data_5J1W # _model_server_result.job_id jqsGZelbm8gwWK854gjNgA _model_server_result.datetime_utc '2024-11-29 21:27:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j1w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":505}' # _entry.id 5J1W # _exptl.entry_id 5J1W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 196.208 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description pyrido[3,4-g]quinazolin-2-amine _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.55 _cell.angle_gamma 90 _cell.entry_id 5J1W _cell.length_a 56.63 _cell.length_b 118.04 _cell.length_c 90.5 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J1W _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,S 1 1 B,J,K,L,T 2 1 C,M,N,O,P,Q,R,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 L N N ? 3 Q N N ? 3 R N N # _chem_comp.formula 'C11 H8 N4' _chem_comp.formula_weight 196.208 _chem_comp.id 6FB _chem_comp.mon_nstd_flag . _chem_comp.name pyrido[3,4-g]quinazolin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C 6FB doub 1 n y C1 N 6FB sing 2 n y C C10 6FB sing 3 n y N C2 6FB doub 4 n y C10 C9 6FB doub 5 n y C10 C3 6FB sing 6 n y C9 C8 6FB sing 7 n y C2 C3 6FB sing 8 n y C3 C4 6FB doub 9 n y C8 N3 6FB doub 10 n y C8 C5 6FB sing 11 n y N3 C7 6FB sing 12 n y C4 C5 6FB sing 13 n y C5 C6 6FB doub 14 n y C7 N2 6FB sing 15 n n C7 N1 6FB doub 16 n y C6 N1 6FB sing 17 n y C4 H1 6FB sing 18 n n C6 H2 6FB sing 19 n n N2 H3 6FB sing 20 n n N2 H4 6FB sing 21 n n C9 H5 6FB sing 22 n n C H6 6FB sing 23 n n C2 H7 6FB sing 24 n n C1 H8 6FB sing 25 n n # _atom_sites.entry_id 5J1W _atom_sites.fract_transf_matrix[1][1] 0.017658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002971 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008472 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011205 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GOL A 1 501 1 GOL GOL . E 2 GOL A 1 502 2 GOL GOL . F 2 GOL A 1 503 3 GOL GOL . G 2 GOL A 1 504 4 GOL GOL . H 2 GOL A 1 505 5 GOL GOL . I 3 6FB A 1 506 1 6FB XXX . J 2 GOL B 1 501 8 GOL GOL . K 4 PO4 B 1 502 2 PO4 PO4 . L 3 6FB B 1 503 2 6FB XXX . M 2 GOL C 1 501 6 GOL GOL . N 2 GOL C 1 502 7 GOL GOL . O 2 GOL C 1 503 9 GOL GOL . P 4 PO4 C 1 504 1 PO4 PO4 . Q 3 6FB C 1 505 3 6FB XXX . R 3 6FB C 1 506 4 6FB XXX . S 5 HOH A 1 601 92 HOH HOH . S 5 HOH A 2 602 10 HOH HOH . S 5 HOH A 3 603 67 HOH HOH . S 5 HOH A 4 604 34 HOH HOH . S 5 HOH A 5 605 86 HOH HOH . S 5 HOH A 6 606 89 HOH HOH . S 5 HOH A 7 607 82 HOH HOH . S 5 HOH A 8 608 87 HOH HOH . S 5 HOH A 9 609 93 HOH HOH . S 5 HOH A 10 610 81 HOH HOH . S 5 HOH A 11 611 70 HOH HOH . S 5 HOH A 12 612 20 HOH HOH . S 5 HOH A 13 613 31 HOH HOH . S 5 HOH A 14 614 26 HOH HOH . S 5 HOH A 15 615 28 HOH HOH . S 5 HOH A 16 616 78 HOH HOH . S 5 HOH A 17 617 36 HOH HOH . S 5 HOH A 18 618 23 HOH HOH . S 5 HOH A 19 619 9 HOH HOH . S 5 HOH A 20 620 44 HOH HOH . S 5 HOH A 21 621 21 HOH HOH . S 5 HOH A 22 622 27 HOH HOH . S 5 HOH A 23 623 76 HOH HOH . S 5 HOH A 24 624 73 HOH HOH . S 5 HOH A 25 625 22 HOH HOH . S 5 HOH A 26 626 64 HOH HOH . S 5 HOH A 27 627 6 HOH HOH . S 5 HOH A 28 628 69 HOH HOH . S 5 HOH A 29 629 32 HOH HOH . S 5 HOH A 30 630 15 HOH HOH . S 5 HOH A 31 631 66 HOH HOH . S 5 HOH A 32 632 45 HOH HOH . S 5 HOH A 33 633 83 HOH HOH . S 5 HOH A 34 634 94 HOH HOH . S 5 HOH A 35 635 90 HOH HOH . S 5 HOH A 36 636 65 HOH HOH . S 5 HOH A 37 637 136 HOH HOH . S 5 HOH A 38 638 11 HOH HOH . S 5 HOH A 39 639 91 HOH HOH . S 5 HOH A 40 640 79 HOH HOH . S 5 HOH A 41 641 72 HOH HOH . S 5 HOH A 42 642 88 HOH HOH . S 5 HOH A 43 643 68 HOH HOH . S 5 HOH A 44 644 80 HOH HOH . S 5 HOH A 45 645 137 HOH HOH . S 5 HOH A 46 646 71 HOH HOH . T 5 HOH B 1 601 19 HOH HOH . T 5 HOH B 2 602 107 HOH HOH . T 5 HOH B 3 603 3 HOH HOH . T 5 HOH B 4 604 42 HOH HOH . T 5 HOH B 5 605 104 HOH HOH . T 5 HOH B 6 606 7 HOH HOH . T 5 HOH B 7 607 96 HOH HOH . T 5 HOH B 8 608 55 HOH HOH . T 5 HOH B 9 609 47 HOH HOH . T 5 HOH B 10 610 18 HOH HOH . T 5 HOH B 11 611 12 HOH HOH . T 5 HOH B 12 612 38 HOH HOH . T 5 HOH B 13 613 51 HOH HOH . T 5 HOH B 14 614 101 HOH HOH . T 5 HOH B 15 615 102 HOH HOH . T 5 HOH B 16 616 106 HOH HOH . T 5 HOH B 17 617 98 HOH HOH . T 5 HOH B 18 618 138 HOH HOH . T 5 HOH B 19 619 52 HOH HOH . T 5 HOH B 20 620 95 HOH HOH . T 5 HOH B 21 621 2 HOH HOH . T 5 HOH B 22 622 5 HOH HOH . T 5 HOH B 23 623 109 HOH HOH . T 5 HOH B 24 624 1 HOH HOH . T 5 HOH B 25 625 40 HOH HOH . T 5 HOH B 26 626 35 HOH HOH . T 5 HOH B 27 627 111 HOH HOH . T 5 HOH B 28 628 105 HOH HOH . T 5 HOH B 29 629 110 HOH HOH . T 5 HOH B 30 630 53 HOH HOH . T 5 HOH B 31 631 54 HOH HOH . T 5 HOH B 32 632 141 HOH HOH . U 5 HOH C 1 601 139 HOH HOH . U 5 HOH C 2 602 133 HOH HOH . U 5 HOH C 3 603 122 HOH HOH . U 5 HOH C 4 604 134 HOH HOH . U 5 HOH C 5 605 130 HOH HOH . U 5 HOH C 6 606 128 HOH HOH . U 5 HOH C 7 607 8 HOH HOH . U 5 HOH C 8 608 132 HOH HOH . U 5 HOH C 9 609 124 HOH HOH . U 5 HOH C 10 610 25 HOH HOH . U 5 HOH C 11 611 24 HOH HOH . U 5 HOH C 12 612 129 HOH HOH . U 5 HOH C 13 613 4 HOH HOH . U 5 HOH C 14 614 113 HOH HOH . U 5 HOH C 15 615 37 HOH HOH . U 5 HOH C 16 616 13 HOH HOH . U 5 HOH C 17 617 30 HOH HOH . U 5 HOH C 18 618 127 HOH HOH . U 5 HOH C 19 619 114 HOH HOH . U 5 HOH C 20 620 33 HOH HOH . U 5 HOH C 21 621 131 HOH HOH . U 5 HOH C 22 622 118 HOH HOH . U 5 HOH C 23 623 112 HOH HOH . U 5 HOH C 24 624 140 HOH HOH . U 5 HOH C 25 625 125 HOH HOH . U 5 HOH C 26 626 126 HOH HOH . U 5 HOH C 27 627 116 HOH HOH . U 5 HOH C 28 628 117 HOH HOH . U 5 HOH C 29 629 121 HOH HOH . U 5 HOH C 30 630 48 HOH HOH . U 5 HOH C 31 631 119 HOH HOH . U 5 HOH C 32 632 58 HOH HOH . U 5 HOH C 33 633 120 HOH HOH . U 5 HOH C 34 634 63 HOH HOH . U 5 HOH C 35 635 115 HOH HOH . U 5 HOH C 36 636 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 6FB . . . Q 3 1.829 -2.991 -54.677 1 27.5 ? C4 6FB 505 C 1 HETATM 2 C C5 6FB . . . Q 3 1.865 -3.021 -56.062 1 25.55 ? C5 6FB 505 C 1 HETATM 3 C C6 6FB . . . Q 3 1.777 -4.158 -56.898 1 28.72 ? C6 6FB 505 C 1 HETATM 4 N N1 6FB . . . Q 3 1.784 -4.135 -58.212 1 27.62 ? N1 6FB 505 C 1 HETATM 5 C C7 6FB . . . Q 3 1.908 -2.923 -58.777 1 30.01 ? C7 6FB 505 C 1 HETATM 6 C C8 6FB . . . Q 3 2.002 -1.804 -56.757 1 29.18 ? C8 6FB 505 C 1 HETATM 7 N N2 6FB . . . Q 3 1.857 -2.864 -60.114 1 35.23 ? N2 6FB 505 C 1 HETATM 8 C C9 6FB . . . Q 3 2.074 -0.611 -56.039 1 30.49 ? C9 6FB 505 C 1 HETATM 9 C C10 6FB . . . Q 3 2.037 -0.595 -54.644 1 30.66 ? C10 6FB 505 C 1 HETATM 10 N N3 6FB . . . Q 3 2.029 -1.761 -58.125 1 31.4 ? N3 6FB 505 C 1 HETATM 11 C C 6FB . . . Q 3 2.044 0.609 -53.894 1 32.51 ? C 6FB 505 C 1 HETATM 12 C C3 6FB . . . Q 3 1.953 -1.808 -53.953 1 28.31 ? C3 6FB 505 C 1 HETATM 13 C C2 6FB . . . Q 3 1.982 -1.738 -52.534 1 31.45 ? C2 6FB 505 C 1 HETATM 14 N N 6FB . . . Q 3 2.034 -0.598 -51.838 1 32.75 ? N 6FB 505 C 1 HETATM 15 C C1 6FB . . . Q 3 2.027 0.547 -52.535 1 32.51 ? C1 6FB 505 C 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #