data_5J2T # _model_server_result.job_id '_LE96yFXmIculTuDsWfjhA' _model_server_result.datetime_utc '2024-11-23 21:21:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j2t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":501}' # _entry.id 5J2T # _exptl.entry_id 5J2T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5J2T _cell.length_a 105.25 _cell.length_b 157.74 _cell.length_c 182.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J2T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 M N N ? 9 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.988 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? metalc ? metalc8 A OD2 ASP 69 A ASP 69 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc9 A OE1 GLU 71 A GLU 71 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc10 H MG MG . A MG 502 1_555 Q O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? metalc ? metalc11 H MG MG . A MG 502 1_555 Q O HOH . A HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.854 ? metalc ? metalc12 H MG MG . A MG 502 1_555 Q O HOH . A HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? metalc ? metalc13 J O1G GTP . C GTP 501 1_555 K MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc14 J O1B GTP . C GTP 501 1_555 K MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc15 K MG MG . C MG 502 1_555 R O HOH . C HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc16 K MG MG . C MG 502 1_555 R O HOH . C HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc17 K MG MG . C MG 502 1_555 R O HOH . C HOH 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc18 R O HOH . C HOH 714 1_555 O MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc19 F OE1 GLN 11 B GLN 11 1_555 O MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc20 N O1A GDP . B GDP 501 1_555 O MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc21 O MG MG . B MG 502 1_555 V O HOH . B HOH 664 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.924 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 5J2T _atom_sites.fract_transf_matrix[1][1] 0.009501 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00548 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 1 CA CA . J 5 GTP C 1 501 501 GTP GTP . K 6 MG C 1 502 502 MG MG . L 8 VLB C 1 503 1 VLB VLB . M 9 GDP D 1 501 501 GDP GDP . N 9 GDP B 1 501 501 GDP GDP . O 6 MG B 1 502 502 MG MG . P 10 MES B 1 503 503 MES MES . Q 11 HOH A 1 601 16 HOH HOH . Q 11 HOH A 2 602 300 HOH HOH . Q 11 HOH A 3 603 152 HOH HOH . Q 11 HOH A 4 604 335 HOH HOH . Q 11 HOH A 5 605 72 HOH HOH . Q 11 HOH A 6 606 98 HOH HOH . Q 11 HOH A 7 607 221 HOH HOH . Q 11 HOH A 8 608 290 HOH HOH . Q 11 HOH A 9 609 109 HOH HOH . Q 11 HOH A 10 610 237 HOH HOH . Q 11 HOH A 11 611 141 HOH HOH . Q 11 HOH A 12 612 133 HOH HOH . Q 11 HOH A 13 613 2 HOH HOH . Q 11 HOH A 14 614 78 HOH HOH . Q 11 HOH A 15 615 137 HOH HOH . Q 11 HOH A 16 616 73 HOH HOH . Q 11 HOH A 17 617 70 HOH HOH . Q 11 HOH A 18 618 203 HOH HOH . Q 11 HOH A 19 619 224 HOH HOH . Q 11 HOH A 20 620 64 HOH HOH . Q 11 HOH A 21 621 315 HOH HOH . Q 11 HOH A 22 622 139 HOH HOH . Q 11 HOH A 23 623 292 HOH HOH . Q 11 HOH A 24 624 334 HOH HOH . Q 11 HOH A 25 625 52 HOH HOH . Q 11 HOH A 26 626 170 HOH HOH . Q 11 HOH A 27 627 66 HOH HOH . Q 11 HOH A 28 628 93 HOH HOH . Q 11 HOH A 29 629 130 HOH HOH . Q 11 HOH A 30 630 101 HOH HOH . Q 11 HOH A 31 631 206 HOH HOH . Q 11 HOH A 32 632 88 HOH HOH . Q 11 HOH A 33 633 299 HOH HOH . Q 11 HOH A 34 634 275 HOH HOH . Q 11 HOH A 35 635 49 HOH HOH . Q 11 HOH A 36 636 8 HOH HOH . Q 11 HOH A 37 637 325 HOH HOH . Q 11 HOH A 38 638 321 HOH HOH . Q 11 HOH A 39 639 118 HOH HOH . Q 11 HOH A 40 640 164 HOH HOH . Q 11 HOH A 41 641 176 HOH HOH . Q 11 HOH A 42 642 110 HOH HOH . Q 11 HOH A 43 643 121 HOH HOH . Q 11 HOH A 44 644 87 HOH HOH . Q 11 HOH A 45 645 225 HOH HOH . Q 11 HOH A 46 646 35 HOH HOH . Q 11 HOH A 47 647 10 HOH HOH . Q 11 HOH A 48 648 311 HOH HOH . Q 11 HOH A 49 649 125 HOH HOH . Q 11 HOH A 50 650 173 HOH HOH . Q 11 HOH A 51 651 43 HOH HOH . Q 11 HOH A 52 652 21 HOH HOH . Q 11 HOH A 53 653 40 HOH HOH . Q 11 HOH A 54 654 165 HOH HOH . Q 11 HOH A 55 655 245 HOH HOH . Q 11 HOH A 56 656 197 HOH HOH . Q 11 HOH A 57 657 144 HOH HOH . Q 11 HOH A 58 658 239 HOH HOH . Q 11 HOH A 59 659 199 HOH HOH . R 11 HOH C 1 601 296 HOH HOH . R 11 HOH C 2 602 218 HOH HOH . R 11 HOH C 3 603 104 HOH HOH . R 11 HOH C 4 604 142 HOH HOH . R 11 HOH C 5 605 297 HOH HOH . R 11 HOH C 6 606 129 HOH HOH . R 11 HOH C 7 607 279 HOH HOH . R 11 HOH C 8 608 287 HOH HOH . R 11 HOH C 9 609 113 HOH HOH . R 11 HOH C 10 610 140 HOH HOH . R 11 HOH C 11 611 149 HOH HOH . R 11 HOH C 12 612 58 HOH HOH . R 11 HOH C 13 613 69 HOH HOH . R 11 HOH C 14 614 89 HOH HOH . R 11 HOH C 15 615 68 HOH HOH . R 11 HOH C 16 616 82 HOH HOH . R 11 HOH C 17 617 179 HOH HOH . R 11 HOH C 18 618 57 HOH HOH . R 11 HOH C 19 619 63 HOH HOH . R 11 HOH C 20 620 231 HOH HOH . R 11 HOH C 21 621 320 HOH HOH . R 11 HOH C 22 622 50 HOH HOH . R 11 HOH C 23 623 162 HOH HOH . R 11 HOH C 24 624 7 HOH HOH . R 11 HOH C 25 625 308 HOH HOH . R 11 HOH C 26 626 303 HOH HOH . R 11 HOH C 27 627 4 HOH HOH . R 11 HOH C 28 628 293 HOH HOH . R 11 HOH C 29 629 219 HOH HOH . R 11 HOH C 30 630 372 HOH HOH . R 11 HOH C 31 631 271 HOH HOH . R 11 HOH C 32 632 157 HOH HOH . R 11 HOH C 33 633 346 HOH HOH . R 11 HOH C 34 634 65 HOH HOH . R 11 HOH C 35 635 91 HOH HOH . R 11 HOH C 36 636 19 HOH HOH . R 11 HOH C 37 637 123 HOH HOH . R 11 HOH C 38 638 132 HOH HOH . R 11 HOH C 39 639 53 HOH HOH . R 11 HOH C 40 640 81 HOH HOH . R 11 HOH C 41 641 148 HOH HOH . R 11 HOH C 42 642 1 HOH HOH . R 11 HOH C 43 643 138 HOH HOH . R 11 HOH C 44 644 46 HOH HOH . R 11 HOH C 45 645 235 HOH HOH . R 11 HOH C 46 646 115 HOH HOH . R 11 HOH C 47 647 310 HOH HOH . R 11 HOH C 48 648 31 HOH HOH . R 11 HOH C 49 649 145 HOH HOH . R 11 HOH C 50 650 108 HOH HOH . R 11 HOH C 51 651 215 HOH HOH . R 11 HOH C 52 652 323 HOH HOH . R 11 HOH C 53 653 192 HOH HOH . R 11 HOH C 54 654 67 HOH HOH . R 11 HOH C 55 655 216 HOH HOH . R 11 HOH C 56 656 136 HOH HOH . R 11 HOH C 57 657 337 HOH HOH . R 11 HOH C 58 658 111 HOH HOH . R 11 HOH C 59 659 60 HOH HOH . R 11 HOH C 60 660 92 HOH HOH . R 11 HOH C 61 661 360 HOH HOH . R 11 HOH C 62 662 74 HOH HOH . R 11 HOH C 63 663 339 HOH HOH . R 11 HOH C 64 664 204 HOH HOH . R 11 HOH C 65 665 161 HOH HOH . R 11 HOH C 66 666 280 HOH HOH . R 11 HOH C 67 667 90 HOH HOH . R 11 HOH C 68 668 128 HOH HOH . R 11 HOH C 69 669 18 HOH HOH . R 11 HOH C 70 670 95 HOH HOH . R 11 HOH C 71 671 278 HOH HOH . R 11 HOH C 72 672 365 HOH HOH . R 11 HOH C 73 673 318 HOH HOH . R 11 HOH C 74 674 211 HOH HOH . R 11 HOH C 75 675 24 HOH HOH . R 11 HOH C 76 676 80 HOH HOH . R 11 HOH C 77 677 367 HOH HOH . R 11 HOH C 78 678 107 HOH HOH . R 11 HOH C 79 679 85 HOH HOH . R 11 HOH C 80 680 226 HOH HOH . R 11 HOH C 81 681 373 HOH HOH . R 11 HOH C 82 682 220 HOH HOH . R 11 HOH C 83 683 246 HOH HOH . R 11 HOH C 84 684 327 HOH HOH . R 11 HOH C 85 685 228 HOH HOH . R 11 HOH C 86 686 182 HOH HOH . R 11 HOH C 87 687 272 HOH HOH . R 11 HOH C 88 688 41 HOH HOH . R 11 HOH C 89 689 177 HOH HOH . R 11 HOH C 90 690 13 HOH HOH . R 11 HOH C 91 691 269 HOH HOH . R 11 HOH C 92 692 126 HOH HOH . R 11 HOH C 93 693 286 HOH HOH . R 11 HOH C 94 694 119 HOH HOH . R 11 HOH C 95 695 84 HOH HOH . R 11 HOH C 96 696 371 HOH HOH . R 11 HOH C 97 697 241 HOH HOH . R 11 HOH C 98 698 183 HOH HOH . R 11 HOH C 99 699 163 HOH HOH . R 11 HOH C 100 700 32 HOH HOH . R 11 HOH C 101 701 151 HOH HOH . R 11 HOH C 102 702 344 HOH HOH . R 11 HOH C 103 703 369 HOH HOH . R 11 HOH C 104 704 361 HOH HOH . R 11 HOH C 105 705 214 HOH HOH . R 11 HOH C 106 706 42 HOH HOH . R 11 HOH C 107 707 223 HOH HOH . R 11 HOH C 108 708 188 HOH HOH . R 11 HOH C 109 709 326 HOH HOH . R 11 HOH C 110 710 153 HOH HOH . R 11 HOH C 111 711 233 HOH HOH . R 11 HOH C 112 712 209 HOH HOH . R 11 HOH C 113 713 232 HOH HOH . R 11 HOH C 114 714 357 HOH HOH . R 11 HOH C 115 715 155 HOH HOH . R 11 HOH C 116 716 194 HOH HOH . R 11 HOH C 117 717 294 HOH HOH . R 11 HOH C 118 718 213 HOH HOH . R 11 HOH C 119 719 243 HOH HOH . R 11 HOH C 120 720 364 HOH HOH . R 11 HOH C 121 721 150 HOH HOH . R 11 HOH C 122 722 307 HOH HOH . R 11 HOH C 123 723 345 HOH HOH . R 11 HOH C 124 724 167 HOH HOH . S 11 HOH D 1 601 350 HOH HOH . S 11 HOH D 2 602 205 HOH HOH . S 11 HOH D 3 603 306 HOH HOH . S 11 HOH D 4 604 281 HOH HOH . S 11 HOH D 5 605 175 HOH HOH . S 11 HOH D 6 606 94 HOH HOH . S 11 HOH D 7 607 295 HOH HOH . S 11 HOH D 8 608 102 HOH HOH . S 11 HOH D 9 609 61 HOH HOH . S 11 HOH D 10 610 120 HOH HOH . S 11 HOH D 11 611 342 HOH HOH . S 11 HOH D 12 612 212 HOH HOH . S 11 HOH D 13 613 114 HOH HOH . S 11 HOH D 14 614 227 HOH HOH . S 11 HOH D 15 615 171 HOH HOH . S 11 HOH D 16 616 340 HOH HOH . S 11 HOH D 17 617 147 HOH HOH . S 11 HOH D 18 618 168 HOH HOH . S 11 HOH D 19 619 166 HOH HOH . S 11 HOH D 20 620 238 HOH HOH . S 11 HOH D 21 621 222 HOH HOH . S 11 HOH D 22 622 30 HOH HOH . S 11 HOH D 23 623 187 HOH HOH . S 11 HOH D 24 624 289 HOH HOH . S 11 HOH D 25 625 312 HOH HOH . S 11 HOH D 26 626 37 HOH HOH . T 11 HOH E 1 201 160 HOH HOH . T 11 HOH E 2 202 343 HOH HOH . T 11 HOH E 3 203 329 HOH HOH . T 11 HOH E 4 204 17 HOH HOH . T 11 HOH E 5 205 186 HOH HOH . T 11 HOH E 6 206 184 HOH HOH . T 11 HOH E 7 207 189 HOH HOH . T 11 HOH E 8 208 285 HOH HOH . T 11 HOH E 9 209 336 HOH HOH . T 11 HOH E 10 210 36 HOH HOH . U 11 HOH F 1 401 330 HOH HOH . U 11 HOH F 2 402 190 HOH HOH . U 11 HOH F 3 403 122 HOH HOH . U 11 HOH F 4 404 207 HOH HOH . U 11 HOH F 5 405 230 HOH HOH . U 11 HOH F 6 406 117 HOH HOH . U 11 HOH F 7 407 146 HOH HOH . U 11 HOH F 8 408 99 HOH HOH . U 11 HOH F 9 409 34 HOH HOH . U 11 HOH F 10 410 103 HOH HOH . U 11 HOH F 11 411 158 HOH HOH . U 11 HOH F 12 412 210 HOH HOH . U 11 HOH F 13 413 28 HOH HOH . U 11 HOH F 14 414 23 HOH HOH . U 11 HOH F 15 415 172 HOH HOH . U 11 HOH F 16 416 316 HOH HOH . U 11 HOH F 17 417 217 HOH HOH . U 11 HOH F 18 418 298 HOH HOH . U 11 HOH F 19 419 195 HOH HOH . U 11 HOH F 20 420 338 HOH HOH . U 11 HOH F 21 421 39 HOH HOH . U 11 HOH F 22 422 3 HOH HOH . U 11 HOH F 23 423 244 HOH HOH . U 11 HOH F 24 424 282 HOH HOH . U 11 HOH F 25 425 304 HOH HOH . U 11 HOH F 26 426 45 HOH HOH . U 11 HOH F 27 427 193 HOH HOH . U 11 HOH F 28 428 100 HOH HOH . U 11 HOH F 29 429 181 HOH HOH . U 11 HOH F 30 430 242 HOH HOH . U 11 HOH F 31 431 348 HOH HOH . V 11 HOH B 1 601 347 HOH HOH . V 11 HOH B 2 602 355 HOH HOH . V 11 HOH B 3 603 71 HOH HOH . V 11 HOH B 4 604 366 HOH HOH . V 11 HOH B 5 605 27 HOH HOH . V 11 HOH B 6 606 191 HOH HOH . V 11 HOH B 7 607 154 HOH HOH . V 11 HOH B 8 608 44 HOH HOH . V 11 HOH B 9 609 124 HOH HOH . V 11 HOH B 10 610 79 HOH HOH . V 11 HOH B 11 611 127 HOH HOH . V 11 HOH B 12 612 131 HOH HOH . V 11 HOH B 13 613 301 HOH HOH . V 11 HOH B 14 614 156 HOH HOH . V 11 HOH B 15 615 274 HOH HOH . V 11 HOH B 16 616 180 HOH HOH . V 11 HOH B 17 617 29 HOH HOH . V 11 HOH B 18 618 38 HOH HOH . V 11 HOH B 19 619 75 HOH HOH . V 11 HOH B 20 620 208 HOH HOH . V 11 HOH B 21 621 11 HOH HOH . V 11 HOH B 22 622 77 HOH HOH . V 11 HOH B 23 623 56 HOH HOH . V 11 HOH B 24 624 185 HOH HOH . V 11 HOH B 25 625 314 HOH HOH . V 11 HOH B 26 626 20 HOH HOH . V 11 HOH B 27 627 14 HOH HOH . V 11 HOH B 28 628 362 HOH HOH . V 11 HOH B 29 629 12 HOH HOH . V 11 HOH B 30 630 266 HOH HOH . V 11 HOH B 31 631 33 HOH HOH . V 11 HOH B 32 632 352 HOH HOH . V 11 HOH B 33 633 116 HOH HOH . V 11 HOH B 34 634 9 HOH HOH . V 11 HOH B 35 635 106 HOH HOH . V 11 HOH B 36 636 313 HOH HOH . V 11 HOH B 37 637 62 HOH HOH . V 11 HOH B 38 638 273 HOH HOH . V 11 HOH B 39 639 59 HOH HOH . V 11 HOH B 40 640 105 HOH HOH . V 11 HOH B 41 641 351 HOH HOH . V 11 HOH B 42 642 76 HOH HOH . V 11 HOH B 43 643 143 HOH HOH . V 11 HOH B 44 644 15 HOH HOH . V 11 HOH B 45 645 112 HOH HOH . V 11 HOH B 46 646 370 HOH HOH . V 11 HOH B 47 647 25 HOH HOH . V 11 HOH B 48 648 26 HOH HOH . V 11 HOH B 49 649 324 HOH HOH . V 11 HOH B 50 650 5 HOH HOH . V 11 HOH B 51 651 6 HOH HOH . V 11 HOH B 52 652 305 HOH HOH . V 11 HOH B 53 653 54 HOH HOH . V 11 HOH B 54 654 354 HOH HOH . V 11 HOH B 55 655 236 HOH HOH . V 11 HOH B 56 656 333 HOH HOH . V 11 HOH B 57 657 328 HOH HOH . V 11 HOH B 58 658 240 HOH HOH . V 11 HOH B 59 659 332 HOH HOH . V 11 HOH B 60 660 196 HOH HOH . V 11 HOH B 61 661 291 HOH HOH . V 11 HOH B 62 662 178 HOH HOH . V 11 HOH B 63 663 359 HOH HOH . V 11 HOH B 64 664 86 HOH HOH . V 11 HOH B 65 665 368 HOH HOH . V 11 HOH B 66 666 135 HOH HOH . V 11 HOH B 67 667 319 HOH HOH . V 11 HOH B 68 668 353 HOH HOH . V 11 HOH B 69 669 134 HOH HOH . V 11 HOH B 70 670 169 HOH HOH . V 11 HOH B 71 671 341 HOH HOH . V 11 HOH B 72 672 358 HOH HOH . V 11 HOH B 73 673 356 HOH HOH . V 11 HOH B 74 674 234 HOH HOH . V 11 HOH B 75 675 159 HOH HOH . V 11 HOH B 76 676 229 HOH HOH . V 11 HOH B 77 677 198 HOH HOH . V 11 HOH B 78 678 322 HOH HOH . V 11 HOH B 79 679 363 HOH HOH . V 11 HOH B 80 680 22 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . M 9 24.831 -10.403 -42.935 1 80.02 ? PB GDP 501 D 1 HETATM 2 O O1B GDP . . . M 9 24.379 -9.553 -44.096 1 54.81 ? O1B GDP 501 D 1 HETATM 3 O O2B GDP . . . M 9 24.836 -9.573 -41.669 1 97.59 ? O2B GDP 501 D 1 HETATM 4 O O3B GDP . . . M 9 26.229 -10.933 -43.158 1 65.01 ? O3B GDP 501 D 1 HETATM 5 O O3A GDP . . . M 9 23.789 -11.621 -42.747 1 78.44 ? O3A GDP 501 D 1 HETATM 6 P PA GDP . . . M 9 22.198 -11.389 -42.554 1 71.59 ? PA GDP 501 D 1 HETATM 7 O O1A GDP . . . M 9 21.402 -12.093 -43.624 1 90.56 ? O1A GDP 501 D 1 HETATM 8 O O2A GDP . . . M 9 21.804 -9.93 -42.601 1 61.89 ? O2A GDP 501 D 1 HETATM 9 O O5' GDP . . . M 9 21.969 -12.074 -41.108 1 74.65 ? O5' GDP 501 D 1 HETATM 10 C C5' GDP . . . M 9 21.265 -13.304 -40.938 1 75.11 ? C5' GDP 501 D 1 HETATM 11 C C4' GDP . . . M 9 20.125 -13.111 -39.952 1 69.6 ? C4' GDP 501 D 1 HETATM 12 O O4' GDP . . . M 9 19.406 -11.944 -40.349 1 62.19 ? O4' GDP 501 D 1 HETATM 13 C C3' GDP . . . M 9 19.122 -14.245 -40.021 1 72.57 ? C3' GDP 501 D 1 HETATM 14 O O3' GDP . . . M 9 18.931 -14.755 -38.7 1 76.44 ? O3' GDP 501 D 1 HETATM 15 C C2' GDP . . . M 9 17.845 -13.628 -40.586 1 72.37 ? C2' GDP 501 D 1 HETATM 16 O O2' GDP . . . M 9 16.657 -14.163 -39.993 1 79.78 ? O2' GDP 501 D 1 HETATM 17 C C1' GDP . . . M 9 18.004 -12.156 -40.271 1 58.63 ? C1' GDP 501 D 1 HETATM 18 N N9 GDP . . . M 9 17.414 -11.206 -41.231 1 68.37 ? N9 GDP 501 D 1 HETATM 19 C C8 GDP . . . M 9 17.917 -10.921 -42.45 1 68.03 ? C8 GDP 501 D 1 HETATM 20 N N7 GDP . . . M 9 17.168 -9.972 -43.071 1 68.39 ? N7 GDP 501 D 1 HETATM 21 C C5 GDP . . . M 9 16.175 -9.621 -42.237 1 61.76 ? C5 GDP 501 D 1 HETATM 22 C C6 GDP . . . M 9 15.04 -8.672 -42.269 1 74.07 ? C6 GDP 501 D 1 HETATM 23 O O6 GDP . . . M 9 14.8 -7.945 -43.257 1 83.96 ? O6 GDP 501 D 1 HETATM 24 N N1 GDP . . . M 9 14.251 -8.615 -41.196 1 69.08 ? N1 GDP 501 D 1 HETATM 25 C C2 GDP . . . M 9 14.448 -9.371 -40.108 1 63.78 ? C2 GDP 501 D 1 HETATM 26 N N2 GDP . . . M 9 13.568 -9.217 -39.083 1 61.46 ? N2 GDP 501 D 1 HETATM 27 N N3 GDP . . . M 9 15.475 -10.261 -40.007 1 60.86 ? N3 GDP 501 D 1 HETATM 28 C C4 GDP . . . M 9 16.35 -10.426 -41.018 1 61.92 ? C4 GDP 501 D 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #