data_5IVV # _model_server_result.job_id 7Cr3dcbSDYU0AL8LylhYLQ _model_server_result.datetime_utc '2024-11-07 05:50:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ivv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 5IVV # _exptl.entry_id 5IVV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.46 _cell.angle_gamma 90 _cell.entry_id 5IVV _cell.length_a 116.248 _cell.length_b 62.279 _cell.length_c 46.592 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IVV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 225 A HIS 483 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc2 A OE1 GLU 227 A GLU 485 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc3 A NE2 HIS 313 A HIS 571 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc4 B N07 6EN . A 6EN 601 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc5 C MN MN . A MN 602 1_555 D O HOH . A HOH 736 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc6 C MN MN . A MN 602 1_555 D O HOH . A HOH 852 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5IVV _atom_sites.fract_transf_matrix[1][1] 0.008602 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00037 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016057 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021483 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6EN A 1 601 1 6EN LIG . C 3 MN A 1 602 1 MN MN . D 4 HOH A 1 701 169 HOH HOH . D 4 HOH A 2 702 114 HOH HOH . D 4 HOH A 3 703 258 HOH HOH . D 4 HOH A 4 704 124 HOH HOH . D 4 HOH A 5 705 170 HOH HOH . D 4 HOH A 6 706 53 HOH HOH . D 4 HOH A 7 707 87 HOH HOH . D 4 HOH A 8 708 57 HOH HOH . D 4 HOH A 9 709 224 HOH HOH . D 4 HOH A 10 710 218 HOH HOH . D 4 HOH A 11 711 230 HOH HOH . D 4 HOH A 12 712 259 HOH HOH . D 4 HOH A 13 713 98 HOH HOH . D 4 HOH A 14 714 112 HOH HOH . D 4 HOH A 15 715 200 HOH HOH . D 4 HOH A 16 716 72 HOH HOH . D 4 HOH A 17 717 7 HOH HOH . D 4 HOH A 18 718 219 HOH HOH . D 4 HOH A 19 719 127 HOH HOH . D 4 HOH A 20 720 179 HOH HOH . D 4 HOH A 21 721 12 HOH HOH . D 4 HOH A 22 722 166 HOH HOH . D 4 HOH A 23 723 306 HOH HOH . D 4 HOH A 24 724 67 HOH HOH . D 4 HOH A 25 725 244 HOH HOH . D 4 HOH A 26 726 29 HOH HOH . D 4 HOH A 27 727 79 HOH HOH . D 4 HOH A 28 728 221 HOH HOH . D 4 HOH A 29 729 66 HOH HOH . D 4 HOH A 30 730 23 HOH HOH . D 4 HOH A 31 731 105 HOH HOH . D 4 HOH A 32 732 223 HOH HOH . D 4 HOH A 33 733 109 HOH HOH . D 4 HOH A 34 734 17 HOH HOH . D 4 HOH A 35 735 120 HOH HOH . D 4 HOH A 36 736 1 HOH HOH . D 4 HOH A 37 737 182 HOH HOH . D 4 HOH A 38 738 263 HOH HOH . D 4 HOH A 39 739 146 HOH HOH . D 4 HOH A 40 740 3 HOH HOH . D 4 HOH A 41 741 289 HOH HOH . D 4 HOH A 42 742 97 HOH HOH . D 4 HOH A 43 743 140 HOH HOH . D 4 HOH A 44 744 33 HOH HOH . D 4 HOH A 45 745 89 HOH HOH . D 4 HOH A 46 746 100 HOH HOH . D 4 HOH A 47 747 103 HOH HOH . D 4 HOH A 48 748 40 HOH HOH . D 4 HOH A 49 749 28 HOH HOH . D 4 HOH A 50 750 81 HOH HOH . D 4 HOH A 51 751 134 HOH HOH . D 4 HOH A 52 752 108 HOH HOH . D 4 HOH A 53 753 104 HOH HOH . D 4 HOH A 54 754 173 HOH HOH . D 4 HOH A 55 755 14 HOH HOH . D 4 HOH A 56 756 25 HOH HOH . D 4 HOH A 57 757 161 HOH HOH . D 4 HOH A 58 758 61 HOH HOH . D 4 HOH A 59 759 94 HOH HOH . D 4 HOH A 60 760 107 HOH HOH . D 4 HOH A 61 761 143 HOH HOH . D 4 HOH A 62 762 226 HOH HOH . D 4 HOH A 63 763 277 HOH HOH . D 4 HOH A 64 764 5 HOH HOH . D 4 HOH A 65 765 50 HOH HOH . D 4 HOH A 66 766 144 HOH HOH . D 4 HOH A 67 767 198 HOH HOH . D 4 HOH A 68 768 27 HOH HOH . D 4 HOH A 69 769 62 HOH HOH . D 4 HOH A 70 770 21 HOH HOH . D 4 HOH A 71 771 74 HOH HOH . D 4 HOH A 72 772 148 HOH HOH . D 4 HOH A 73 773 63 HOH HOH . D 4 HOH A 74 774 11 HOH HOH . D 4 HOH A 75 775 301 HOH HOH . D 4 HOH A 76 776 129 HOH HOH . D 4 HOH A 77 777 185 HOH HOH . D 4 HOH A 78 778 47 HOH HOH . D 4 HOH A 79 779 51 HOH HOH . D 4 HOH A 80 780 36 HOH HOH . D 4 HOH A 81 781 118 HOH HOH . D 4 HOH A 82 782 24 HOH HOH . D 4 HOH A 83 783 19 HOH HOH . D 4 HOH A 84 784 6 HOH HOH . D 4 HOH A 85 785 292 HOH HOH . D 4 HOH A 86 786 30 HOH HOH . D 4 HOH A 87 787 91 HOH HOH . D 4 HOH A 88 788 275 HOH HOH . D 4 HOH A 89 789 35 HOH HOH . D 4 HOH A 90 790 54 HOH HOH . D 4 HOH A 91 791 58 HOH HOH . D 4 HOH A 92 792 119 HOH HOH . D 4 HOH A 93 793 276 HOH HOH . D 4 HOH A 94 794 55 HOH HOH . D 4 HOH A 95 795 31 HOH HOH . D 4 HOH A 96 796 177 HOH HOH . D 4 HOH A 97 797 42 HOH HOH . D 4 HOH A 98 798 8 HOH HOH . D 4 HOH A 99 799 49 HOH HOH . D 4 HOH A 100 800 206 HOH HOH . D 4 HOH A 101 801 83 HOH HOH . D 4 HOH A 102 802 4 HOH HOH . D 4 HOH A 103 803 174 HOH HOH . D 4 HOH A 104 804 183 HOH HOH . D 4 HOH A 105 805 188 HOH HOH . D 4 HOH A 106 806 39 HOH HOH . D 4 HOH A 107 807 15 HOH HOH . D 4 HOH A 108 808 172 HOH HOH . D 4 HOH A 109 809 136 HOH HOH . D 4 HOH A 110 810 308 HOH HOH . D 4 HOH A 111 811 26 HOH HOH . D 4 HOH A 112 812 41 HOH HOH . D 4 HOH A 113 813 46 HOH HOH . D 4 HOH A 114 814 242 HOH HOH . D 4 HOH A 115 815 37 HOH HOH . D 4 HOH A 116 816 32 HOH HOH . D 4 HOH A 117 817 228 HOH HOH . D 4 HOH A 118 818 76 HOH HOH . D 4 HOH A 119 819 2 HOH HOH . D 4 HOH A 120 820 113 HOH HOH . D 4 HOH A 121 821 48 HOH HOH . D 4 HOH A 122 822 234 HOH HOH . D 4 HOH A 123 823 22 HOH HOH . D 4 HOH A 124 824 225 HOH HOH . D 4 HOH A 125 825 194 HOH HOH . D 4 HOH A 126 826 165 HOH HOH . D 4 HOH A 127 827 88 HOH HOH . D 4 HOH A 128 828 78 HOH HOH . D 4 HOH A 129 829 18 HOH HOH . D 4 HOH A 130 830 130 HOH HOH . D 4 HOH A 131 831 90 HOH HOH . D 4 HOH A 132 832 151 HOH HOH . D 4 HOH A 133 833 70 HOH HOH . D 4 HOH A 134 834 43 HOH HOH . D 4 HOH A 135 835 268 HOH HOH . D 4 HOH A 136 836 9 HOH HOH . D 4 HOH A 137 837 75 HOH HOH . D 4 HOH A 138 838 145 HOH HOH . D 4 HOH A 139 839 305 HOH HOH . D 4 HOH A 140 840 307 HOH HOH . D 4 HOH A 141 841 147 HOH HOH . D 4 HOH A 142 842 162 HOH HOH . D 4 HOH A 143 843 220 HOH HOH . D 4 HOH A 144 844 111 HOH HOH . D 4 HOH A 145 845 56 HOH HOH . D 4 HOH A 146 846 93 HOH HOH . D 4 HOH A 147 847 184 HOH HOH . D 4 HOH A 148 848 133 HOH HOH . D 4 HOH A 149 849 229 HOH HOH . D 4 HOH A 150 850 176 HOH HOH . D 4 HOH A 151 851 132 HOH HOH . D 4 HOH A 152 852 20 HOH HOH . D 4 HOH A 153 853 187 HOH HOH . D 4 HOH A 154 854 137 HOH HOH . D 4 HOH A 155 855 86 HOH HOH . D 4 HOH A 156 856 149 HOH HOH . D 4 HOH A 157 857 110 HOH HOH . D 4 HOH A 158 858 126 HOH HOH . D 4 HOH A 159 859 65 HOH HOH . D 4 HOH A 160 860 202 HOH HOH . D 4 HOH A 161 861 222 HOH HOH . D 4 HOH A 162 862 69 HOH HOH . D 4 HOH A 163 863 282 HOH HOH . D 4 HOH A 164 864 236 HOH HOH . D 4 HOH A 165 865 189 HOH HOH . D 4 HOH A 166 866 10 HOH HOH . D 4 HOH A 167 867 92 HOH HOH . D 4 HOH A 168 868 13 HOH HOH . D 4 HOH A 169 869 159 HOH HOH . D 4 HOH A 170 870 309 HOH HOH . D 4 HOH A 171 871 16 HOH HOH . D 4 HOH A 172 872 190 HOH HOH . D 4 HOH A 173 873 52 HOH HOH . D 4 HOH A 174 874 304 HOH HOH . D 4 HOH A 175 875 257 HOH HOH . D 4 HOH A 176 876 101 HOH HOH . D 4 HOH A 177 877 208 HOH HOH . D 4 HOH A 178 878 158 HOH HOH . D 4 HOH A 179 879 142 HOH HOH . D 4 HOH A 180 880 164 HOH HOH . D 4 HOH A 181 881 284 HOH HOH . D 4 HOH A 182 882 272 HOH HOH . D 4 HOH A 183 883 180 HOH HOH . D 4 HOH A 184 884 199 HOH HOH . D 4 HOH A 185 885 163 HOH HOH . D 4 HOH A 186 886 207 HOH HOH . D 4 HOH A 187 887 310 HOH HOH . D 4 HOH A 188 888 80 HOH HOH . D 4 HOH A 189 889 64 HOH HOH . D 4 HOH A 190 890 311 HOH HOH . D 4 HOH A 191 891 44 HOH HOH . D 4 HOH A 192 892 201 HOH HOH . D 4 HOH A 193 893 84 HOH HOH . D 4 HOH A 194 894 122 HOH HOH . D 4 HOH A 195 895 34 HOH HOH . D 4 HOH A 196 896 96 HOH HOH . D 4 HOH A 197 897 139 HOH HOH . D 4 HOH A 198 898 153 HOH HOH . D 4 HOH A 199 899 60 HOH HOH . D 4 HOH A 200 900 123 HOH HOH . D 4 HOH A 201 901 131 HOH HOH . D 4 HOH A 202 902 68 HOH HOH . D 4 HOH A 203 903 254 HOH HOH . D 4 HOH A 204 904 116 HOH HOH . D 4 HOH A 205 905 243 HOH HOH . D 4 HOH A 206 906 141 HOH HOH . D 4 HOH A 207 907 247 HOH HOH . D 4 HOH A 208 908 82 HOH HOH . D 4 HOH A 209 909 99 HOH HOH . D 4 HOH A 210 910 302 HOH HOH . D 4 HOH A 211 911 171 HOH HOH . D 4 HOH A 212 912 216 HOH HOH . D 4 HOH A 213 913 150 HOH HOH . D 4 HOH A 214 914 315 HOH HOH . D 4 HOH A 215 915 181 HOH HOH . D 4 HOH A 216 916 245 HOH HOH . D 4 HOH A 217 917 261 HOH HOH . D 4 HOH A 218 918 156 HOH HOH . D 4 HOH A 219 919 160 HOH HOH . D 4 HOH A 220 920 204 HOH HOH . D 4 HOH A 221 921 290 HOH HOH . D 4 HOH A 222 922 205 HOH HOH . D 4 HOH A 223 923 197 HOH HOH . D 4 HOH A 224 924 168 HOH HOH . D 4 HOH A 225 925 191 HOH HOH . D 4 HOH A 226 926 85 HOH HOH . D 4 HOH A 227 927 250 HOH HOH . D 4 HOH A 228 928 294 HOH HOH . D 4 HOH A 229 929 287 HOH HOH . D 4 HOH A 230 930 115 HOH HOH . D 4 HOH A 231 931 256 HOH HOH . D 4 HOH A 232 932 175 HOH HOH . D 4 HOH A 233 933 121 HOH HOH . D 4 HOH A 234 934 288 HOH HOH . D 4 HOH A 235 935 214 HOH HOH . D 4 HOH A 236 936 59 HOH HOH . D 4 HOH A 237 937 262 HOH HOH . D 4 HOH A 238 938 238 HOH HOH . D 4 HOH A 239 939 152 HOH HOH . D 4 HOH A 240 940 251 HOH HOH . D 4 HOH A 241 941 278 HOH HOH . D 4 HOH A 242 942 300 HOH HOH . D 4 HOH A 243 943 77 HOH HOH . D 4 HOH A 244 944 128 HOH HOH . D 4 HOH A 245 945 281 HOH HOH . D 4 HOH A 246 946 264 HOH HOH . D 4 HOH A 247 947 270 HOH HOH . D 4 HOH A 248 948 45 HOH HOH . D 4 HOH A 249 949 248 HOH HOH . D 4 HOH A 250 950 138 HOH HOH . D 4 HOH A 251 951 215 HOH HOH . D 4 HOH A 252 952 280 HOH HOH . D 4 HOH A 253 953 210 HOH HOH . D 4 HOH A 254 954 125 HOH HOH . D 4 HOH A 255 955 38 HOH HOH . D 4 HOH A 256 956 213 HOH HOH . D 4 HOH A 257 957 157 HOH HOH . D 4 HOH A 258 958 291 HOH HOH . D 4 HOH A 259 959 195 HOH HOH . D 4 HOH A 260 960 296 HOH HOH . D 4 HOH A 261 961 217 HOH HOH . D 4 HOH A 262 962 303 HOH HOH . D 4 HOH A 263 963 117 HOH HOH . D 4 HOH A 264 964 260 HOH HOH . D 4 HOH A 265 965 295 HOH HOH . D 4 HOH A 266 966 237 HOH HOH . D 4 HOH A 267 967 249 HOH HOH . D 4 HOH A 268 968 102 HOH HOH . D 4 HOH A 269 969 203 HOH HOH . D 4 HOH A 270 970 314 HOH HOH . D 4 HOH A 271 971 283 HOH HOH . D 4 HOH A 272 972 235 HOH HOH . D 4 HOH A 273 973 255 HOH HOH . D 4 HOH A 274 974 313 HOH HOH . D 4 HOH A 275 975 293 HOH HOH . D 4 HOH A 276 976 241 HOH HOH . D 4 HOH A 277 977 273 HOH HOH . D 4 HOH A 278 978 209 HOH HOH . D 4 HOH A 279 979 253 HOH HOH . D 4 HOH A 280 980 298 HOH HOH . D 4 HOH A 281 981 193 HOH HOH . D 4 HOH A 282 982 106 HOH HOH . D 4 HOH A 283 983 233 HOH HOH . D 4 HOH A 284 984 239 HOH HOH . D 4 HOH A 285 985 246 HOH HOH . D 4 HOH A 286 986 227 HOH HOH . D 4 HOH A 287 987 155 HOH HOH . D 4 HOH A 288 988 285 HOH HOH . D 4 HOH A 289 989 178 HOH HOH . D 4 HOH A 290 990 71 HOH HOH . D 4 HOH A 291 991 240 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -23.547 _atom_site.Cartn_y 17.326 _atom_site.Cartn_z 1.396 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 602 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #