data_5J0Z
#
_model_server_result.job_id            cyaD0tM6LOHZxniUxSSmqg 
_model_server_result.datetime_utc      '2024-11-24 06:12:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5j0z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":404}' 
#
_entry.id    5J0Z 
#
_exptl.entry_id    5J0Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              328.488 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.36 
_cell.angle_gamma         90 
_cell.entry_id            5J0Z 
_cell.length_a            181.868 
_cell.length_b            133.32 
_cell.length_c            159.919 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5J0Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 M N N 
? 6 R N N 
? 6 T N N 
? 6 X N N 
? 6 BA N N 
#
_chem_comp.formula           'C22 H32 O2' 
_chem_comp.formula_weight    328.488 
_chem_comp.id                HXA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 HXA doub 158 n n 
C1 O2 HXA sing 159 n n 
C1 C2 HXA sing 160 n n 
O2 HO2 HXA sing 161 n n 
C2 C3 HXA sing 162 n n 
C2 H21 HXA sing 163 n n 
C2 H22 HXA sing 164 n n 
C3 C4 HXA sing 165 n n 
C3 H31 HXA sing 166 n n 
C3 H32 HXA sing 167 n n 
C4 C5 HXA doub 168 z n 
C4 H4 HXA sing 169 n n 
C5 C6 HXA sing 170 n n 
C5 H5 HXA sing 171 n n 
C6 C7 HXA sing 172 n n 
C6 H61 HXA sing 173 n n 
C6 H62 HXA sing 174 n n 
C7 C8 HXA doub 175 z n 
C7 H7 HXA sing 176 n n 
C8 C9 HXA sing 177 n n 
C8 H8 HXA sing 178 n n 
C9 C10 HXA sing 179 n n 
C9 H91 HXA sing 180 n n 
C9 H92 HXA sing 181 n n 
C10 C11 HXA doub 182 z n 
C10 H10 HXA sing 183 n n 
C11 C12 HXA sing 184 n n 
C11 H11 HXA sing 185 n n 
C12 C13 HXA sing 186 n n 
C12 H121 HXA sing 187 n n 
C12 H122 HXA sing 188 n n 
C13 C14 HXA doub 189 z n 
C13 H13 HXA sing 190 n n 
C14 C15 HXA sing 191 n n 
C14 H14 HXA sing 192 n n 
C15 C16 HXA sing 193 n n 
C15 H151 HXA sing 194 n n 
C15 H152 HXA sing 195 n n 
C16 C17 HXA doub 196 z n 
C16 H16 HXA sing 197 n n 
C17 C18 HXA sing 198 n n 
C17 H17 HXA sing 199 n n 
C18 C19 HXA sing 200 n n 
C18 H181 HXA sing 201 n n 
C18 H182 HXA sing 202 n n 
C19 C20 HXA doub 203 z n 
C19 H19 HXA sing 204 n n 
C20 C21 HXA sing 205 n n 
C20 H20 HXA sing 206 n n 
C21 C22 HXA sing 207 n n 
C21 H211 HXA sing 208 n n 
C21 H212 HXA sing 209 n n 
C22 H221 HXA sing 210 n n 
C22 H222 HXA sing 211 n n 
C22 H223 HXA sing 212 n n 
#
_atom_sites.entry_id                     5J0Z 
_atom_sites.fract_transf_matrix[1][1]    0.005498 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001205 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007501 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006402 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 CL A 1 401 2 CL CL . 
G 3 LMT A 1 402 401 LMT LMT . 
H 3 LMT A 1 403 402 LMT LMT . 
I 3 LMT A 1 404 403 LMT LMT . 
J 4 SO4 A 1 405 2 SO4 SO4 . 
K 4 SO4 A 1 406 7 SO4 SO4 . 
L 5 ACT A 1 407 2 ACT ACT . 
M 6 HXA A 1 408 1 HXA HXA . 
N 7 PLC A 1 409 1 PLC PLC . 
O 3 LMT B 1 401 404 LMT LMT . 
P 4 SO4 B 1 402 3 SO4 SO4 . 
Q 4 SO4 B 1 403 4 SO4 SO4 . 
R 6 HXA B 1 404 5 HXA HXA . 
S 4 SO4 C 1 401 5 SO4 SO4 . 
T 6 HXA C 1 402 4 HXA HXA . 
U 2 CL D 1 401 3 CL CL . 
V 3 LMT D 1 402 405 LMT LMT . 
W 3 LMT D 1 403 406 LMT LMT . 
X 6 HXA D 1 404 6 HXA HXA . 
Y 2 CL E 1 401 1 CL CL . 
Z 4 SO4 E 1 402 6 SO4 SO4 . 
AA 5 ACT E 1 403 3 ACT ACT . 
BA 6 HXA E 1 404 7 HXA HXA . 
CA 8 HOH A 1 501 20 HOH HOH . 
CA 8 HOH A 2 502 9 HOH HOH . 
CA 8 HOH A 3 503 3 HOH HOH . 
CA 8 HOH A 4 504 22 HOH HOH . 
DA 8 HOH B 1 501 12 HOH HOH . 
DA 8 HOH B 2 502 10 HOH HOH . 
DA 8 HOH B 3 503 11 HOH HOH . 
DA 8 HOH B 4 504 4 HOH HOH . 
DA 8 HOH B 5 505 13 HOH HOH . 
DA 8 HOH B 6 506 16 HOH HOH . 
DA 8 HOH B 7 507 15 HOH HOH . 
EA 8 HOH C 1 501 25 HOH HOH . 
EA 8 HOH C 2 502 26 HOH HOH . 
EA 8 HOH C 3 503 5 HOH HOH . 
EA 8 HOH C 4 504 23 HOH HOH . 
EA 8 HOH C 5 505 17 HOH HOH . 
EA 8 HOH C 6 506 14 HOH HOH . 
EA 8 HOH C 7 507 1 HOH HOH . 
FA 8 HOH D 1 501 21 HOH HOH . 
FA 8 HOH D 2 502 24 HOH HOH . 
FA 8 HOH D 3 503 2 HOH HOH . 
GA 8 HOH E 1 501 6 HOH HOH . 
GA 8 HOH E 2 502 8 HOH HOH . 
GA 8 HOH E 3 503 7 HOH HOH . 
GA 8 HOH E 4 504 19 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 HXA . . . X 6 254.659 -47.566 23.808 1 114.44 ? C1 HXA 404 D 1 
HETATM 2 O O1 HXA . . . X 6 254.621 -47.795 22.588 1 106.7 ? O1 HXA 404 D 1 
HETATM 3 O O2 HXA . . . X 6 255.442 -46.748 24.338 1 125.67 ? O2 HXA 404 D 1 
HETATM 4 C C2 HXA . . . X 6 253.731 -48.33 24.698 1 113.41 ? C2 HXA 404 D 1 
HETATM 5 C C3 HXA . . . X 6 254.633 -49.08 25.649 1 117.23 ? C3 HXA 404 D 1 
HETATM 6 C C4 HXA . . . X 6 253.74 -49.911 26.498 1 126.68 ? C4 HXA 404 D 1 
HETATM 7 C C5 HXA . . . X 6 253.319 -49.45 27.669 1 135.82 ? C5 HXA 404 D 1 
HETATM 8 C C6 HXA . . . X 6 252.419 -50.352 28.472 1 140.33 ? C6 HXA 404 D 1 
HETATM 9 C C7 HXA . . . X 6 251.187 -50.696 27.649 1 136.03 ? C7 HXA 404 D 1 
HETATM 10 C C8 HXA . . . X 6 250.03 -50.021 27.694 1 133.08 ? C8 HXA 404 D 1 
HETATM 11 C C9 HXA . . . X 6 249.761 -48.806 28.573 1 131.37 ? C9 HXA 404 D 1 
HETATM 12 C C10 HXA . . . X 6 248.896 -49.13 29.794 1 119.72 ? C10 HXA 404 D 1 
HETATM 13 C C11 HXA . . . X 6 249.421 -49.449 30.99 1 107.3 ? C11 HXA 404 D 1 
HETATM 14 C C12 HXA . . . X 6 248.531 -49.745 32.187 1 98.56 ? C12 HXA 404 D 1 
HETATM 15 C C13 HXA . . . X 6 249.342 -50.046 33.443 1 89.99 ? C13 HXA 404 D 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           350 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           15 
#