data_5IXC # _model_server_result.job_id vMzndBcnxkV22A4_xDWrRQ _model_server_result.datetime_utc '2024-11-05 00:41:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ixc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":904}' # _entry.id 5IXC # _exptl.entry_id 5IXC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 137.327 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BARIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5IXC _cell.length_a 100.567 _cell.length_b 111.379 _cell.length_c 157.645 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IXC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 167 A CYS 163 1_555 A SG CYS 278 A CYS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? disulf ? disulf2 B SG CYS 167 B CYS 163 1_555 B SG CYS 278 B CYS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? covale ? covale1 A OG SER 365 A SER 361 1_555 C P1 7FA . A 7FA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.602 ? covale ? covale2 B OG SER 365 B SER 361 1_555 G P1 7FA . B 7FA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.591 ? metalc ? metalc1 A OG SER 45 A SER 41 1_555 E BA BA . A BA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc2 A O GLU 46 A GLU 42 1_555 E BA BA . A BA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc3 A OD1 ASP 48 A ASP 44 1_555 E BA BA . A BA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.936 ? metalc ? metalc4 A OD2 ASP 48 A ASP 44 1_555 E BA BA . A BA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.133 ? metalc ? metalc5 A OD1 ASP 70 A ASP 66 1_555 E BA BA . A BA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.438 ? metalc ? metalc6 A O ASP 100 A ASP 96 1_555 F BA BA . A BA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.198 ? metalc ? metalc7 A O THR 103 A THR 99 1_555 F BA BA . A BA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc8 A OD2 ASP 105 A ASP 101 1_555 F BA BA . A BA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.262 ? metalc ? metalc9 A OD2 ASP 169 A ASP 165 1_555 D BA BA . A BA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.056 ? metalc ? metalc10 A OD1 ASP 169 A ASP 165 1_555 H BA BA . B BA 902 3_547 ? ? ? ? ? ? ? ? ? ? ? ? 3.392 ? metalc ? metalc11 A OD2 ASP 169 A ASP 165 1_555 H BA BA . B BA 902 3_547 ? ? ? ? ? ? ? ? ? ? ? ? 2.813 ? metalc ? metalc12 D BA BA . A BA 902 3_557 B OD2 ASP 169 B ASP 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc13 B OG SER 45 B SER 41 1_555 I BA BA . B BA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.957 ? metalc ? metalc14 B O GLU 46 B GLU 42 1_555 I BA BA . B BA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? metalc ? metalc15 B OD1 ASP 48 B ASP 44 1_555 I BA BA . B BA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.071 ? metalc ? metalc16 B OD2 ASP 48 B ASP 44 1_555 I BA BA . B BA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.23 ? metalc ? metalc17 B OD1 ASP 70 B ASP 66 1_555 I BA BA . B BA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.485 ? metalc ? metalc18 B O ASP 100 B ASP 96 1_555 J BA BA . B BA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.835 ? metalc ? metalc19 B O THR 103 B THR 99 1_555 J BA BA . B BA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? metalc ? metalc20 B OD2 ASP 105 B ASP 101 1_555 J BA BA . B BA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.201 ? metalc ? metalc21 B OD2 ASP 169 B ASP 165 1_555 H BA BA . B BA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc22 I BA BA . B BA 903 1_555 L O HOH . B HOH 1032 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? # _chem_comp.formula 'Ba 2' _chem_comp.formula_weight 137.327 _chem_comp.id BA _chem_comp.mon_nstd_flag . _chem_comp.name 'BARIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5IXC _atom_sites.fract_transf_matrix[1][1] 0.009944 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006343 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 7FA A 1 901 999 7FA MLF . D 3 BA A 1 902 1000 BA BA . E 3 BA A 1 903 1001 BA BA . F 3 BA A 1 904 1002 BA BA . G 2 7FA B 1 901 999 7FA MLF . H 3 BA B 1 902 1000 BA BA . I 3 BA B 1 903 1001 BA BA . J 3 BA B 1 904 1002 BA BA . K 4 HOH A 1 1001 56 HOH HOH . K 4 HOH A 2 1002 60 HOH HOH . K 4 HOH A 3 1003 58 HOH HOH . K 4 HOH A 4 1004 59 HOH HOH . K 4 HOH A 5 1005 32 HOH HOH . K 4 HOH A 6 1006 54 HOH HOH . K 4 HOH A 7 1007 1 HOH HOH . K 4 HOH A 8 1008 55 HOH HOH . K 4 HOH A 9 1009 22 HOH HOH . K 4 HOH A 10 1010 33 HOH HOH . K 4 HOH A 11 1011 57 HOH HOH . K 4 HOH A 12 1012 34 HOH HOH . K 4 HOH A 13 1013 25 HOH HOH . K 4 HOH A 14 1014 63 HOH HOH . K 4 HOH A 15 1015 4 HOH HOH . K 4 HOH A 16 1016 35 HOH HOH . K 4 HOH A 17 1017 21 HOH HOH . K 4 HOH A 18 1018 15 HOH HOH . K 4 HOH A 19 1019 62 HOH HOH . K 4 HOH A 20 1020 73 HOH HOH . K 4 HOH A 21 1021 61 HOH HOH . K 4 HOH A 22 1022 72 HOH HOH . L 4 HOH B 1 1001 39 HOH HOH . L 4 HOH B 2 1002 11 HOH HOH . L 4 HOH B 3 1003 23 HOH HOH . L 4 HOH B 4 1004 19 HOH HOH . L 4 HOH B 5 1005 68 HOH HOH . L 4 HOH B 6 1006 18 HOH HOH . L 4 HOH B 7 1007 5 HOH HOH . L 4 HOH B 8 1008 47 HOH HOH . L 4 HOH B 9 1009 28 HOH HOH . L 4 HOH B 10 1010 38 HOH HOH . L 4 HOH B 11 1011 20 HOH HOH . L 4 HOH B 12 1012 2 HOH HOH . L 4 HOH B 13 1013 52 HOH HOH . L 4 HOH B 14 1014 45 HOH HOH . L 4 HOH B 15 1015 46 HOH HOH . L 4 HOH B 16 1016 43 HOH HOH . L 4 HOH B 17 1017 8 HOH HOH . L 4 HOH B 18 1018 49 HOH HOH . L 4 HOH B 19 1019 40 HOH HOH . L 4 HOH B 20 1020 3 HOH HOH . L 4 HOH B 21 1021 7 HOH HOH . L 4 HOH B 22 1022 31 HOH HOH . L 4 HOH B 23 1023 70 HOH HOH . L 4 HOH B 24 1024 67 HOH HOH . L 4 HOH B 25 1025 48 HOH HOH . L 4 HOH B 26 1026 16 HOH HOH . L 4 HOH B 27 1027 24 HOH HOH . L 4 HOH B 28 1028 44 HOH HOH . L 4 HOH B 29 1029 10 HOH HOH . L 4 HOH B 30 1030 53 HOH HOH . L 4 HOH B 31 1031 64 HOH HOH . L 4 HOH B 32 1032 30 HOH HOH . L 4 HOH B 33 1033 69 HOH HOH . L 4 HOH B 34 1034 37 HOH HOH . L 4 HOH B 35 1035 14 HOH HOH . L 4 HOH B 36 1036 66 HOH HOH . L 4 HOH B 37 1037 6 HOH HOH . L 4 HOH B 38 1038 50 HOH HOH . L 4 HOH B 39 1039 17 HOH HOH . L 4 HOH B 40 1040 26 HOH HOH . L 4 HOH B 41 1041 36 HOH HOH . L 4 HOH B 42 1042 71 HOH HOH . L 4 HOH B 43 1043 9 HOH HOH . L 4 HOH B 44 1044 51 HOH HOH . L 4 HOH B 45 1045 12 HOH HOH . L 4 HOH B 46 1046 42 HOH HOH . L 4 HOH B 47 1047 65 HOH HOH . L 4 HOH B 48 1048 41 HOH HOH . L 4 HOH B 49 1049 27 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BA _atom_site.label_atom_id BA _atom_site.label_comp_id BA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x 38.699 _atom_site.Cartn_y 94.299 _atom_site.Cartn_z 213.346 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 152.17 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BA _atom_site.auth_comp_id BA _atom_site.auth_seq_id 904 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #