data_5J0Z # _model_server_result.job_id BZa0yOhnTczwsRhlTxBeqw _model_server_result.datetime_utc '2024-11-24 05:40:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j0z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":407}' # _entry.id 5J0Z # _exptl.entry_id 5J0Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.36 _cell.angle_gamma 90 _cell.entry_id 5J0Z _cell.length_a 181.868 _cell.length_b 133.32 _cell.length_c 159.919 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J0Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 L N N ? 5 AA N N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 5J0Z _atom_sites.fract_transf_matrix[1][1] 0.005498 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001205 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006402 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 CL A 1 401 2 CL CL . G 3 LMT A 1 402 401 LMT LMT . H 3 LMT A 1 403 402 LMT LMT . I 3 LMT A 1 404 403 LMT LMT . J 4 SO4 A 1 405 2 SO4 SO4 . K 4 SO4 A 1 406 7 SO4 SO4 . L 5 ACT A 1 407 2 ACT ACT . M 6 HXA A 1 408 1 HXA HXA . N 7 PLC A 1 409 1 PLC PLC . O 3 LMT B 1 401 404 LMT LMT . P 4 SO4 B 1 402 3 SO4 SO4 . Q 4 SO4 B 1 403 4 SO4 SO4 . R 6 HXA B 1 404 5 HXA HXA . S 4 SO4 C 1 401 5 SO4 SO4 . T 6 HXA C 1 402 4 HXA HXA . U 2 CL D 1 401 3 CL CL . V 3 LMT D 1 402 405 LMT LMT . W 3 LMT D 1 403 406 LMT LMT . X 6 HXA D 1 404 6 HXA HXA . Y 2 CL E 1 401 1 CL CL . Z 4 SO4 E 1 402 6 SO4 SO4 . AA 5 ACT E 1 403 3 ACT ACT . BA 6 HXA E 1 404 7 HXA HXA . CA 8 HOH A 1 501 20 HOH HOH . CA 8 HOH A 2 502 9 HOH HOH . CA 8 HOH A 3 503 3 HOH HOH . CA 8 HOH A 4 504 22 HOH HOH . DA 8 HOH B 1 501 12 HOH HOH . DA 8 HOH B 2 502 10 HOH HOH . DA 8 HOH B 3 503 11 HOH HOH . DA 8 HOH B 4 504 4 HOH HOH . DA 8 HOH B 5 505 13 HOH HOH . DA 8 HOH B 6 506 16 HOH HOH . DA 8 HOH B 7 507 15 HOH HOH . EA 8 HOH C 1 501 25 HOH HOH . EA 8 HOH C 2 502 26 HOH HOH . EA 8 HOH C 3 503 5 HOH HOH . EA 8 HOH C 4 504 23 HOH HOH . EA 8 HOH C 5 505 17 HOH HOH . EA 8 HOH C 6 506 14 HOH HOH . EA 8 HOH C 7 507 1 HOH HOH . FA 8 HOH D 1 501 21 HOH HOH . FA 8 HOH D 2 502 24 HOH HOH . FA 8 HOH D 3 503 2 HOH HOH . GA 8 HOH E 1 501 6 HOH HOH . GA 8 HOH E 2 502 8 HOH HOH . GA 8 HOH E 3 503 7 HOH HOH . GA 8 HOH E 4 504 19 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . L 5 222.783 -1.053 7.86 1 119.37 ? C ACT 407 A 1 HETATM 2 O O ACT . . . L 5 222.195 -1.623 6.917 1 100.02 ? O ACT 407 A 1 HETATM 3 O OXT ACT . . . L 5 223.594 -0.125 7.649 1 121.15 ? OXT ACT 407 A 1 HETATM 4 C CH3 ACT . . . L 5 222.499 -1.481 9.275 1 123.89 ? CH3 ACT 407 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #