data_5J0Z # _model_server_result.job_id lXG9Nh7azzGZI-z8dZLFPw _model_server_result.datetime_utc '2024-11-05 06:59:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j0z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":404}' # _entry.id 5J0Z # _exptl.entry_id 5J0Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.488 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.36 _cell.angle_gamma 90 _cell.entry_id 5J0Z _cell.length_a 181.868 _cell.length_b 133.32 _cell.length_c 159.919 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J0Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 M N N ? 6 R N N ? 6 T N N ? 6 X N N ? 6 BA N N # _chem_comp.formula 'C22 H32 O2' _chem_comp.formula_weight 328.488 _chem_comp.id HXA _chem_comp.mon_nstd_flag . _chem_comp.name 'DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HXA doub 158 n n C1 O2 HXA sing 159 n n C1 C2 HXA sing 160 n n O2 HO2 HXA sing 161 n n C2 C3 HXA sing 162 n n C2 H21 HXA sing 163 n n C2 H22 HXA sing 164 n n C3 C4 HXA sing 165 n n C3 H31 HXA sing 166 n n C3 H32 HXA sing 167 n n C4 C5 HXA doub 168 z n C4 H4 HXA sing 169 n n C5 C6 HXA sing 170 n n C5 H5 HXA sing 171 n n C6 C7 HXA sing 172 n n C6 H61 HXA sing 173 n n C6 H62 HXA sing 174 n n C7 C8 HXA doub 175 z n C7 H7 HXA sing 176 n n C8 C9 HXA sing 177 n n C8 H8 HXA sing 178 n n C9 C10 HXA sing 179 n n C9 H91 HXA sing 180 n n C9 H92 HXA sing 181 n n C10 C11 HXA doub 182 z n C10 H10 HXA sing 183 n n C11 C12 HXA sing 184 n n C11 H11 HXA sing 185 n n C12 C13 HXA sing 186 n n C12 H121 HXA sing 187 n n C12 H122 HXA sing 188 n n C13 C14 HXA doub 189 z n C13 H13 HXA sing 190 n n C14 C15 HXA sing 191 n n C14 H14 HXA sing 192 n n C15 C16 HXA sing 193 n n C15 H151 HXA sing 194 n n C15 H152 HXA sing 195 n n C16 C17 HXA doub 196 z n C16 H16 HXA sing 197 n n C17 C18 HXA sing 198 n n C17 H17 HXA sing 199 n n C18 C19 HXA sing 200 n n C18 H181 HXA sing 201 n n C18 H182 HXA sing 202 n n C19 C20 HXA doub 203 z n C19 H19 HXA sing 204 n n C20 C21 HXA sing 205 n n C20 H20 HXA sing 206 n n C21 C22 HXA sing 207 n n C21 H211 HXA sing 208 n n C21 H212 HXA sing 209 n n C22 H221 HXA sing 210 n n C22 H222 HXA sing 211 n n C22 H223 HXA sing 212 n n # _atom_sites.entry_id 5J0Z _atom_sites.fract_transf_matrix[1][1] 0.005498 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001205 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006402 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 CL A 1 401 2 CL CL . G 3 LMT A 1 402 401 LMT LMT . H 3 LMT A 1 403 402 LMT LMT . I 3 LMT A 1 404 403 LMT LMT . J 4 SO4 A 1 405 2 SO4 SO4 . K 4 SO4 A 1 406 7 SO4 SO4 . L 5 ACT A 1 407 2 ACT ACT . M 6 HXA A 1 408 1 HXA HXA . N 7 PLC A 1 409 1 PLC PLC . O 3 LMT B 1 401 404 LMT LMT . P 4 SO4 B 1 402 3 SO4 SO4 . Q 4 SO4 B 1 403 4 SO4 SO4 . R 6 HXA B 1 404 5 HXA HXA . S 4 SO4 C 1 401 5 SO4 SO4 . T 6 HXA C 1 402 4 HXA HXA . U 2 CL D 1 401 3 CL CL . V 3 LMT D 1 402 405 LMT LMT . W 3 LMT D 1 403 406 LMT LMT . X 6 HXA D 1 404 6 HXA HXA . Y 2 CL E 1 401 1 CL CL . Z 4 SO4 E 1 402 6 SO4 SO4 . AA 5 ACT E 1 403 3 ACT ACT . BA 6 HXA E 1 404 7 HXA HXA . CA 8 HOH A 1 501 20 HOH HOH . CA 8 HOH A 2 502 9 HOH HOH . CA 8 HOH A 3 503 3 HOH HOH . CA 8 HOH A 4 504 22 HOH HOH . DA 8 HOH B 1 501 12 HOH HOH . DA 8 HOH B 2 502 10 HOH HOH . DA 8 HOH B 3 503 11 HOH HOH . DA 8 HOH B 4 504 4 HOH HOH . DA 8 HOH B 5 505 13 HOH HOH . DA 8 HOH B 6 506 16 HOH HOH . DA 8 HOH B 7 507 15 HOH HOH . EA 8 HOH C 1 501 25 HOH HOH . EA 8 HOH C 2 502 26 HOH HOH . EA 8 HOH C 3 503 5 HOH HOH . EA 8 HOH C 4 504 23 HOH HOH . EA 8 HOH C 5 505 17 HOH HOH . EA 8 HOH C 6 506 14 HOH HOH . EA 8 HOH C 7 507 1 HOH HOH . FA 8 HOH D 1 501 21 HOH HOH . FA 8 HOH D 2 502 24 HOH HOH . FA 8 HOH D 3 503 2 HOH HOH . GA 8 HOH E 1 501 6 HOH HOH . GA 8 HOH E 2 502 8 HOH HOH . GA 8 HOH E 3 503 7 HOH HOH . GA 8 HOH E 4 504 19 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HXA . . . BA 6 259.889 -8.191 20.629 1 124.49 ? C1 HXA 404 E 1 HETATM 2 O O1 HXA . . . BA 6 259.284 -7.673 19.669 1 125.89 ? O1 HXA 404 E 1 HETATM 3 O O2 HXA . . . BA 6 260.08 -7.577 21.698 1 118.24 ? O2 HXA 404 E 1 HETATM 4 C C2 HXA . . . BA 6 260.41 -9.6 20.482 1 122.42 ? C2 HXA 404 E 1 HETATM 5 C C3 HXA . . . BA 6 261.873 -9.629 20.895 1 121.53 ? C3 HXA 404 E 1 HETATM 6 C C4 HXA . . . BA 6 262.369 -11.013 20.61 1 127.25 ? C4 HXA 404 E 1 HETATM 7 C C5 HXA . . . BA 6 262.567 -11.884 21.59 1 127.88 ? C5 HXA 404 E 1 HETATM 8 C C6 HXA . . . BA 6 263.066 -13.254 21.207 1 127.77 ? C6 HXA 404 E 1 HETATM 9 C C7 HXA . . . BA 6 261.976 -14.006 20.469 1 124.08 ? C7 HXA 404 E 1 HETATM 10 C C8 HXA . . . BA 6 260.906 -14.554 21.065 1 125.77 ? C8 HXA 404 E 1 HETATM 11 C C9 HXA . . . BA 6 260.62 -14.494 22.561 1 131.9 ? C9 HXA 404 E 1 HETATM 12 C C10 HXA . . . BA 6 260.365 -15.877 23.158 1 126.76 ? C10 HXA 404 E 1 HETATM 13 C C11 HXA . . . BA 6 260.94 -16.24 24.316 1 116.44 ? C11 HXA 404 E 1 HETATM 14 C C12 HXA . . . BA 6 260.703 -17.602 24.942 1 108.32 ? C12 HXA 404 E 1 HETATM 15 C C13 HXA . . . BA 6 261.664 -17.82 26.105 1 99.85 ? C13 HXA 404 E 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 15 #