data_5J1U # _model_server_result.job_id DmXrbTdUgSDXwLXWCxqwDA _model_server_result.datetime_utc '2025-01-11 00:14:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j1u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5J1U # _exptl.entry_id 5J1U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.23 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(furan-3-yl)methyl]pyrrolidine-1-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5J1U _cell.length_a 121.376 _cell.length_b 121.376 _cell.length_c 33.718 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J1U _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 33.718 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H14 N2 O2' _chem_comp.formula_weight 194.23 _chem_comp.id P93 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(furan-3-yl)methyl]pyrrolidine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C P93 doub 224 n y C1 O P93 sing 225 n y C C3 P93 sing 226 n y O C2 P93 sing 227 n y C3 C2 P93 doub 228 n y C3 C4 P93 sing 229 n n C9 C8 P93 sing 230 n n C9 N1 P93 sing 231 n n C8 C7 P93 sing 232 n n N C4 P93 sing 233 n n N C5 P93 sing 234 n n N1 C5 P93 sing 235 n n N1 C6 P93 sing 236 n n C5 O1 P93 doub 237 n n C7 C6 P93 sing 238 n n C9 H1 P93 sing 239 n n C8 H2 P93 sing 240 n n C7 H3 P93 sing 241 n n C6 H4 P93 sing 242 n n N H5 P93 sing 243 n n C4 H6 P93 sing 244 n n C4 H7 P93 sing 245 n n C H8 P93 sing 246 n n C2 H9 P93 sing 247 n n C1 H10 P93 sing 248 n n C9 H11 P93 sing 249 n n C8 H12 P93 sing 250 n n C7 H13 P93 sing 251 n n C6 H14 P93 sing 252 n n # _atom_sites.entry_id 5J1U _atom_sites.fract_transf_matrix[1][1] 0.008239 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008239 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029658 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P93 A 1 301 1 P93 p93 . C 3 HOH A 1 401 24 HOH HOH . C 3 HOH A 2 402 6 HOH HOH . C 3 HOH A 3 403 9 HOH HOH . C 3 HOH A 4 404 27 HOH HOH . C 3 HOH A 5 405 13 HOH HOH . C 3 HOH A 6 406 1 HOH HOH . C 3 HOH A 7 407 21 HOH HOH . C 3 HOH A 8 408 30 HOH HOH . C 3 HOH A 9 409 22 HOH HOH . C 3 HOH A 10 410 19 HOH HOH . C 3 HOH A 11 411 14 HOH HOH . C 3 HOH A 12 412 32 HOH HOH . C 3 HOH A 13 413 10 HOH HOH . C 3 HOH A 14 414 28 HOH HOH . C 3 HOH A 15 415 5 HOH HOH . C 3 HOH A 16 416 20 HOH HOH . C 3 HOH A 17 417 16 HOH HOH . C 3 HOH A 18 418 35 HOH HOH . C 3 HOH A 19 419 23 HOH HOH . C 3 HOH A 20 420 15 HOH HOH . C 3 HOH A 21 421 4 HOH HOH . C 3 HOH A 22 422 26 HOH HOH . C 3 HOH A 23 423 31 HOH HOH . C 3 HOH A 24 424 33 HOH HOH . C 3 HOH A 25 425 2 HOH HOH . C 3 HOH A 26 426 17 HOH HOH . C 3 HOH A 27 427 7 HOH HOH . C 3 HOH A 28 428 12 HOH HOH . C 3 HOH A 29 429 3 HOH HOH . C 3 HOH A 30 430 8 HOH HOH . C 3 HOH A 31 431 11 HOH HOH . C 3 HOH A 32 432 29 HOH HOH . C 3 HOH A 33 433 25 HOH HOH . C 3 HOH A 34 434 34 HOH HOH . C 3 HOH A 35 435 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P93 . . . B 2 27.992 13.652 16.812 1 24.37 ? O1 P93 301 A 1 HETATM 2 C C5 P93 . . . B 2 28.239 14.045 15.651 1 21.06 ? C5 P93 301 A 1 HETATM 3 N N1 P93 . . . B 2 28.936 15.169 15.377 1 24.8 ? N1 P93 301 A 1 HETATM 4 C C9 P93 . . . B 2 29.239 15.526 14.005 1 24.59 ? C9 P93 301 A 1 HETATM 5 C C8 P93 . . . B 2 30.221 16.692 14.221 1 27.64 ? C8 P93 301 A 1 HETATM 6 C C7 P93 . . . B 2 30.429 17.015 15.673 1 27.91 ? C7 P93 301 A 1 HETATM 7 C C6 P93 . . . B 2 29.487 16.075 16.409 1 22.58 ? C6 P93 301 A 1 HETATM 8 N N P93 . . . B 2 27.921 13.26 14.636 1 21.1 ? N P93 301 A 1 HETATM 9 C C4 P93 . . . B 2 27.376 11.959 14.93 1 22.23 ? C4 P93 301 A 1 HETATM 10 C C3 P93 . . . B 2 27.593 10.988 13.836 1 25.41 ? C3 P93 301 A 1 HETATM 11 C C P93 . . . B 2 28.063 11.282 12.558 1 27.85 ? C P93 301 A 1 HETATM 12 C C2 P93 . . . B 2 27.361 9.66 13.966 1 29.74 ? C2 P93 301 A 1 HETATM 13 O O P93 . . . B 2 27.674 9.139 12.71 1 36.78 ? O P93 301 A 1 HETATM 14 C C1 P93 . . . B 2 28.129 10.091 11.871 1 27.61 ? C1 P93 301 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 735 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 14 #