data_5J0A # _model_server_result.job_id U5biI4lVr4ax13Bl9XC-RQ _model_server_result.datetime_utc '2024-11-22 04:23:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j0a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":406}' # _entry.id 5J0A # _exptl.entry_id 5J0A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.158 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4'-HYDROXYCINNAMIC ACID" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5J0A _cell.length_a 75.558 _cell.length_b 97.905 _cell.length_c 162.835 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J0A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N ? 4 J N N ? 4 P N N # _chem_comp.formula 'C9 H8 O3' _chem_comp.formula_weight 164.158 _chem_comp.id HC4 _chem_comp.mon_nstd_flag . _chem_comp.name "4'-HYDROXYCINNAMIC ACID" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'PARA-COUMARIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HC4 doub 129 n n C1 O2 HC4 sing 130 n n C1 C2 HC4 sing 131 n n O2 HO2 HC4 sing 132 n n C2 C3 HC4 doub 133 e n C2 H2 HC4 sing 134 n n C3 C1' HC4 sing 135 n n C3 H3 HC4 sing 136 n n C1' C2' HC4 doub 137 n y C1' C6' HC4 sing 138 n y C2' C3' HC4 sing 139 n y C2' H2' HC4 sing 140 n n C3' C4' HC4 doub 141 n y C3' H3' HC4 sing 142 n n C4' C5' HC4 sing 143 n y C4' O4' HC4 sing 144 n n C5' C6' HC4 doub 145 n y C5' H5' HC4 sing 146 n n C6' H6' HC4 sing 147 n n O4' HO4' HC4 sing 148 n n # _atom_sites.entry_id 5J0A _atom_sites.fract_transf_matrix[1][1] 0.013235 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010214 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006141 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 401 1 SO4 SO4 . D 3 SO4 A 1 402 4 SO4 SO4 . E 3 SO4 A 1 403 5 SO4 SO4 . F 3 SO4 A 1 404 9 SO4 SO4 . G 3 SO4 A 1 405 10 SO4 SO4 . H 4 HC4 A 1 406 1 HC4 HC4 . I 4 HC4 A 1 407 2 HC4 HC4 . J 4 HC4 A 1 408 3 HC4 HC4 . K 3 SO4 B 1 401 2 SO4 SO4 . L 3 SO4 B 1 402 3 SO4 SO4 . M 3 SO4 B 1 403 6 SO4 SO4 . N 3 SO4 B 1 404 7 SO4 SO4 . O 3 SO4 B 1 405 8 SO4 SO4 . P 4 HC4 B 1 406 4 HC4 HC4 . Q 5 HOH A 1 501 138 HOH HOH . Q 5 HOH A 2 502 33 HOH HOH . Q 5 HOH A 3 503 32 HOH HOH . Q 5 HOH A 4 504 35 HOH HOH . Q 5 HOH A 5 505 111 HOH HOH . Q 5 HOH A 6 506 90 HOH HOH . Q 5 HOH A 7 507 9 HOH HOH . Q 5 HOH A 8 508 11 HOH HOH . Q 5 HOH A 9 509 113 HOH HOH . Q 5 HOH A 10 510 6 HOH HOH . Q 5 HOH A 11 511 140 HOH HOH . Q 5 HOH A 12 512 109 HOH HOH . Q 5 HOH A 13 513 39 HOH HOH . Q 5 HOH A 14 514 120 HOH HOH . Q 5 HOH A 15 515 49 HOH HOH . Q 5 HOH A 16 516 37 HOH HOH . Q 5 HOH A 17 517 18 HOH HOH . Q 5 HOH A 18 518 93 HOH HOH . Q 5 HOH A 19 519 28 HOH HOH . Q 5 HOH A 20 520 129 HOH HOH . Q 5 HOH A 21 521 77 HOH HOH . Q 5 HOH A 22 522 20 HOH HOH . Q 5 HOH A 23 523 47 HOH HOH . Q 5 HOH A 24 524 124 HOH HOH . Q 5 HOH A 25 525 3 HOH HOH . Q 5 HOH A 26 526 19 HOH HOH . Q 5 HOH A 27 527 22 HOH HOH . Q 5 HOH A 28 528 40 HOH HOH . Q 5 HOH A 29 529 123 HOH HOH . Q 5 HOH A 30 530 44 HOH HOH . Q 5 HOH A 31 531 87 HOH HOH . Q 5 HOH A 32 532 131 HOH HOH . Q 5 HOH A 33 533 34 HOH HOH . Q 5 HOH A 34 534 132 HOH HOH . Q 5 HOH A 35 535 25 HOH HOH . Q 5 HOH A 36 536 42 HOH HOH . Q 5 HOH A 37 537 68 HOH HOH . Q 5 HOH A 38 538 46 HOH HOH . Q 5 HOH A 39 539 26 HOH HOH . Q 5 HOH A 40 540 27 HOH HOH . Q 5 HOH A 41 541 23 HOH HOH . Q 5 HOH A 42 542 5 HOH HOH . Q 5 HOH A 43 543 78 HOH HOH . Q 5 HOH A 44 544 1 HOH HOH . Q 5 HOH A 45 545 130 HOH HOH . Q 5 HOH A 46 546 118 HOH HOH . Q 5 HOH A 47 547 29 HOH HOH . Q 5 HOH A 48 548 128 HOH HOH . Q 5 HOH A 49 549 10 HOH HOH . Q 5 HOH A 50 550 119 HOH HOH . Q 5 HOH A 51 551 36 HOH HOH . Q 5 HOH A 52 552 92 HOH HOH . Q 5 HOH A 53 553 114 HOH HOH . Q 5 HOH A 54 554 48 HOH HOH . Q 5 HOH A 55 555 115 HOH HOH . Q 5 HOH A 56 556 31 HOH HOH . Q 5 HOH A 57 557 134 HOH HOH . Q 5 HOH A 58 558 125 HOH HOH . Q 5 HOH A 59 559 21 HOH HOH . Q 5 HOH A 60 560 116 HOH HOH . Q 5 HOH A 61 561 139 HOH HOH . R 5 HOH B 1 501 58 HOH HOH . R 5 HOH B 2 502 142 HOH HOH . R 5 HOH B 3 503 54 HOH HOH . R 5 HOH B 4 504 83 HOH HOH . R 5 HOH B 5 505 98 HOH HOH . R 5 HOH B 6 506 150 HOH HOH . R 5 HOH B 7 507 67 HOH HOH . R 5 HOH B 8 508 76 HOH HOH . R 5 HOH B 9 509 64 HOH HOH . R 5 HOH B 10 510 82 HOH HOH . R 5 HOH B 11 511 100 HOH HOH . R 5 HOH B 12 512 103 HOH HOH . R 5 HOH B 13 513 105 HOH HOH . R 5 HOH B 14 514 94 HOH HOH . R 5 HOH B 15 515 85 HOH HOH . R 5 HOH B 16 516 57 HOH HOH . R 5 HOH B 17 517 59 HOH HOH . R 5 HOH B 18 518 72 HOH HOH . R 5 HOH B 19 519 2 HOH HOH . R 5 HOH B 20 520 106 HOH HOH . R 5 HOH B 21 521 71 HOH HOH . R 5 HOH B 22 522 145 HOH HOH . R 5 HOH B 23 523 62 HOH HOH . R 5 HOH B 24 524 108 HOH HOH . R 5 HOH B 25 525 122 HOH HOH . R 5 HOH B 26 526 97 HOH HOH . R 5 HOH B 27 527 171 HOH HOH . R 5 HOH B 28 528 66 HOH HOH . R 5 HOH B 29 529 61 HOH HOH . R 5 HOH B 30 530 89 HOH HOH . R 5 HOH B 31 531 121 HOH HOH . R 5 HOH B 32 532 144 HOH HOH . R 5 HOH B 33 533 156 HOH HOH . R 5 HOH B 34 534 65 HOH HOH . R 5 HOH B 35 535 152 HOH HOH . R 5 HOH B 36 536 141 HOH HOH . R 5 HOH B 37 537 79 HOH HOH . R 5 HOH B 38 538 75 HOH HOH . R 5 HOH B 39 539 159 HOH HOH . R 5 HOH B 40 540 60 HOH HOH . R 5 HOH B 41 541 12 HOH HOH . R 5 HOH B 42 542 170 HOH HOH . R 5 HOH B 43 543 30 HOH HOH . R 5 HOH B 44 544 166 HOH HOH . R 5 HOH B 45 545 63 HOH HOH . R 5 HOH B 46 546 69 HOH HOH . R 5 HOH B 47 547 102 HOH HOH . R 5 HOH B 48 548 160 HOH HOH . R 5 HOH B 49 549 95 HOH HOH . R 5 HOH B 50 550 24 HOH HOH . R 5 HOH B 51 551 81 HOH HOH . R 5 HOH B 52 552 15 HOH HOH . R 5 HOH B 53 553 80 HOH HOH . R 5 HOH B 54 554 17 HOH HOH . R 5 HOH B 55 555 107 HOH HOH . R 5 HOH B 56 556 86 HOH HOH . R 5 HOH B 57 557 73 HOH HOH . R 5 HOH B 58 558 161 HOH HOH . R 5 HOH B 59 559 153 HOH HOH . R 5 HOH B 60 560 133 HOH HOH . R 5 HOH B 61 561 53 HOH HOH . R 5 HOH B 62 562 168 HOH HOH . R 5 HOH B 63 563 45 HOH HOH . R 5 HOH B 64 564 149 HOH HOH . R 5 HOH B 65 565 13 HOH HOH . R 5 HOH B 66 566 169 HOH HOH . R 5 HOH B 67 567 16 HOH HOH . R 5 HOH B 68 568 104 HOH HOH . R 5 HOH B 69 569 158 HOH HOH . R 5 HOH B 70 570 101 HOH HOH . R 5 HOH B 71 571 55 HOH HOH . R 5 HOH B 72 572 70 HOH HOH . R 5 HOH B 73 573 88 HOH HOH . R 5 HOH B 74 574 146 HOH HOH . R 5 HOH B 75 575 99 HOH HOH . R 5 HOH B 76 576 117 HOH HOH . R 5 HOH B 77 577 51 HOH HOH . R 5 HOH B 78 578 162 HOH HOH . R 5 HOH B 79 579 126 HOH HOH . R 5 HOH B 80 580 154 HOH HOH . R 5 HOH B 81 581 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HC4 . . . H 4 -20.268 5.576 -2.214 1 41.9 ? C1 HC4 406 A 1 HETATM 2 O O1 HC4 . . . H 4 -19.626 6.61 -1.937 1 42.23 ? O1 HC4 406 A 1 HETATM 3 O O2 HC4 . . . H 4 -21.512 5.493 -2.153 1 40.44 ? O2 HC4 406 A 1 HETATM 4 C C2 HC4 . . . H 4 -19.562 4.45 -2.614 1 49.39 ? C2 HC4 406 A 1 HETATM 5 C C3 HC4 . . . H 4 -18.203 4.324 -2.347 1 56.28 ? C3 HC4 406 A 1 HETATM 6 C C1' HC4 . . . H 4 -17.519 3.189 -2.772 1 59.5 ? C1' HC4 406 A 1 HETATM 7 C C2' HC4 . . . H 4 -18.195 2.184 -3.457 1 62.64 ? C2' HC4 406 A 1 HETATM 8 C C3' HC4 . . . H 4 -17.497 1.125 -4.028 1 62.93 ? C3' HC4 406 A 1 HETATM 9 C C4' HC4 . . . H 4 -16.113 1.069 -3.914 1 62.99 ? C4' HC4 406 A 1 HETATM 10 C C5' HC4 . . . H 4 -15.436 2.063 -3.218 1 62.36 ? C5' HC4 406 A 1 HETATM 11 C C6' HC4 . . . H 4 -16.137 3.12 -2.645 1 60.67 ? C6' HC4 406 A 1 HETATM 12 O O4' HC4 . . . H 4 -15.426 0.064 -4.523 1 60.81 ? O4' HC4 406 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #