data_5IYT # _model_server_result.job_id 6Y0T6JAfRbyihtQZQDk9bg _model_server_result.datetime_utc '2025-01-03 12:18:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5iyt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 5IYT # _exptl.entry_id 5IYT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 322.403 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-Ethyl 4-((1-cycloheptyl-1,2-dihydropyrazol-3-one-5-yl)-amino)-4-oxo-butanamide' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.73 _cell.angle_gamma 90 _cell.entry_id 5IYT _cell.length_a 57.46 _cell.length_b 52.33 _cell.length_c 62.27 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IYT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D 1 1 B,C,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 149 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 147 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C26 _struct_conn.ptnr2_label_comp_id NZN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id NZN _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.79 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H26 N4 O3' _chem_comp.formula_weight 322.403 _chem_comp.id NZN _chem_comp.mon_nstd_flag . _chem_comp.name 'N-Ethyl 4-((1-cycloheptyl-1,2-dihydropyrazol-3-one-5-yl)-amino)-4-oxo-butanamide' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C27 NZN sing 237 n n C26 C23 NZN sing 238 n n N29 C30 NZN sing 239 n n N29 C27 NZN sing 240 n n C30 C31 NZN sing 241 n n C27 O28 NZN doub 242 n n C23 C22 NZN sing 243 n n O24 C22 NZN doub 244 n n C22 N21 NZN sing 245 n n N21 C16 NZN sing 246 n n C4 C3 NZN sing 247 n n C4 C5 NZN sing 248 n n C16 N15 NZN sing 249 n n C16 C17 NZN doub 250 n n C2 C3 NZN sing 251 n n C2 C1 NZN sing 252 n n C7 C1 NZN sing 253 n n C7 C6 NZN sing 254 n n C3 N15 NZN sing 255 n n N15 N19 NZN sing 256 n n C5 C6 NZN sing 257 n n C17 C18 NZN sing 258 n n C18 N19 NZN sing 259 n n C18 O20 NZN doub 260 n n N29 H1 NZN sing 261 n n C30 H2 NZN sing 262 n n C30 H3 NZN sing 263 n n C31 H4 NZN sing 264 n n C31 H5 NZN sing 265 n n C31 H6 NZN sing 266 n n C26 H7 NZN sing 267 n n C26 H8 NZN sing 268 n n C23 H9 NZN sing 269 n n C23 H10 NZN sing 270 n n N21 H11 NZN sing 271 n n C17 H12 NZN sing 272 n n N19 H13 NZN sing 273 n n C3 H14 NZN sing 274 n n C2 H15 NZN sing 275 n n C2 H16 NZN sing 276 n n C4 H17 NZN sing 277 n n C4 H18 NZN sing 278 n n C5 H19 NZN sing 279 n n C5 H20 NZN sing 280 n n C6 H21 NZN sing 281 n n C6 H22 NZN sing 282 n n C7 H23 NZN sing 283 n n C7 H24 NZN sing 284 n n C1 H25 NZN sing 285 n n C1 H26 NZN sing 286 n n # _atom_sites.entry_id 5IYT _atom_sites.fract_transf_matrix[1][1] 0.017403 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004251 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019109 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016531 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NZN B 1 201 181 NZN NZN . D 3 HOH A 1 201 26 HOH HOH . D 3 HOH A 2 202 51 HOH HOH . D 3 HOH A 3 203 44 HOH HOH . D 3 HOH A 4 204 93 HOH HOH . D 3 HOH A 5 205 21 HOH HOH . D 3 HOH A 6 206 77 HOH HOH . D 3 HOH A 7 207 100 HOH HOH . D 3 HOH A 8 208 81 HOH HOH . D 3 HOH A 9 209 120 HOH HOH . D 3 HOH A 10 210 50 HOH HOH . D 3 HOH A 11 211 10 HOH HOH . D 3 HOH A 12 212 19 HOH HOH . D 3 HOH A 13 213 125 HOH HOH . D 3 HOH A 14 214 135 HOH HOH . D 3 HOH A 15 215 89 HOH HOH . D 3 HOH A 16 216 103 HOH HOH . D 3 HOH A 17 217 106 HOH HOH . D 3 HOH A 18 218 34 HOH HOH . D 3 HOH A 19 219 20 HOH HOH . D 3 HOH A 20 220 84 HOH HOH . D 3 HOH A 21 221 48 HOH HOH . D 3 HOH A 22 222 180 HOH HOH . D 3 HOH A 23 223 5 HOH HOH . D 3 HOH A 24 224 15 HOH HOH . D 3 HOH A 25 225 47 HOH HOH . D 3 HOH A 26 226 6 HOH HOH . D 3 HOH A 27 227 144 HOH HOH . D 3 HOH A 28 228 132 HOH HOH . D 3 HOH A 29 229 49 HOH HOH . D 3 HOH A 30 230 39 HOH HOH . D 3 HOH A 31 231 114 HOH HOH . D 3 HOH A 32 232 148 HOH HOH . D 3 HOH A 33 233 12 HOH HOH . D 3 HOH A 34 234 123 HOH HOH . D 3 HOH A 35 235 14 HOH HOH . D 3 HOH A 36 236 13 HOH HOH . D 3 HOH A 37 237 1 HOH HOH . D 3 HOH A 38 238 9 HOH HOH . D 3 HOH A 39 239 35 HOH HOH . D 3 HOH A 40 240 52 HOH HOH . D 3 HOH A 41 241 152 HOH HOH . D 3 HOH A 42 242 109 HOH HOH . D 3 HOH A 43 243 42 HOH HOH . D 3 HOH A 44 244 115 HOH HOH . D 3 HOH A 45 245 7 HOH HOH . D 3 HOH A 46 246 131 HOH HOH . D 3 HOH A 47 247 79 HOH HOH . D 3 HOH A 48 248 69 HOH HOH . D 3 HOH A 49 249 23 HOH HOH . D 3 HOH A 50 250 113 HOH HOH . D 3 HOH A 51 251 92 HOH HOH . D 3 HOH A 52 252 91 HOH HOH . D 3 HOH A 53 253 179 HOH HOH . D 3 HOH A 54 254 78 HOH HOH . D 3 HOH A 55 255 80 HOH HOH . D 3 HOH A 56 256 72 HOH HOH . D 3 HOH A 57 257 45 HOH HOH . D 3 HOH A 58 258 134 HOH HOH . D 3 HOH A 59 259 166 HOH HOH . D 3 HOH A 60 260 83 HOH HOH . D 3 HOH A 61 261 2 HOH HOH . D 3 HOH A 62 262 124 HOH HOH . D 3 HOH A 63 263 111 HOH HOH . D 3 HOH A 64 264 71 HOH HOH . D 3 HOH A 65 265 98 HOH HOH . D 3 HOH A 66 266 8 HOH HOH . D 3 HOH A 67 267 130 HOH HOH . D 3 HOH A 68 268 82 HOH HOH . D 3 HOH A 69 269 11 HOH HOH . D 3 HOH A 70 270 27 HOH HOH . D 3 HOH A 71 271 175 HOH HOH . D 3 HOH A 72 272 117 HOH HOH . D 3 HOH A 73 273 36 HOH HOH . D 3 HOH A 74 274 46 HOH HOH . D 3 HOH A 75 275 94 HOH HOH . D 3 HOH A 76 276 141 HOH HOH . D 3 HOH A 77 277 105 HOH HOH . D 3 HOH A 78 278 158 HOH HOH . D 3 HOH A 79 279 87 HOH HOH . D 3 HOH A 80 280 174 HOH HOH . D 3 HOH A 81 281 177 HOH HOH . D 3 HOH A 82 282 107 HOH HOH . D 3 HOH A 83 283 67 HOH HOH . D 3 HOH A 84 284 90 HOH HOH . D 3 HOH A 85 285 157 HOH HOH . D 3 HOH A 86 286 171 HOH HOH . D 3 HOH A 87 287 128 HOH HOH . D 3 HOH A 88 288 172 HOH HOH . D 3 HOH A 89 289 168 HOH HOH . D 3 HOH A 90 290 140 HOH HOH . D 3 HOH A 91 291 66 HOH HOH . D 3 HOH A 92 292 182 HOH HOH . D 3 HOH A 93 293 165 HOH HOH . D 3 HOH A 94 294 137 HOH HOH . D 3 HOH A 95 295 178 HOH HOH . D 3 HOH A 96 296 133 HOH HOH . D 3 HOH A 97 297 167 HOH HOH . D 3 HOH A 98 298 173 HOH HOH . E 3 HOH B 1 301 76 HOH HOH . E 3 HOH B 2 302 28 HOH HOH . E 3 HOH B 3 303 30 HOH HOH . E 3 HOH B 4 304 169 HOH HOH . E 3 HOH B 5 305 56 HOH HOH . E 3 HOH B 6 306 60 HOH HOH . E 3 HOH B 7 307 70 HOH HOH . E 3 HOH B 8 308 25 HOH HOH . E 3 HOH B 9 309 31 HOH HOH . E 3 HOH B 10 310 61 HOH HOH . E 3 HOH B 11 311 139 HOH HOH . E 3 HOH B 12 312 170 HOH HOH . E 3 HOH B 13 313 110 HOH HOH . E 3 HOH B 14 314 55 HOH HOH . E 3 HOH B 15 315 24 HOH HOH . E 3 HOH B 16 316 161 HOH HOH . E 3 HOH B 17 317 95 HOH HOH . E 3 HOH B 18 318 53 HOH HOH . E 3 HOH B 19 319 43 HOH HOH . E 3 HOH B 20 320 18 HOH HOH . E 3 HOH B 21 321 32 HOH HOH . E 3 HOH B 22 322 129 HOH HOH . E 3 HOH B 23 323 146 HOH HOH . E 3 HOH B 24 324 38 HOH HOH . E 3 HOH B 25 325 153 HOH HOH . E 3 HOH B 26 326 33 HOH HOH . E 3 HOH B 27 327 17 HOH HOH . E 3 HOH B 28 328 74 HOH HOH . E 3 HOH B 29 329 97 HOH HOH . E 3 HOH B 30 330 22 HOH HOH . E 3 HOH B 31 331 99 HOH HOH . E 3 HOH B 32 332 16 HOH HOH . E 3 HOH B 33 333 101 HOH HOH . E 3 HOH B 34 334 143 HOH HOH . E 3 HOH B 35 335 37 HOH HOH . E 3 HOH B 36 336 3 HOH HOH . E 3 HOH B 37 337 63 HOH HOH . E 3 HOH B 38 338 102 HOH HOH . E 3 HOH B 39 339 40 HOH HOH . E 3 HOH B 40 340 68 HOH HOH . E 3 HOH B 41 341 41 HOH HOH . E 3 HOH B 42 342 96 HOH HOH . E 3 HOH B 43 343 121 HOH HOH . E 3 HOH B 44 344 57 HOH HOH . E 3 HOH B 45 345 118 HOH HOH . E 3 HOH B 46 346 62 HOH HOH . E 3 HOH B 47 347 147 HOH HOH . E 3 HOH B 48 348 59 HOH HOH . E 3 HOH B 49 349 29 HOH HOH . E 3 HOH B 50 350 65 HOH HOH . E 3 HOH B 51 351 136 HOH HOH . E 3 HOH B 52 352 126 HOH HOH . E 3 HOH B 53 353 145 HOH HOH . E 3 HOH B 54 354 88 HOH HOH . E 3 HOH B 55 355 54 HOH HOH . E 3 HOH B 56 356 85 HOH HOH . E 3 HOH B 57 357 104 HOH HOH . E 3 HOH B 58 358 112 HOH HOH . E 3 HOH B 59 359 75 HOH HOH . E 3 HOH B 60 360 108 HOH HOH . E 3 HOH B 61 361 64 HOH HOH . E 3 HOH B 62 362 116 HOH HOH . E 3 HOH B 63 363 119 HOH HOH . E 3 HOH B 64 364 127 HOH HOH . E 3 HOH B 65 365 160 HOH HOH . E 3 HOH B 66 366 122 HOH HOH . E 3 HOH B 67 367 155 HOH HOH . E 3 HOH B 68 368 149 HOH HOH . E 3 HOH B 69 369 176 HOH HOH . E 3 HOH B 70 370 156 HOH HOH . E 3 HOH B 71 371 138 HOH HOH . E 3 HOH B 72 372 151 HOH HOH . E 3 HOH B 73 373 58 HOH HOH . E 3 HOH B 74 374 150 HOH HOH . E 3 HOH B 75 375 86 HOH HOH . E 3 HOH B 76 376 159 HOH HOH . E 3 HOH B 77 377 73 HOH HOH . E 3 HOH B 78 378 4 HOH HOH . E 3 HOH B 79 379 162 HOH HOH . E 3 HOH B 80 380 142 HOH HOH . E 3 HOH B 81 381 181 HOH HOH . E 3 HOH B 82 382 164 HOH HOH . E 3 HOH B 83 383 154 HOH HOH . E 3 HOH B 84 384 163 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O28 NZN . . . C 2 0.705 -4.458 -1.235 1 55.18 ? O28 NZN 201 B 1 HETATM 2 C C27 NZN . . . C 2 -0.352 -4.387 -1.849 1 51.68 ? C27 NZN 201 B 1 HETATM 3 N N29 NZN . . . C 2 -0.889 -3.318 -2.232 1 54.25 ? N29 NZN 201 B 1 HETATM 4 C C30 NZN . . . C 2 -0.463 -1.949 -2.035 1 54.54 ? C30 NZN 201 B 1 HETATM 5 C C31 NZN . . . C 2 -0.963 -1.544 -0.669 1 54.24 ? C31 NZN 201 B 1 HETATM 6 C C26 NZN . . . C 2 -1.124 -5.615 -2.249 1 49.65 ? C26 NZN 201 B 1 HETATM 7 C C23 NZN . . . C 2 -1.054 -6.674 -1.121 1 52.77 ? C23 NZN 201 B 1 HETATM 8 C C22 NZN . . . C 2 -1.754 -6.267 0.184 1 56.11 ? C22 NZN 201 B 1 HETATM 9 O O24 NZN . . . C 2 -2.746 -5.564 0.163 1 59.02 ? O24 NZN 201 B 1 HETATM 10 N N21 NZN . . . C 2 -1.206 -6.753 1.309 1 59.35 ? N21 NZN 201 B 1 HETATM 11 C C16 NZN . . . C 2 -1.487 -6.646 2.665 1 62.17 ? C16 NZN 201 B 1 HETATM 12 C C17 NZN . . . C 2 -0.626 -7.33 3.49 1 62.82 ? C17 NZN 201 B 1 HETATM 13 C C18 NZN . . . C 2 -1.107 -7.079 4.76 1 63.83 ? C18 NZN 201 B 1 HETATM 14 O O20 NZN . . . C 2 -0.595 -7.529 5.846 1 65.25 ? O20 NZN 201 B 1 HETATM 15 N N19 NZN . . . C 2 -2.192 -6.303 4.778 1 65.26 ? N19 NZN 201 B 1 HETATM 16 N N15 NZN . . . C 2 -2.438 -6.039 3.417 1 64.95 ? N15 NZN 201 B 1 HETATM 17 C C3 NZN . . . C 2 -3.628 -5.151 3.368 1 67.11 ? C3 NZN 201 B 1 HETATM 18 C C2 NZN . . . C 2 -4.903 -5.824 2.865 1 68.56 ? C2 NZN 201 B 1 HETATM 19 C C4 NZN . . . C 2 -3.329 -3.857 2.618 1 67.98 ? C4 NZN 201 B 1 HETATM 20 C C5 NZN . . . C 2 -3.789 -2.662 3.453 1 68.74 ? C5 NZN 201 B 1 HETATM 21 C C6 NZN . . . C 2 -5.233 -2.751 3.986 1 69.47 ? C6 NZN 201 B 1 HETATM 22 C C7 NZN . . . C 2 -6.211 -3.67 3.23 1 69.42 ? C7 NZN 201 B 1 HETATM 23 C C1 NZN . . . C 2 -6.101 -5.162 3.551 1 68.91 ? C1 NZN 201 B 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #