data_5IY0 # _model_server_result.job_id 9zBWNDEEn1saiIweG6mXvw _model_server_result.datetime_utc '2024-10-19 17:21:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5iy0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":301}' # _entry.id 5IY0 # _exptl.entry_id 5IY0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.35 _cell.angle_gamma 90 _cell.entry_id 5IY0 _cell.length_a 211.427 _cell.length_b 122.61 _cell.length_c 111.892 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IY0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 140 A CYS 139 1_555 G ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc2 A SG CYS 143 A CYS 142 1_555 G ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc3 A SG CYS 163 A CYS 162 1_555 G ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc4 A SG CYS 166 A CYS 165 1_555 G ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc5 B SG CYS 140 B CYS 139 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc6 B SG CYS 143 B CYS 142 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc7 B SG CYS 163 B CYS 162 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc8 B SG CYS 166 B CYS 165 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc9 C SG CYS 140 C CYS 139 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc10 C SG CYS 143 C CYS 142 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc11 C SG CYS 163 C CYS 162 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc12 C SG CYS 166 C CYS 165 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc13 D SG CYS 140 D CYS 139 1_555 J ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc14 D SG CYS 143 D CYS 142 1_555 J ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc15 D SG CYS 163 D CYS 162 1_555 J ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc16 D SG CYS 166 D CYS 165 1_555 J ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc17 E SG CYS 140 E CYS 139 1_555 K ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc18 E SG CYS 143 E CYS 142 1_555 K ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc19 E SG CYS 163 E CYS 162 1_555 K ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc20 E SG CYS 166 E CYS 165 1_555 K ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc21 F SG CYS 140 F CYS 139 1_555 L ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc22 F SG CYS 143 F CYS 142 1_555 L ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc23 F SG CYS 163 F CYS 162 1_555 L ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc24 F SG CYS 166 F CYS 165 1_555 L ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5IY0 _atom_sites.fract_transf_matrix[1][1] 0.00473 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000194 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008945 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ZN A 1 301 301 ZN ZN2 . H 2 ZN B 1 301 301 ZN ZN2 . I 2 ZN C 1 301 301 ZN ZN2 . J 2 ZN D 1 301 301 ZN ZN2 . K 2 ZN E 1 301 301 ZN ZN2 . L 2 ZN F 1 301 301 ZN ZN2 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 2 _atom_site.Cartn_x -14.316 _atom_site.Cartn_y 94.255 _atom_site.Cartn_z 3.175 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 72.23 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id F _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #