data_5IZF # _model_server_result.job_id Iz65A40zJL3nslBKgOX9zA _model_server_result.datetime_utc '2024-11-14 18:05:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5izf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5IZF # _exptl.entry_id 5IZF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5IZF _cell.length_a 129.15 _cell.length_b 129.15 _cell.length_c 89.86 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IZF _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D S SO4 . A SO4 402 1_555 D S SO4 . A SO4 402 9_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? covale ? covale1 A C TRP 197 A TRP 196 1_555 A N TPO 198 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C TPO 198 A TPO 197 1_555 A N LEU 199 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C VAL 338 A VAL 337 1_555 A N SEP 339 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C SEP 339 A SEP 338 1_555 A N ILE 340 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 B N1 6J9 1 E 6J9 1 1_555 B C9 AZ1 2 E AZ1 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale6 B C AZ1 2 E AZ1 2 1_555 B N DAR 3 E DAR 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale7 B C DAR 3 E DAR 3 1_555 B N ACA 4 E ACA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale8 B C ACA 4 E ACA 4 1_555 B N DAR 5 E DAR 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale9 B C DAR 5 E DAR 5 1_555 B N NH2 6 E NH2 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 415 n n S O2 SO4 doub 416 n n S O3 SO4 sing 417 n n S O4 SO4 sing 418 n n # _atom_sites.entry_id 5IZF _atom_sites.fract_transf_matrix[1][1] 0.007743 _atom_sites.fract_transf_matrix[1][2] 0.00447 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011128 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 401 401 SO4 SO4 . D 3 SO4 A 1 402 402 SO4 SO4 . E 3 SO4 A 1 403 403 SO4 SO4 . F 3 SO4 A 1 404 404 SO4 SO4 . G 4 HOH A 1 501 501 HOH HOH . G 4 HOH A 2 502 502 HOH HOH . G 4 HOH A 3 503 503 HOH HOH . G 4 HOH A 4 504 504 HOH HOH . G 4 HOH A 5 505 505 HOH HOH . G 4 HOH A 6 506 506 HOH HOH . G 4 HOH A 7 507 507 HOH HOH . G 4 HOH A 8 508 508 HOH HOH . G 4 HOH A 9 509 509 HOH HOH . G 4 HOH A 10 510 510 HOH HOH . G 4 HOH A 11 511 511 HOH HOH . G 4 HOH A 12 512 512 HOH HOH . G 4 HOH A 13 513 513 HOH HOH . G 4 HOH A 14 514 514 HOH HOH . G 4 HOH A 15 515 515 HOH HOH . G 4 HOH A 16 516 516 HOH HOH . G 4 HOH A 17 517 517 HOH HOH . G 4 HOH A 18 518 518 HOH HOH . G 4 HOH A 19 519 519 HOH HOH . G 4 HOH A 20 520 520 HOH HOH . G 4 HOH A 21 521 521 HOH HOH . G 4 HOH A 22 522 522 HOH HOH . G 4 HOH A 23 523 523 HOH HOH . G 4 HOH A 24 524 524 HOH HOH . G 4 HOH A 25 525 525 HOH HOH . G 4 HOH A 26 526 526 HOH HOH . G 4 HOH A 27 527 527 HOH HOH . G 4 HOH A 28 528 528 HOH HOH . G 4 HOH A 29 529 529 HOH HOH . G 4 HOH A 30 530 530 HOH HOH . G 4 HOH A 31 531 531 HOH HOH . G 4 HOH A 32 532 532 HOH HOH . G 4 HOH A 33 533 533 HOH HOH . G 4 HOH A 34 534 534 HOH HOH . G 4 HOH A 35 535 535 HOH HOH . G 4 HOH A 36 536 536 HOH HOH . G 4 HOH A 37 537 537 HOH HOH . G 4 HOH A 38 538 538 HOH HOH . G 4 HOH A 39 539 539 HOH HOH . G 4 HOH A 40 540 540 HOH HOH . G 4 HOH A 41 541 541 HOH HOH . G 4 HOH A 42 542 542 HOH HOH . G 4 HOH A 43 543 543 HOH HOH . G 4 HOH A 44 544 544 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 -23.885 41.681 -29.913 0.5 74.17 ? S SO4 401 A 1 HETATM 2 O O1 SO4 . . . C 3 -23.682 43.045 -30.451 0.5 74.26 ? O1 SO4 401 A 1 HETATM 3 O O2 SO4 . . . C 3 -23.257 40.678 -30.801 0.5 73.64 ? O2 SO4 401 A 1 HETATM 4 O O3 SO4 . . . C 3 -25.338 41.418 -29.816 0.5 75.22 ? O3 SO4 401 A 1 HETATM 5 O O4 SO4 . . . C 3 -23.264 41.589 -28.575 0.5 74.9 ? O4 SO4 401 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #