data_5J1R # _model_server_result.job_id AHntQeFstTISVoMoQBQ9FQ _model_server_result.datetime_utc '2024-10-20 00:52:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j1r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5J1R # _exptl.entry_id 5J1R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 193.242 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(furan-3-yl)-1-(pyrrolidin-1-yl)propan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5J1R _cell.length_a 122.4 _cell.length_b 122.4 _cell.length_c 33.676 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J1R _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 33.676 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H15 N O2' _chem_comp.formula_weight 193.242 _chem_comp.id 6FG _chem_comp.mon_nstd_flag . _chem_comp.name 3-(furan-3-yl)-1-(pyrrolidin-1-yl)propan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C2 6FG sing 1 n y O C1 6FG sing 2 n y C2 C3 6FG doub 3 n y C1 C 6FG doub 4 n y C7 C8 6FG sing 5 n n C7 N 6FG sing 6 n n C3 C 6FG sing 7 n y C3 C4 6FG sing 8 n n C8 C9 6FG sing 9 n n C5 C4 6FG sing 10 n n C5 C6 6FG sing 11 n n N C6 6FG sing 12 n n N C10 6FG sing 13 n n C6 O1 6FG doub 14 n n C9 C10 6FG sing 15 n n C10 H1 6FG sing 16 n n C9 H2 6FG sing 17 n n C8 H3 6FG sing 18 n n C7 H4 6FG sing 19 n n C5 H5 6FG sing 20 n n C5 H6 6FG sing 21 n n C4 H7 6FG sing 22 n n C4 H8 6FG sing 23 n n C H9 6FG sing 24 n n C2 H10 6FG sing 25 n n C1 H11 6FG sing 26 n n C10 H12 6FG sing 27 n n C9 H13 6FG sing 28 n n C8 H14 6FG sing 29 n n C7 H15 6FG sing 30 n n # _atom_sites.entry_id 5J1R _atom_sites.fract_transf_matrix[1][1] 0.00817 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00817 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029695 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6FG A 1 301 1 6FG p88 . C 3 HOH A 1 401 9 HOH HOH . C 3 HOH A 2 402 13 HOH HOH . C 3 HOH A 3 403 12 HOH HOH . C 3 HOH A 4 404 37 HOH HOH . C 3 HOH A 5 405 36 HOH HOH . C 3 HOH A 6 406 10 HOH HOH . C 3 HOH A 7 407 20 HOH HOH . C 3 HOH A 8 408 18 HOH HOH . C 3 HOH A 9 409 31 HOH HOH . C 3 HOH A 10 410 39 HOH HOH . C 3 HOH A 11 411 17 HOH HOH . C 3 HOH A 12 412 33 HOH HOH . C 3 HOH A 13 413 7 HOH HOH . C 3 HOH A 14 414 16 HOH HOH . C 3 HOH A 15 415 30 HOH HOH . C 3 HOH A 16 416 27 HOH HOH . C 3 HOH A 17 417 11 HOH HOH . C 3 HOH A 18 418 21 HOH HOH . C 3 HOH A 19 419 3 HOH HOH . C 3 HOH A 20 420 6 HOH HOH . C 3 HOH A 21 421 28 HOH HOH . C 3 HOH A 22 422 5 HOH HOH . C 3 HOH A 23 423 15 HOH HOH . C 3 HOH A 24 424 14 HOH HOH . C 3 HOH A 25 425 38 HOH HOH . C 3 HOH A 26 426 19 HOH HOH . C 3 HOH A 27 427 25 HOH HOH . C 3 HOH A 28 428 1 HOH HOH . C 3 HOH A 29 429 8 HOH HOH . C 3 HOH A 30 430 32 HOH HOH . C 3 HOH A 31 431 2 HOH HOH . C 3 HOH A 32 432 4 HOH HOH . C 3 HOH A 33 433 35 HOH HOH . C 3 HOH A 34 434 23 HOH HOH . C 3 HOH A 35 435 22 HOH HOH . C 3 HOH A 36 436 34 HOH HOH . C 3 HOH A 37 437 40 HOH HOH . C 3 HOH A 38 438 26 HOH HOH . C 3 HOH A 39 439 29 HOH HOH . C 3 HOH A 40 440 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 6FG . . . B 2 28.465 14.275 16.529 1 27.96 ? O1 6FG 301 A 1 HETATM 2 C C6 6FG . . . B 2 29.02 14.576 15.459 1 24.07 ? C6 6FG 301 A 1 HETATM 3 N N 6FG . . . B 2 29.725 15.777 15.301 1 30.53 ? N 6FG 301 A 1 HETATM 4 C C10 6FG . . . B 2 30.198 16.63 16.404 1 25.31 ? C10 6FG 301 A 1 HETATM 5 C C9 6FG . . . B 2 31.083 17.707 15.792 1 30.99 ? C9 6FG 301 A 1 HETATM 6 C C8 6FG . . . B 2 30.941 17.43 14.326 1 31.97 ? C8 6FG 301 A 1 HETATM 7 C C7 6FG . . . B 2 30.053 16.228 14 1 27.54 ? C7 6FG 301 A 1 HETATM 8 C C5 6FG . . . B 2 28.931 13.53 14.393 1 20.06 ? C5 6FG 301 A 1 HETATM 9 C C4 6FG . . . B 2 28.261 12.347 15.06 1 24.32 ? C4 6FG 301 A 1 HETATM 10 C C3 6FG . . . B 2 28.244 11.324 14.045 1 30.92 ? C3 6FG 301 A 1 HETATM 11 C C 6FG . . . B 2 27.809 10.045 14.236 1 36.86 ? C 6FG 301 A 1 HETATM 12 C C2 6FG . . . B 2 28.683 11.564 12.747 1 30.68 ? C2 6FG 301 A 1 HETATM 13 O O 6FG . . . B 2 28.468 10.351 12.138 1 36.74 ? O 6FG 301 A 1 HETATM 14 C C1 6FG . . . B 2 27.938 9.411 13.017 1 42.79 ? C1 6FG 301 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #