G 3 PC1 A 1 502 602 PC1 PC1 . 
H 3 PC1 A 1 503 603 PC1 PC1 . 
I 3 PC1 A 1 504 601 PC1 PC1 . 
J 4 ACT A 1 505 1 ACT ACT . 
K 2 LMT A 1 506 502 LMT LMT . 
L 5 6E3 A 1 507 1 6E3 BBM . 
M 6 BR A 1 508 1 BR BR . 
N 4 ACT A 1 509 1 ACT ACT . 
O 4 ACT A 1 510 1 ACT ACT . 
P 3 PC1 B 1 601 601 PC1 PC1 . 
Q 2 LMT B 1 602 501 LMT LMT . 
R 3 PC1 B 1 603 602 PC1 PC1 . 
S 3 PC1 B 1 604 603 PC1 PC1 . 
T 6 BR B 1 605 1 BR BR . 
U 7 NA B 1 606 1 NA NA . 
V 4 ACT B 1 607 1 ACT ACT . 
W 3 PC1 C 1 601 601 PC1 PC1 . 
X 2 LMT C 1 602 501 LMT LMT . 
Y 3 PC1 C 1 603 602 PC1 PC1 . 
Z 3 PC1 C 1 604 603 PC1 PC1 . 
AA 6 BR C 1 605 1 BR BR . 
BA 7 NA C 1 606 1 NA NA . 
CA 4 ACT C 1 607 1 ACT ACT . 
DA 4 ACT C 1 608 1 ACT ACT . 
EA 3 PC1 D 1 601 601 PC1 PC1 . 
FA 3 PC1 D 1 602 602 PC1 PC1 . 
GA 3 PC1 D 1 603 603 PC1 PC1 . 
HA 5 6E3 D 1 604 1 6E3 BBM . 
IA 6 BR D 1 605 1 BR BR . 
JA 7 NA D 1 606 1 NA NA . 
KA 4 ACT D 1 607 1 ACT ACT . 
LA 4 ACT D 1 608 1 ACT ACT . 
MA 4 ACT E 1 401 1 ACT ACT . 
NA 2 LMT E 1 402 501 LMT LMT . 
OA 2 LMT E 1 403 602 LMT LMT . 
PA 3 PC1 E 1 404 601 PC1 PC1 . 
QA 3 PC1 E 1 405 603 PC1 PC1 . 
RA 3 PC1 E 1 406 604 PC1 PC1 . 
SA 6 BR E 1 407 1 BR BR . 
TA 7 NA E 1 408 1 NA NA . 
UA 4 ACT E 1 409 1 ACT ACT . 
VA 8 HOH A 1 601 6 HOH HOH . 
VA 8 HOH A 2 602 46 HOH HOH . 
VA 8 HOH A 3 603 28 HOH HOH . 
VA 8 HOH A 4 604 616 HOH HOH . 
VA 8 HOH A 5 605 10 HOH HOH . 
VA 8 HOH A 6 606 615 HOH HOH . 
VA 8 HOH A 7 607 610 HOH HOH . 
VA 8 HOH A 8 608 22 HOH HOH . 
VA 8 HOH A 9 609 2 HOH HOH . 
VA 8 HOH A 10 610 608 HOH HOH . 
VA 8 HOH A 11 611 19 HOH HOH . 
VA 8 HOH A 12 612 621 HOH HOH . 
VA 8 HOH A 13 613 35 HOH HOH . 
VA 8 HOH A 14 614 612 HOH HOH . 
VA 8 HOH A 15 615 620 HOH HOH . 
VA 8 HOH A 16 616 1 HOH HOH . 
VA 8 HOH A 17 617 611 HOH HOH . 
VA 8 HOH A 18 618 625 HOH HOH . 
VA 8 HOH A 19 619 607 HOH HOH . 
VA 8 HOH A 20 620 619 HOH HOH . 
VA 8 HOH A 21 621 2 HOH HOH . 
VA 8 HOH A 22 622 623 HOH HOH . 
VA 8 HOH A 23 623 613 HOH HOH . 
VA 8 HOH A 24 624 41 HOH HOH . 
VA 8 HOH A 25 625 42 HOH HOH . 
VA 8 HOH A 26 626 605 HOH HOH . 
WA 8 HOH B 1 701 621 HOH HOH . 
WA 8 HOH B 2 702 29 HOH HOH . 
WA 8 HOH B 3 703 11 HOH HOH . 
WA 8 HOH B 4 704 7 HOH HOH . 
WA 8 HOH B 5 705 50 HOH HOH . 
WA 8 HOH B 6 706 45 HOH HOH . 
WA 8 HOH B 7 707 49 HOH HOH . 
WA 8 HOH B 8 708 47 HOH HOH . 
WA 8 HOH B 9 709 619 HOH HOH . 
WA 8 HOH B 10 710 615 HOH HOH . 
WA 8 HOH B 11 711 614 HOH HOH . 
WA 8 HOH B 12 712 48 HOH HOH . 
WA 8 HOH B 13 713 20 HOH HOH . 
WA 8 HOH B 14 714 13 HOH HOH . 
WA 8 HOH B 15 715 617 HOH HOH . 
WA 8 HOH B 16 716 37 HOH HOH . 
WA 8 HOH B 17 717 3 HOH HOH . 
WA 8 HOH B 18 718 36 HOH HOH . 
WA 8 HOH B 19 719 617 HOH HOH . 
WA 8 HOH B 20 720 612 HOH HOH . 
WA 8 HOH B 21 721 604 HOH HOH . 
WA 8 HOH B 22 722 611 HOH HOH . 
WA 8 HOH B 23 723 25 HOH HOH . 
WA 8 HOH B 24 724 613 HOH HOH . 
WA 8 HOH B 25 725 627 HOH HOH . 
WA 8 HOH B 26 726 620 HOH HOH . 
WA 8 HOH B 27 727 616 HOH HOH . 
WA 8 HOH B 28 728 607 HOH HOH . 
WA 8 HOH B 29 729 421 HOH HOH . 
WA 8 HOH B 30 730 618 HOH HOH . 
WA 8 HOH B 31 731 626 HOH HOH . 
WA 8 HOH B 32 732 623 HOH HOH . 
WA 8 HOH B 33 733 624 HOH HOH . 
XA 8 HOH C 1 701 3 HOH HOH . 
XA 8 HOH C 2 702 418 HOH HOH . 
XA 8 HOH C 3 703 606 HOH HOH . 
XA 8 HOH C 4 704 416 HOH HOH . 
XA 8 HOH C 5 705 26 HOH HOH . 
XA 8 HOH C 6 706 16 HOH HOH . 
XA 8 HOH C 7 707 408 HOH HOH . 
XA 8 HOH C 8 708 30 HOH HOH . 
XA 8 HOH C 9 709 412 HOH HOH . 
XA 8 HOH C 10 710 414 HOH HOH . 
XA 8 HOH C 11 711 420 HOH HOH . 
XA 8 HOH C 12 712 21 HOH HOH . 
XA 8 HOH C 13 713 410 HOH HOH . 
XA 8 HOH C 14 714 15 HOH HOH . 
XA 8 HOH C 15 715 38 HOH HOH . 
XA 8 HOH C 16 716 407 HOH HOH . 
XA 8 HOH C 17 717 609 HOH HOH . 
XA 8 HOH C 18 718 417 HOH HOH . 
XA 8 HOH C 19 719 411 HOH HOH . 
XA 8 HOH C 20 720 1 HOH HOH . 
XA 8 HOH C 21 721 415 HOH HOH . 
XA 8 HOH C 22 722 33 HOH HOH . 
XA 8 HOH C 23 723 413 HOH HOH . 
XA 8 HOH C 24 724 24 HOH HOH . 
XA 8 HOH C 25 725 409 HOH HOH . 
XA 8 HOH C 26 726 608 HOH HOH . 
XA 8 HOH C 27 727 402 HOH HOH . 
XA 8 HOH C 28 728 403 HOH HOH . 
YA 8 HOH D 1 701 4 HOH HOH . 
YA 8 HOH D 2 702 621 HOH HOH . 
YA 8 HOH D 3 703 31 HOH HOH . 
YA 8 HOH D 4 704 622 HOH HOH . 
YA 8 HOH D 5 705 607 HOH HOH . 
YA 8 HOH D 6 706 613 HOH HOH . 
YA 8 HOH D 7 707 14 HOH HOH . 
YA 8 HOH D 8 708 17 HOH HOH . 
YA 8 HOH D 9 709 612 HOH HOH . 
YA 8 HOH D 10 710 620 HOH HOH . 
YA 8 HOH D 11 711 8 HOH HOH . 
YA 8 HOH D 12 712 624 HOH HOH . 
YA 8 HOH D 13 713 615 HOH HOH . 
YA 8 HOH D 14 714 619 HOH HOH . 
YA 8 HOH D 15 715 607 HOH HOH . 
YA 8 HOH D 16 716 614 HOH HOH . 
YA 8 HOH D 17 717 611 HOH HOH . 
YA 8 HOH D 18 718 23 HOH HOH . 
YA 8 HOH D 19 719 604 HOH HOH . 
YA 8 HOH D 20 720 627 HOH HOH . 
YA 8 HOH D 21 721 625 HOH HOH . 
YA 8 HOH D 22 722 616 HOH HOH . 
YA 8 HOH D 23 723 39 HOH HOH . 
YA 8 HOH D 24 724 618 HOH HOH . 
YA 8 HOH D 25 725 617 HOH HOH . 
YA 8 HOH D 26 726 623 HOH HOH . 
YA 8 HOH D 27 727 429 HOH HOH . 
YA 8 HOH D 28 728 626 HOH HOH . 
YA 8 HOH D 29 729 609 HOH HOH . 
ZA 8 HOH E 1 501 27 HOH HOH . 
ZA 8 HOH E 2 502 623 HOH HOH . 
ZA 8 HOH E 3 503 5 HOH HOH . 
ZA 8 HOH E 4 504 44 HOH HOH . 
ZA 8 HOH E 5 505 621 HOH HOH . 
ZA 8 HOH E 6 506 618 HOH HOH . 
ZA 8 HOH E 7 507 612 HOH HOH . 
ZA 8 HOH E 8 508 614 HOH HOH . 
ZA 8 HOH E 9 509 32 HOH HOH . 
ZA 8 HOH E 10 510 617 HOH HOH . 
ZA 8 HOH E 11 511 12 HOH HOH . 
ZA 8 HOH E 12 512 9 HOH HOH . 
ZA 8 HOH E 13 513 624 HOH HOH . 
ZA 8 HOH E 14 514 606 HOH HOH . 
ZA 8 HOH E 15 515 615 HOH HOH . 
ZA 8 HOH E 16 516 614 HOH HOH . 
ZA 8 HOH E 17 517 18 HOH HOH . 
ZA 8 HOH E 18 518 34 HOH HOH . 
ZA 8 HOH E 19 519 40 HOH HOH . 
ZA 8 HOH E 20 520 620 HOH HOH . 
ZA 8 HOH E 21 521 611 HOH HOH . 
ZA 8 HOH E 22 522 605 HOH HOH . 
ZA 8 HOH E 23 523 619 HOH HOH . 
ZA 8 HOH E 24 524 43 HOH HOH . 
ZA 8 HOH E 25 525 622 HOH HOH . 
ZA 8 HOH E 26 526 616 HOH HOH . 
ZA 8 HOH E 27 527 625 HOH HOH . 
ZA 8 HOH E 28 528 610 HOH HOH . 
ZA 8 HOH E 29 529 609 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         JA 
_atom_site.label_entity_id       7 
_atom_site.Cartn_x               42.699 
_atom_site.Cartn_y               -37.666 
_atom_site.Cartn_z               -11.015 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        117.33 
_atom_site.pdbx_formal_charge    1 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           606 
_atom_site.auth_asym_id          D 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#