data_5IVQ # _model_server_result.job_id gjLztismGCS_iLlCEsw49A _model_server_result.datetime_utc '2025-01-02 19:12:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ivq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 5IVQ # _exptl.entry_id 5IVQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 425.521 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Nalpha-(methoxycarbonyl)-N-{3-[(2R)-morpholin-2-yl]propyl}-beta-phenyl-L-phenylalaninamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IVQ _cell.length_a 58.12 _cell.length_b 86.18 _cell.length_c 46.52 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IVQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H31 N3 O4' _chem_comp.formula_weight 425.521 _chem_comp.id 6EH _chem_comp.mon_nstd_flag . _chem_comp.name Nalpha-(methoxycarbonyl)-N-{3-[(2R)-morpholin-2-yl]propyl}-beta-phenyl-L-phenylalaninamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C27 6EH sing 1 n n C26 N25 6EH sing 2 n n C27 C28 6EH sing 3 n n C1 O 6EH sing 4 n n C1 C2 6EH sing 5 n n O C 6EH sing 6 n n N25 C4 6EH sing 7 n n C C28 6EH sing 8 n n C C3 6EH sing 9 n n C2 N 6EH sing 10 n n C4 O5 6EH doub 11 n n C4 C6 6EH sing 12 n n N C3 6EH sing 13 n n O9 C8 6EH doub 14 n n C11 O10 6EH sing 15 n n C8 O10 6EH sing 16 n n C8 N7 6EH sing 17 n n C6 N7 6EH sing 18 n n C6 C12 6EH sing 19 n n C19 C18 6EH doub 20 n y C19 C13 6EH sing 21 n y C18 C17 6EH sing 22 n y C12 C13 6EH sing 23 n n C12 C14 6EH sing 24 n n C13 C15 6EH doub 25 n y C17 C16 6EH doub 26 n y C15 C16 6EH sing 27 n y C14 C20 6EH doub 28 n y C14 C24 6EH sing 29 n y C20 C21 6EH sing 30 n y C24 C23 6EH doub 31 n y C21 C22 6EH doub 32 n y C23 C22 6EH sing 33 n y C2 H1 6EH sing 34 n n C2 H2 6EH sing 35 n n C3 H3 6EH sing 36 n n C3 H4 6EH sing 37 n n C11 H5 6EH sing 38 n n C11 H6 6EH sing 39 n n C11 H7 6EH sing 40 n n C12 H8 6EH sing 41 n n C15 H9 6EH sing 42 n n C18 H10 6EH sing 43 n n C20 H11 6EH sing 44 n n C21 H12 6EH sing 45 n n C22 H13 6EH sing 46 n n C H14 6EH sing 47 n n N H15 6EH sing 48 n n C1 H17 6EH sing 49 n n C1 H18 6EH sing 50 n n C6 H19 6EH sing 51 n n N7 H20 6EH sing 52 n n C16 H21 6EH sing 53 n n C17 H22 6EH sing 54 n n C19 H23 6EH sing 55 n n C23 H24 6EH sing 56 n n C24 H25 6EH sing 57 n n N25 H26 6EH sing 58 n n C26 H27 6EH sing 59 n n C26 H28 6EH sing 60 n n C27 H29 6EH sing 61 n n C27 H30 6EH sing 62 n n C28 H31 6EH sing 63 n n C28 H32 6EH sing 64 n n # _atom_sites.entry_id 5IVQ _atom_sites.fract_transf_matrix[1][1] 0.017206 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6EH A 1 101 1 6EH MRK . D 3 CL A 1 102 1 CL CL . E 3 CL B 1 101 2 CL CL . F 3 CL B 1 102 3 CL CL . G 4 HOH A 1 201 91 HOH HOH . G 4 HOH A 2 202 33 HOH HOH . G 4 HOH A 3 203 78 HOH HOH . G 4 HOH A 4 204 67 HOH HOH . G 4 HOH A 5 205 61 HOH HOH . G 4 HOH A 6 206 168 HOH HOH . G 4 HOH A 7 207 42 HOH HOH . G 4 HOH A 8 208 93 HOH HOH . G 4 HOH A 9 209 109 HOH HOH . G 4 HOH A 10 210 40 HOH HOH . G 4 HOH A 11 211 189 HOH HOH . G 4 HOH A 12 212 79 HOH HOH . G 4 HOH A 13 213 76 HOH HOH . G 4 HOH A 14 214 46 HOH HOH . G 4 HOH A 15 215 165 HOH HOH . G 4 HOH A 16 216 133 HOH HOH . G 4 HOH A 17 217 87 HOH HOH . G 4 HOH A 18 218 210 HOH HOH . G 4 HOH A 19 219 75 HOH HOH . G 4 HOH A 20 220 135 HOH HOH . G 4 HOH A 21 221 18 HOH HOH . G 4 HOH A 22 222 159 HOH HOH . G 4 HOH A 23 223 20 HOH HOH . G 4 HOH A 24 224 187 HOH HOH . G 4 HOH A 25 225 92 HOH HOH . G 4 HOH A 26 226 35 HOH HOH . G 4 HOH A 27 227 9 HOH HOH . G 4 HOH A 28 228 13 HOH HOH . G 4 HOH A 29 229 108 HOH HOH . G 4 HOH A 30 230 149 HOH HOH . G 4 HOH A 31 231 62 HOH HOH . G 4 HOH A 32 232 1 HOH HOH . G 4 HOH A 33 233 100 HOH HOH . G 4 HOH A 34 234 11 HOH HOH . G 4 HOH A 35 235 60 HOH HOH . G 4 HOH A 36 236 160 HOH HOH . G 4 HOH A 37 237 186 HOH HOH . G 4 HOH A 38 238 86 HOH HOH . G 4 HOH A 39 239 164 HOH HOH . G 4 HOH A 40 240 34 HOH HOH . G 4 HOH A 41 241 84 HOH HOH . G 4 HOH A 42 242 153 HOH HOH . G 4 HOH A 43 243 17 HOH HOH . G 4 HOH A 44 244 131 HOH HOH . G 4 HOH A 45 245 143 HOH HOH . G 4 HOH A 46 246 155 HOH HOH . G 4 HOH A 47 247 72 HOH HOH . G 4 HOH A 48 248 154 HOH HOH . G 4 HOH A 49 249 22 HOH HOH . G 4 HOH A 50 250 6 HOH HOH . G 4 HOH A 51 251 38 HOH HOH . G 4 HOH A 52 252 29 HOH HOH . G 4 HOH A 53 253 110 HOH HOH . G 4 HOH A 54 254 124 HOH HOH . G 4 HOH A 55 255 199 HOH HOH . G 4 HOH A 56 256 145 HOH HOH . G 4 HOH A 57 257 25 HOH HOH . G 4 HOH A 58 258 66 HOH HOH . G 4 HOH A 59 259 116 HOH HOH . G 4 HOH A 60 260 207 HOH HOH . G 4 HOH A 61 261 188 HOH HOH . G 4 HOH A 62 262 184 HOH HOH . G 4 HOH A 63 263 69 HOH HOH . G 4 HOH A 64 264 130 HOH HOH . G 4 HOH A 65 265 166 HOH HOH . G 4 HOH A 66 266 180 HOH HOH . G 4 HOH A 67 267 148 HOH HOH . G 4 HOH A 68 268 208 HOH HOH . G 4 HOH A 69 269 142 HOH HOH . G 4 HOH A 70 270 140 HOH HOH . G 4 HOH A 71 271 126 HOH HOH . G 4 HOH A 72 272 213 HOH HOH . G 4 HOH A 73 273 214 HOH HOH . G 4 HOH A 74 274 64 HOH HOH . G 4 HOH A 75 275 178 HOH HOH . G 4 HOH A 76 276 68 HOH HOH . G 4 HOH A 77 277 190 HOH HOH . G 4 HOH A 78 278 198 HOH HOH . G 4 HOH A 79 279 175 HOH HOH . G 4 HOH A 80 280 197 HOH HOH . G 4 HOH A 81 281 144 HOH HOH . G 4 HOH A 82 282 215 HOH HOH . G 4 HOH A 83 283 181 HOH HOH . G 4 HOH A 84 284 192 HOH HOH . G 4 HOH A 85 285 170 HOH HOH . G 4 HOH A 86 286 119 HOH HOH . G 4 HOH A 87 287 177 HOH HOH . G 4 HOH A 88 288 200 HOH HOH . G 4 HOH A 89 289 115 HOH HOH . H 4 HOH B 1 201 39 HOH HOH . H 4 HOH B 2 202 122 HOH HOH . H 4 HOH B 3 203 48 HOH HOH . H 4 HOH B 4 204 19 HOH HOH . H 4 HOH B 5 205 94 HOH HOH . H 4 HOH B 6 206 21 HOH HOH . H 4 HOH B 7 207 179 HOH HOH . H 4 HOH B 8 208 137 HOH HOH . H 4 HOH B 9 209 95 HOH HOH . H 4 HOH B 10 210 152 HOH HOH . H 4 HOH B 11 211 47 HOH HOH . H 4 HOH B 12 212 88 HOH HOH . H 4 HOH B 13 213 82 HOH HOH . H 4 HOH B 14 214 150 HOH HOH . H 4 HOH B 15 215 206 HOH HOH . H 4 HOH B 16 216 57 HOH HOH . H 4 HOH B 17 217 162 HOH HOH . H 4 HOH B 18 218 169 HOH HOH . H 4 HOH B 19 219 31 HOH HOH . H 4 HOH B 20 220 43 HOH HOH . H 4 HOH B 21 221 96 HOH HOH . H 4 HOH B 22 222 185 HOH HOH . H 4 HOH B 23 223 45 HOH HOH . H 4 HOH B 24 224 81 HOH HOH . H 4 HOH B 25 225 128 HOH HOH . H 4 HOH B 26 226 73 HOH HOH . H 4 HOH B 27 227 5 HOH HOH . H 4 HOH B 28 228 163 HOH HOH . H 4 HOH B 29 229 16 HOH HOH . H 4 HOH B 30 230 111 HOH HOH . H 4 HOH B 31 231 211 HOH HOH . H 4 HOH B 32 232 10 HOH HOH . H 4 HOH B 33 233 151 HOH HOH . H 4 HOH B 34 234 37 HOH HOH . H 4 HOH B 35 235 7 HOH HOH . H 4 HOH B 36 236 52 HOH HOH . H 4 HOH B 37 237 63 HOH HOH . H 4 HOH B 38 238 26 HOH HOH . H 4 HOH B 39 239 83 HOH HOH . H 4 HOH B 40 240 44 HOH HOH . H 4 HOH B 41 241 4 HOH HOH . H 4 HOH B 42 242 85 HOH HOH . H 4 HOH B 43 243 203 HOH HOH . H 4 HOH B 44 244 54 HOH HOH . H 4 HOH B 45 245 41 HOH HOH . H 4 HOH B 46 246 36 HOH HOH . H 4 HOH B 47 247 28 HOH HOH . H 4 HOH B 48 248 99 HOH HOH . H 4 HOH B 49 249 161 HOH HOH . H 4 HOH B 50 250 112 HOH HOH . H 4 HOH B 51 251 80 HOH HOH . H 4 HOH B 52 252 176 HOH HOH . H 4 HOH B 53 253 101 HOH HOH . H 4 HOH B 54 254 132 HOH HOH . H 4 HOH B 55 255 8 HOH HOH . H 4 HOH B 56 256 90 HOH HOH . H 4 HOH B 57 257 24 HOH HOH . H 4 HOH B 58 258 51 HOH HOH . H 4 HOH B 59 259 3 HOH HOH . H 4 HOH B 60 260 129 HOH HOH . H 4 HOH B 61 261 156 HOH HOH . H 4 HOH B 62 262 97 HOH HOH . H 4 HOH B 63 263 12 HOH HOH . H 4 HOH B 64 264 59 HOH HOH . H 4 HOH B 65 265 55 HOH HOH . H 4 HOH B 66 266 136 HOH HOH . H 4 HOH B 67 267 32 HOH HOH . H 4 HOH B 68 268 167 HOH HOH . H 4 HOH B 69 269 50 HOH HOH . H 4 HOH B 70 270 102 HOH HOH . H 4 HOH B 71 271 2 HOH HOH . H 4 HOH B 72 272 49 HOH HOH . H 4 HOH B 73 273 15 HOH HOH . H 4 HOH B 74 274 125 HOH HOH . H 4 HOH B 75 275 157 HOH HOH . H 4 HOH B 76 276 65 HOH HOH . H 4 HOH B 77 277 117 HOH HOH . H 4 HOH B 78 278 23 HOH HOH . H 4 HOH B 79 279 105 HOH HOH . H 4 HOH B 80 280 27 HOH HOH . H 4 HOH B 81 281 141 HOH HOH . H 4 HOH B 82 282 53 HOH HOH . H 4 HOH B 83 283 89 HOH HOH . H 4 HOH B 84 284 14 HOH HOH . H 4 HOH B 85 285 70 HOH HOH . H 4 HOH B 86 286 158 HOH HOH . H 4 HOH B 87 287 182 HOH HOH . H 4 HOH B 88 288 30 HOH HOH . H 4 HOH B 89 289 138 HOH HOH . H 4 HOH B 90 290 121 HOH HOH . H 4 HOH B 91 291 202 HOH HOH . H 4 HOH B 92 292 103 HOH HOH . H 4 HOH B 93 293 114 HOH HOH . H 4 HOH B 94 294 146 HOH HOH . H 4 HOH B 95 295 127 HOH HOH . H 4 HOH B 96 296 183 HOH HOH . H 4 HOH B 97 297 147 HOH HOH . H 4 HOH B 98 298 193 HOH HOH . H 4 HOH B 99 299 77 HOH HOH . H 4 HOH B 100 300 71 HOH HOH . H 4 HOH B 101 301 205 HOH HOH . H 4 HOH B 102 302 74 HOH HOH . H 4 HOH B 103 303 191 HOH HOH . H 4 HOH B 104 304 171 HOH HOH . H 4 HOH B 105 305 172 HOH HOH . H 4 HOH B 106 306 139 HOH HOH . H 4 HOH B 107 307 123 HOH HOH . H 4 HOH B 108 308 194 HOH HOH . H 4 HOH B 109 309 120 HOH HOH . H 4 HOH B 110 310 58 HOH HOH . H 4 HOH B 111 311 106 HOH HOH . H 4 HOH B 112 312 113 HOH HOH . H 4 HOH B 113 313 212 HOH HOH . H 4 HOH B 114 314 56 HOH HOH . H 4 HOH B 115 315 104 HOH HOH . H 4 HOH B 116 316 98 HOH HOH . H 4 HOH B 117 317 195 HOH HOH . H 4 HOH B 118 318 173 HOH HOH . H 4 HOH B 119 319 134 HOH HOH . H 4 HOH B 120 320 216 HOH HOH . H 4 HOH B 121 321 118 HOH HOH . H 4 HOH B 122 322 204 HOH HOH . H 4 HOH B 123 323 201 HOH HOH . H 4 HOH B 124 324 174 HOH HOH . H 4 HOH B 125 325 196 HOH HOH . H 4 HOH B 126 326 107 HOH HOH . H 4 HOH B 127 327 209 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 6EH . . . C 2 -14.383 19.777 -5.559 1 32.54 ? C2 6EH 101 A 1 HETATM 2 C C3 6EH . . . C 2 -16.042 17.984 -4.879 1 31.85 ? C3 6EH 101 A 1 HETATM 3 C C11 6EH . . . C 2 -26.794 15.127 -4.637 1 23.72 ? C11 6EH 101 A 1 HETATM 4 C C12 6EH . . . C 2 -21.644 17.059 -3.079 1 22.21 ? C12 6EH 101 A 1 HETATM 5 C C13 6EH . . . C 2 -20.646 18.175 -3.028 1 22.19 ? C13 6EH 101 A 1 HETATM 6 C C15 6EH . . . C 2 -19.408 17.905 -2.481 1 22.39 ? C15 6EH 101 A 1 HETATM 7 C C18 6EH . . . C 2 -19.975 20.439 -3.365 1 24.75 ? C18 6EH 101 A 1 HETATM 8 C C20 6EH . . . C 2 -23.617 17.984 -1.785 1 24.78 ? C20 6EH 101 A 1 HETATM 9 C C21 6EH . . . C 2 -24.43 18.004 -0.664 1 21.83 ? C21 6EH 101 A 1 HETATM 10 C C22 6EH . . . C 2 -24.158 17.143 0.375 1 25.09 ? C22 6EH 101 A 1 HETATM 11 C C 6EH . . . C 2 -16.687 18.208 -6.231 1 31.85 ? C 6EH 101 A 1 HETATM 12 N N 6EH . . . C 2 -14.628 18.451 -4.916 1 32.49 ? N 6EH 101 A 1 HETATM 13 O O 6EH . . . C 2 -16.487 19.576 -6.621 1 34.33 ? O 6EH 101 A 1 HETATM 14 C C1 6EH . . . C 2 -15.098 19.779 -6.895 1 33.7 ? C1 6EH 101 A 1 HETATM 15 C C4 6EH . . . C 2 -21.335 16.398 -5.463 1 21.61 ? C4 6EH 101 A 1 HETATM 16 O O5 6EH . . . C 2 -20.828 15.282 -5.421 1 20.33 ? O5 6EH 101 A 1 HETATM 17 C C6 6EH . . . C 2 -22.325 16.863 -4.433 1 21.56 ? C6 6EH 101 A 1 HETATM 18 N N7 6EH . . . C 2 -23.32 15.806 -4.402 1 22.28 ? N7 6EH 101 A 1 HETATM 19 C C8 6EH . . . C 2 -24.657 16.092 -4.582 1 23.77 ? C8 6EH 101 A 1 HETATM 20 O O9 6EH . . . C 2 -25.112 17.205 -4.832 1 24.62 ? O9 6EH 101 A 1 HETATM 21 O O10 6EH . . . C 2 -25.389 14.94 -4.464 1 24.39 ? O10 6EH 101 A 1 HETATM 22 C C14 6EH . . . C 2 -22.549 17.108 -1.881 1 23.4 ? C14 6EH 101 A 1 HETATM 23 C C16 6EH . . . C 2 -18.44 18.881 -2.394 1 22.74 ? C16 6EH 101 A 1 HETATM 24 C C17 6EH . . . C 2 -18.732 20.15 -2.839 1 21.85 ? C17 6EH 101 A 1 HETATM 25 C C19 6EH . . . C 2 -20.937 19.454 -3.468 1 21.41 ? C19 6EH 101 A 1 HETATM 26 C C23 6EH . . . C 2 -23.086 16.273 0.294 1 26.55 ? C23 6EH 101 A 1 HETATM 27 C C24 6EH . . . C 2 -22.281 16.247 -0.831 1 24.41 ? C24 6EH 101 A 1 HETATM 28 N N25 6EH . . . C 2 -21.093 17.373 -6.416 1 23.98 ? N25 6EH 101 A 1 HETATM 29 C C26 6EH . . . C 2 -20.088 17.193 -7.451 1 26.29 ? C26 6EH 101 A 1 HETATM 30 C C27 6EH . . . C 2 -18.926 18.157 -7.34 1 27.83 ? C27 6EH 101 A 1 HETATM 31 C C28 6EH . . . C 2 -18.162 17.96 -6.048 1 28.66 ? C28 6EH 101 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #