data_5J0Z
#
_model_server_result.job_id            mUeCQrDlX0bHtZL7aJ7QUg 
_model_server_result.datetime_utc      '2024-11-24 05:33:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5j0z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":409}' 
#
_entry.id    5J0Z 
#
_exptl.entry_id    5J0Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              622.834 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIUNDECYL PHOSPHATIDYL CHOLINE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.36 
_cell.angle_gamma         90 
_cell.entry_id            5J0Z 
_cell.length_a            181.868 
_cell.length_b            133.32 
_cell.length_c            159.919 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5J0Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             N 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C32 H65 N O8 P 1' 
_chem_comp.formula_weight    622.834 
_chem_comp.id                PLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIUNDECYL PHOSPHATIDYL CHOLINE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 PLC sing 403 n n 
C1 O3P PLC sing 404 n n 
C1 H11 PLC sing 405 n n 
C1 H12 PLC sing 406 n n 
C2 C3 PLC sing 407 n n 
C2 O2 PLC sing 408 n n 
C2 H2 PLC sing 409 n n 
C3 O3 PLC sing 410 n n 
C3 H31 PLC sing 411 n n 
C3 H32 PLC sing 412 n n 
C4 C5 PLC sing 413 n n 
C4 O4P PLC sing 414 n n 
C4 H41 PLC sing 415 n n 
C4 H42 PLC sing 416 n n 
C5 N PLC sing 417 n n 
C5 H51 PLC sing 418 n n 
C5 H52 PLC sing 419 n n 
C6 N PLC sing 420 n n 
C6 H61 PLC sing 421 n n 
C6 H62 PLC sing 422 n n 
C6 H63 PLC sing 423 n n 
C7 N PLC sing 424 n n 
C7 H71 PLC sing 425 n n 
C7 H72 PLC sing 426 n n 
C7 H73 PLC sing 427 n n 
C8 N PLC sing 428 n n 
C8 H81 PLC sing 429 n n 
C8 H82 PLC sing 430 n n 
C8 H83 PLC sing 431 n n 
C' C1' PLC sing 432 n n 
C' O' PLC doub 433 n n 
C' O2 PLC sing 434 n n 
C1' C2' PLC sing 435 n n 
C1' "H1'1" PLC sing 436 n n 
C1' "H1'2" PLC sing 437 n n 
C2' C3' PLC sing 438 n n 
C2' "H2'1" PLC sing 439 n n 
C2' "H2'2" PLC sing 440 n n 
C3' C4' PLC sing 441 n n 
C3' "H3'1" PLC sing 442 n n 
C3' "H3'2" PLC sing 443 n n 
C4' C5' PLC sing 444 n n 
C4' "H4'1" PLC sing 445 n n 
C4' "H4'2" PLC sing 446 n n 
C5' C6' PLC sing 447 n n 
C5' "H5'1" PLC sing 448 n n 
C5' "H5'2" PLC sing 449 n n 
C6' C7' PLC sing 450 n n 
C6' "H6'1" PLC sing 451 n n 
C6' "H6'2" PLC sing 452 n n 
C7' C8' PLC sing 453 n n 
C7' "H7'1" PLC sing 454 n n 
C7' "H7'2" PLC sing 455 n n 
C8' C9' PLC sing 456 n n 
C8' "H8'1" PLC sing 457 n n 
C8' "H8'2" PLC sing 458 n n 
C9' CA' PLC sing 459 n n 
C9' "H9'1" PLC sing 460 n n 
C9' "H9'2" PLC sing 461 n n 
CA' CB' PLC sing 462 n n 
CA' "HT'1" PLC sing 463 n n 
CA' "HT'2" PLC sing 464 n n 
CB' "HE'1" PLC sing 465 n n 
CB' "HE'2" PLC sing 466 n n 
CB' "HE'3" PLC sing 467 n n 
CB C1B PLC sing 468 n n 
CB OB PLC doub 469 n n 
CB O3 PLC sing 470 n n 
C1B C2B PLC sing 471 n n 
C1B H1A1 PLC sing 472 n n 
C1B H1A2 PLC sing 473 n n 
C2B C3B PLC sing 474 n n 
C2B H2A1 PLC sing 475 n n 
C2B H2A2 PLC sing 476 n n 
C3B C4B PLC sing 477 n n 
C3B H3A1 PLC sing 478 n n 
C3B H3A2 PLC sing 479 n n 
C4B C5B PLC sing 480 n n 
C4B H4A1 PLC sing 481 n n 
C4B H4A2 PLC sing 482 n n 
C5B C6B PLC sing 483 n n 
C5B H5A1 PLC sing 484 n n 
C5B H5A2 PLC sing 485 n n 
C6B C7B PLC sing 486 n n 
C6B H6A1 PLC sing 487 n n 
C6B H6A2 PLC sing 488 n n 
C7B C8B PLC sing 489 n n 
C7B H7A1 PLC sing 490 n n 
C7B H7A2 PLC sing 491 n n 
C8B C9B PLC sing 492 n n 
C8B H8A1 PLC sing 493 n n 
C8B H8A2 PLC sing 494 n n 
C9B CAA PLC sing 495 n n 
C9B H9A1 PLC sing 496 n n 
C9B H9A2 PLC sing 497 n n 
CAA CBA PLC sing 498 n n 
CAA HTA1 PLC sing 499 n n 
CAA HTA2 PLC sing 500 n n 
CBA HEA1 PLC sing 501 n n 
CBA HEA2 PLC sing 502 n n 
CBA HEA3 PLC sing 503 n n 
O1P P PLC doub 504 n n 
O2P P PLC sing 505 n n 
O2P HOP2 PLC sing 506 n n 
O3P P PLC sing 507 n n 
O4P P PLC sing 508 n n 
#
_atom_sites.entry_id                     5J0Z 
_atom_sites.fract_transf_matrix[1][1]    0.005498 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001205 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007501 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006402 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 CL A 1 401 2 CL CL . 
G 3 LMT A 1 402 401 LMT LMT . 
H 3 LMT A 1 403 402 LMT LMT . 
I 3 LMT A 1 404 403 LMT LMT . 
J 4 SO4 A 1 405 2 SO4 SO4 . 
K 4 SO4 A 1 406 7 SO4 SO4 . 
L 5 ACT A 1 407 2 ACT ACT . 
M 6 HXA A 1 408 1 HXA HXA . 
N 7 PLC A 1 409 1 PLC PLC . 
O 3 LMT B 1 401 404 LMT LMT . 
P 4 SO4 B 1 402 3 SO4 SO4 . 
Q 4 SO4 B 1 403 4 SO4 SO4 . 
R 6 HXA B 1 404 5 HXA HXA . 
S 4 SO4 C 1 401 5 SO4 SO4 . 
T 6 HXA C 1 402 4 HXA HXA . 
U 2 CL D 1 401 3 CL CL . 
V 3 LMT D 1 402 405 LMT LMT . 
W 3 LMT D 1 403 406 LMT LMT . 
X 6 HXA D 1 404 6 HXA HXA . 
Y 2 CL E 1 401 1 CL CL . 
Z 4 SO4 E 1 402 6 SO4 SO4 . 
AA 5 ACT E 1 403 3 ACT ACT . 
BA 6 HXA E 1 404 7 HXA HXA . 
CA 8 HOH A 1 501 20 HOH HOH . 
CA 8 HOH A 2 502 9 HOH HOH . 
CA 8 HOH A 3 503 3 HOH HOH . 
CA 8 HOH A 4 504 22 HOH HOH . 
DA 8 HOH B 1 501 12 HOH HOH . 
DA 8 HOH B 2 502 10 HOH HOH . 
DA 8 HOH B 3 503 11 HOH HOH . 
DA 8 HOH B 4 504 4 HOH HOH . 
DA 8 HOH B 5 505 13 HOH HOH . 
DA 8 HOH B 6 506 16 HOH HOH . 
DA 8 HOH B 7 507 15 HOH HOH . 
EA 8 HOH C 1 501 25 HOH HOH . 
EA 8 HOH C 2 502 26 HOH HOH . 
EA 8 HOH C 3 503 5 HOH HOH . 
EA 8 HOH C 4 504 23 HOH HOH . 
EA 8 HOH C 5 505 17 HOH HOH . 
EA 8 HOH C 6 506 14 HOH HOH . 
EA 8 HOH C 7 507 1 HOH HOH . 
FA 8 HOH D 1 501 21 HOH HOH . 
FA 8 HOH D 2 502 24 HOH HOH . 
FA 8 HOH D 3 503 2 HOH HOH . 
GA 8 HOH E 1 501 6 HOH HOH . 
GA 8 HOH E 2 502 8 HOH HOH . 
GA 8 HOH E 3 503 7 HOH HOH . 
GA 8 HOH E 4 504 19 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLC . . . N 7 219.475 2.528 43.286 1 154.61 ? C1 PLC 409 A 1 
HETATM 2 C C2 PLC . . . N 7 219.678 2.386 44.81 1 152.29 ? C2 PLC 409 A 1 
HETATM 3 C C3 PLC . . . N 7 218.619 1.457 45.464 1 156.11 ? C3 PLC 409 A 1 
HETATM 4 C C4 PLC . . . N 7 216.143 1.688 42.376 1 163.09 ? C4 PLC 409 A 1 
HETATM 5 C C5 PLC . . . N 7 214.695 2.025 42.819 1 162.39 ? C5 PLC 409 A 1 
HETATM 6 C C6 PLC . . . N 7 214.828 0.879 45.026 1 143.42 ? C6 PLC 409 A 1 
HETATM 7 C C7 PLC . . . N 7 212.728 1.675 44.226 1 143.9 ? C7 PLC 409 A 1 
HETATM 8 C C8 PLC . . . N 7 213.747 -0.195 43.16 1 154.68 ? C8 PLC 409 A 1 
HETATM 9 C C' PLC . . . N 7 221.807 2.156 46.144 1 137.68 ? C' PLC 409 A 1 
HETATM 10 C C1' PLC . . . N 7 222.553 1.02 46.815 1 120.34 ? C1' PLC 409 A 1 
HETATM 11 C C2' PLC . . . N 7 223.004 1.264 48.253 1 105.6 ? C2' PLC 409 A 1 
HETATM 12 C C3' PLC . . . N 7 224.282 0.484 48.56 1 97.2 ? C3' PLC 409 A 1 
HETATM 13 C C4' PLC . . . N 7 224.071 -0.748 49.438 1 91.18 ? C4' PLC 409 A 1 
HETATM 14 C C5' PLC . . . N 7 225.345 -1.599 49.469 1 90.48 ? C5' PLC 409 A 1 
HETATM 15 C C6' PLC . . . N 7 225.76 -2.245 50.805 1 93.79 ? C6' PLC 409 A 1 
HETATM 16 C C7' PLC . . . N 7 227.305 -2.251 50.928 1 97.13 ? C7' PLC 409 A 1 
HETATM 17 C C8' PLC . . . N 7 227.917 -3.075 52.067 1 91.58 ? C8' PLC 409 A 1 
HETATM 18 C CB PLC . . . N 7 218.947 -0.229 47.419 1 136.03 ? CB PLC 409 A 1 
HETATM 19 C C1B PLC . . . N 7 218.835 -0.543 48.901 1 113.38 ? C1B PLC 409 A 1 
HETATM 20 C C2B PLC . . . N 7 220.196 -1.009 49.426 1 103.17 ? C2B PLC 409 A 1 
HETATM 21 C C3B PLC . . . N 7 220.154 -2.373 50.129 1 102.1 ? C3B PLC 409 A 1 
HETATM 22 C C4B PLC . . . N 7 221.55 -2.794 50.646 1 99.25 ? C4B PLC 409 A 1 
HETATM 23 C C5B PLC . . . N 7 221.592 -3.748 51.87 1 97.25 ? C5B PLC 409 A 1 
HETATM 24 C C6B PLC . . . N 7 223.032 -3.994 52.401 1 91.66 ? C6B PLC 409 A 1 
HETATM 25 C C7B PLC . . . N 7 223.133 -4.548 53.836 1 81.41 ? C7B PLC 409 A 1 
HETATM 26 O O' PLC . . . N 7 221.926 3.312 46.498 1 157.27 ? O' PLC 409 A 1 
HETATM 27 O OB PLC . . . N 7 219.143 -1.167 46.667 1 163.11 ? OB PLC 409 A 1 
HETATM 28 O O2 PLC . . . N 7 220.986 1.834 44.975 1 151.52 ? O2 PLC 409 A 1 
HETATM 29 O O3 PLC . . . N 7 218.858 1.136 46.863 1 155.39 ? O3 PLC 409 A 1 
HETATM 30 O O1P PLC . . . N 7 218.013 4.908 40.811 1 179.85 ? O1P PLC 409 A 1 
HETATM 31 O O2P PLC . . . N 7 216.666 4.793 42.958 1 211.47 ? O2P PLC 409 A 1 
HETATM 32 O O3P PLC . . . N 7 218.956 3.802 42.883 1 166.11 ? O3P PLC 409 A 1 
HETATM 33 O O4P PLC . . . N 7 216.812 2.694 41.56 1 175.62 ? O4P PLC 409 A 1 
HETATM 34 N N PLC . . . N 7 214.029 1.102 43.802 1 154.85 ? N PLC 409 A 1 
HETATM 35 P P PLC . . . N 7 217.595 4.08 42.017 1 196.13 ? P PLC 409 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           35 
#