data_5IVY # _model_server_result.job_id e-SUwQGVu78Wz1lAMxvMuA _model_server_result.datetime_utc '2024-11-27 06:08:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ivy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 5IVY # _exptl.entry_id 5IVY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.53 _cell.angle_gamma 90 _cell.entry_id 5IVY _cell.length_a 116.923 _cell.length_b 62.463 _cell.length_c 46.743 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IVY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 225 A HIS 483 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc2 A OE1 GLU 227 A GLU 485 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc3 A NE2 HIS 313 A HIS 571 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc4 B N18 6EO . A 6EO 601 1_555 C MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc5 C MN MN . A MN 602 1_555 D O HOH . A HOH 755 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc6 C MN MN . A MN 602 1_555 D O HOH . A HOH 832 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5IVY _atom_sites.fract_transf_matrix[1][1] 0.008553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000378 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016009 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021414 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6EO A 1 601 1 6EO LIG . C 3 MN A 1 602 1 MN MN . D 4 HOH A 1 701 160 HOH HOH . D 4 HOH A 2 702 288 HOH HOH . D 4 HOH A 3 703 233 HOH HOH . D 4 HOH A 4 704 285 HOH HOH . D 4 HOH A 5 705 154 HOH HOH . D 4 HOH A 6 706 293 HOH HOH . D 4 HOH A 7 707 35 HOH HOH . D 4 HOH A 8 708 215 HOH HOH . D 4 HOH A 9 709 269 HOH HOH . D 4 HOH A 10 710 292 HOH HOH . D 4 HOH A 11 711 105 HOH HOH . D 4 HOH A 12 712 26 HOH HOH . D 4 HOH A 13 713 192 HOH HOH . D 4 HOH A 14 714 166 HOH HOH . D 4 HOH A 15 715 188 HOH HOH . D 4 HOH A 16 716 3 HOH HOH . D 4 HOH A 17 717 165 HOH HOH . D 4 HOH A 18 718 159 HOH HOH . D 4 HOH A 19 719 237 HOH HOH . D 4 HOH A 20 720 179 HOH HOH . D 4 HOH A 21 721 267 HOH HOH . D 4 HOH A 22 722 118 HOH HOH . D 4 HOH A 23 723 24 HOH HOH . D 4 HOH A 24 724 239 HOH HOH . D 4 HOH A 25 725 175 HOH HOH . D 4 HOH A 26 726 106 HOH HOH . D 4 HOH A 27 727 257 HOH HOH . D 4 HOH A 28 728 56 HOH HOH . D 4 HOH A 29 729 19 HOH HOH . D 4 HOH A 30 730 76 HOH HOH . D 4 HOH A 31 731 48 HOH HOH . D 4 HOH A 32 732 210 HOH HOH . D 4 HOH A 33 733 29 HOH HOH . D 4 HOH A 34 734 104 HOH HOH . D 4 HOH A 35 735 241 HOH HOH . D 4 HOH A 36 736 115 HOH HOH . D 4 HOH A 37 737 164 HOH HOH . D 4 HOH A 38 738 259 HOH HOH . D 4 HOH A 39 739 27 HOH HOH . D 4 HOH A 40 740 161 HOH HOH . D 4 HOH A 41 741 70 HOH HOH . D 4 HOH A 42 742 71 HOH HOH . D 4 HOH A 43 743 7 HOH HOH . D 4 HOH A 44 744 28 HOH HOH . D 4 HOH A 45 745 294 HOH HOH . D 4 HOH A 46 746 16 HOH HOH . D 4 HOH A 47 747 38 HOH HOH . D 4 HOH A 48 748 62 HOH HOH . D 4 HOH A 49 749 129 HOH HOH . D 4 HOH A 50 750 9 HOH HOH . D 4 HOH A 51 751 17 HOH HOH . D 4 HOH A 52 752 44 HOH HOH . D 4 HOH A 53 753 69 HOH HOH . D 4 HOH A 54 754 66 HOH HOH . D 4 HOH A 55 755 49 HOH HOH . D 4 HOH A 56 756 145 HOH HOH . D 4 HOH A 57 757 168 HOH HOH . D 4 HOH A 58 758 218 HOH HOH . D 4 HOH A 59 759 39 HOH HOH . D 4 HOH A 60 760 289 HOH HOH . D 4 HOH A 61 761 220 HOH HOH . D 4 HOH A 62 762 20 HOH HOH . D 4 HOH A 63 763 10 HOH HOH . D 4 HOH A 64 764 25 HOH HOH . D 4 HOH A 65 765 81 HOH HOH . D 4 HOH A 66 766 107 HOH HOH . D 4 HOH A 67 767 84 HOH HOH . D 4 HOH A 68 768 200 HOH HOH . D 4 HOH A 69 769 121 HOH HOH . D 4 HOH A 70 770 127 HOH HOH . D 4 HOH A 71 771 2 HOH HOH . D 4 HOH A 72 772 86 HOH HOH . D 4 HOH A 73 773 176 HOH HOH . D 4 HOH A 74 774 232 HOH HOH . D 4 HOH A 75 775 128 HOH HOH . D 4 HOH A 76 776 22 HOH HOH . D 4 HOH A 77 777 30 HOH HOH . D 4 HOH A 78 778 5 HOH HOH . D 4 HOH A 79 779 108 HOH HOH . D 4 HOH A 80 780 112 HOH HOH . D 4 HOH A 81 781 109 HOH HOH . D 4 HOH A 82 782 96 HOH HOH . D 4 HOH A 83 783 50 HOH HOH . D 4 HOH A 84 784 8 HOH HOH . D 4 HOH A 85 785 284 HOH HOH . D 4 HOH A 86 786 72 HOH HOH . D 4 HOH A 87 787 206 HOH HOH . D 4 HOH A 88 788 4 HOH HOH . D 4 HOH A 89 789 42 HOH HOH . D 4 HOH A 90 790 89 HOH HOH . D 4 HOH A 91 791 15 HOH HOH . D 4 HOH A 92 792 55 HOH HOH . D 4 HOH A 93 793 114 HOH HOH . D 4 HOH A 94 794 1 HOH HOH . D 4 HOH A 95 795 79 HOH HOH . D 4 HOH A 96 796 46 HOH HOH . D 4 HOH A 97 797 119 HOH HOH . D 4 HOH A 98 798 101 HOH HOH . D 4 HOH A 99 799 18 HOH HOH . D 4 HOH A 100 800 99 HOH HOH . D 4 HOH A 101 801 80 HOH HOH . D 4 HOH A 102 802 52 HOH HOH . D 4 HOH A 103 803 40 HOH HOH . D 4 HOH A 104 804 205 HOH HOH . D 4 HOH A 105 805 51 HOH HOH . D 4 HOH A 106 806 102 HOH HOH . D 4 HOH A 107 807 57 HOH HOH . D 4 HOH A 108 808 92 HOH HOH . D 4 HOH A 109 809 286 HOH HOH . D 4 HOH A 110 810 36 HOH HOH . D 4 HOH A 111 811 183 HOH HOH . D 4 HOH A 112 812 58 HOH HOH . D 4 HOH A 113 813 110 HOH HOH . D 4 HOH A 114 814 63 HOH HOH . D 4 HOH A 115 815 65 HOH HOH . D 4 HOH A 116 816 264 HOH HOH . D 4 HOH A 117 817 13 HOH HOH . D 4 HOH A 118 818 43 HOH HOH . D 4 HOH A 119 819 6 HOH HOH . D 4 HOH A 120 820 75 HOH HOH . D 4 HOH A 121 821 201 HOH HOH . D 4 HOH A 122 822 100 HOH HOH . D 4 HOH A 123 823 64 HOH HOH . D 4 HOH A 124 824 111 HOH HOH . D 4 HOH A 125 825 156 HOH HOH . D 4 HOH A 126 826 141 HOH HOH . D 4 HOH A 127 827 12 HOH HOH . D 4 HOH A 128 828 135 HOH HOH . D 4 HOH A 129 829 34 HOH HOH . D 4 HOH A 130 830 45 HOH HOH . D 4 HOH A 131 831 152 HOH HOH . D 4 HOH A 132 832 142 HOH HOH . D 4 HOH A 133 833 244 HOH HOH . D 4 HOH A 134 834 85 HOH HOH . D 4 HOH A 135 835 32 HOH HOH . D 4 HOH A 136 836 123 HOH HOH . D 4 HOH A 137 837 73 HOH HOH . D 4 HOH A 138 838 33 HOH HOH . D 4 HOH A 139 839 14 HOH HOH . D 4 HOH A 140 840 216 HOH HOH . D 4 HOH A 141 841 23 HOH HOH . D 4 HOH A 142 842 178 HOH HOH . D 4 HOH A 143 843 11 HOH HOH . D 4 HOH A 144 844 31 HOH HOH . D 4 HOH A 145 845 68 HOH HOH . D 4 HOH A 146 846 131 HOH HOH . D 4 HOH A 147 847 130 HOH HOH . D 4 HOH A 148 848 134 HOH HOH . D 4 HOH A 149 849 196 HOH HOH . D 4 HOH A 150 850 117 HOH HOH . D 4 HOH A 151 851 126 HOH HOH . D 4 HOH A 152 852 223 HOH HOH . D 4 HOH A 153 853 295 HOH HOH . D 4 HOH A 154 854 173 HOH HOH . D 4 HOH A 155 855 125 HOH HOH . D 4 HOH A 156 856 74 HOH HOH . D 4 HOH A 157 857 54 HOH HOH . D 4 HOH A 158 858 193 HOH HOH . D 4 HOH A 159 859 162 HOH HOH . D 4 HOH A 160 860 140 HOH HOH . D 4 HOH A 161 861 120 HOH HOH . D 4 HOH A 162 862 91 HOH HOH . D 4 HOH A 163 863 224 HOH HOH . D 4 HOH A 164 864 170 HOH HOH . D 4 HOH A 165 865 274 HOH HOH . D 4 HOH A 166 866 203 HOH HOH . D 4 HOH A 167 867 98 HOH HOH . D 4 HOH A 168 868 212 HOH HOH . D 4 HOH A 169 869 272 HOH HOH . D 4 HOH A 170 870 82 HOH HOH . D 4 HOH A 171 871 254 HOH HOH . D 4 HOH A 172 872 90 HOH HOH . D 4 HOH A 173 873 122 HOH HOH . D 4 HOH A 174 874 287 HOH HOH . D 4 HOH A 175 875 279 HOH HOH . D 4 HOH A 176 876 290 HOH HOH . D 4 HOH A 177 877 21 HOH HOH . D 4 HOH A 178 878 184 HOH HOH . D 4 HOH A 179 879 37 HOH HOH . D 4 HOH A 180 880 280 HOH HOH . D 4 HOH A 181 881 136 HOH HOH . D 4 HOH A 182 882 103 HOH HOH . D 4 HOH A 183 883 227 HOH HOH . D 4 HOH A 184 884 61 HOH HOH . D 4 HOH A 185 885 60 HOH HOH . D 4 HOH A 186 886 83 HOH HOH . D 4 HOH A 187 887 296 HOH HOH . D 4 HOH A 188 888 137 HOH HOH . D 4 HOH A 189 889 78 HOH HOH . D 4 HOH A 190 890 124 HOH HOH . D 4 HOH A 191 891 94 HOH HOH . D 4 HOH A 192 892 217 HOH HOH . D 4 HOH A 193 893 187 HOH HOH . D 4 HOH A 194 894 291 HOH HOH . D 4 HOH A 195 895 190 HOH HOH . D 4 HOH A 196 896 253 HOH HOH . D 4 HOH A 197 897 171 HOH HOH . D 4 HOH A 198 898 214 HOH HOH . D 4 HOH A 199 899 147 HOH HOH . D 4 HOH A 200 900 174 HOH HOH . D 4 HOH A 201 901 260 HOH HOH . D 4 HOH A 202 902 113 HOH HOH . D 4 HOH A 203 903 240 HOH HOH . D 4 HOH A 204 904 172 HOH HOH . D 4 HOH A 205 905 185 HOH HOH . D 4 HOH A 206 906 204 HOH HOH . D 4 HOH A 207 907 155 HOH HOH . D 4 HOH A 208 908 132 HOH HOH . D 4 HOH A 209 909 97 HOH HOH . D 4 HOH A 210 910 195 HOH HOH . D 4 HOH A 211 911 144 HOH HOH . D 4 HOH A 212 912 221 HOH HOH . D 4 HOH A 213 913 143 HOH HOH . D 4 HOH A 214 914 228 HOH HOH . D 4 HOH A 215 915 138 HOH HOH . D 4 HOH A 216 916 207 HOH HOH . D 4 HOH A 217 917 234 HOH HOH . D 4 HOH A 218 918 198 HOH HOH . D 4 HOH A 219 919 163 HOH HOH . D 4 HOH A 220 920 199 HOH HOH . D 4 HOH A 221 921 182 HOH HOH . D 4 HOH A 222 922 186 HOH HOH . D 4 HOH A 223 923 53 HOH HOH . D 4 HOH A 224 924 238 HOH HOH . D 4 HOH A 225 925 250 HOH HOH . D 4 HOH A 226 926 255 HOH HOH . D 4 HOH A 227 927 169 HOH HOH . D 4 HOH A 228 928 67 HOH HOH . D 4 HOH A 229 929 213 HOH HOH . D 4 HOH A 230 930 151 HOH HOH . D 4 HOH A 231 931 197 HOH HOH . D 4 HOH A 232 932 202 HOH HOH . D 4 HOH A 233 933 208 HOH HOH . D 4 HOH A 234 934 266 HOH HOH . D 4 HOH A 235 935 235 HOH HOH . D 4 HOH A 236 936 194 HOH HOH . D 4 HOH A 237 937 191 HOH HOH . D 4 HOH A 238 938 230 HOH HOH . D 4 HOH A 239 939 282 HOH HOH . D 4 HOH A 240 940 225 HOH HOH . D 4 HOH A 241 941 222 HOH HOH . D 4 HOH A 242 942 251 HOH HOH . D 4 HOH A 243 943 270 HOH HOH . D 4 HOH A 244 944 236 HOH HOH . D 4 HOH A 245 945 41 HOH HOH . D 4 HOH A 246 946 95 HOH HOH . D 4 HOH A 247 947 265 HOH HOH . D 4 HOH A 248 948 258 HOH HOH . D 4 HOH A 249 949 219 HOH HOH . D 4 HOH A 250 950 77 HOH HOH . D 4 HOH A 251 951 116 HOH HOH . D 4 HOH A 252 952 248 HOH HOH . D 4 HOH A 253 953 93 HOH HOH . D 4 HOH A 254 954 249 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -23.782 _atom_site.Cartn_y 17.372 _atom_site.Cartn_z 1.264 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.17 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 602 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #