data_5J56 # _model_server_result.job_id jpbM1ygH3N5MJwI2Fib8Mw _model_server_result.datetime_utc '2024-11-22 12:39:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j56 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 5J56 # _exptl.entry_id 5J56 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5J56 _cell.length_a 64.768 _cell.length_b 64.768 _cell.length_c 215.016 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J56 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 5J56 _atom_sites.fract_transf_matrix[1][1] 0.01544 _atom_sites.fract_transf_matrix[1][2] 0.008914 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017828 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004651 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PG4 A 1 301 1 PG4 PG4 . D 4 ACY A 1 302 2 ACY ACY . E 4 ACY A 1 303 3 ACY ACY . F 5 EDO A 1 304 4 EDO EDO . G 6 CL A 1 305 5 CL CL . H 6 CL A 1 306 6 CL CL . I 6 CL A 1 307 7 CL CL . J 7 HOH A 1 401 139 HOH HOH . J 7 HOH A 2 402 156 HOH HOH . J 7 HOH A 3 403 206 HOH HOH . J 7 HOH A 4 404 257 HOH HOH . J 7 HOH A 5 405 54 HOH HOH . J 7 HOH A 6 406 178 HOH HOH . J 7 HOH A 7 407 248 HOH HOH . J 7 HOH A 8 408 13 HOH HOH . J 7 HOH A 9 409 143 HOH HOH . J 7 HOH A 10 410 164 HOH HOH . J 7 HOH A 11 411 65 HOH HOH . J 7 HOH A 12 412 22 HOH HOH . J 7 HOH A 13 413 154 HOH HOH . J 7 HOH A 14 414 17 HOH HOH . J 7 HOH A 15 415 117 HOH HOH . J 7 HOH A 16 416 96 HOH HOH . J 7 HOH A 17 417 87 HOH HOH . J 7 HOH A 18 418 208 HOH HOH . J 7 HOH A 19 419 5 HOH HOH . J 7 HOH A 20 420 74 HOH HOH . J 7 HOH A 21 421 71 HOH HOH . J 7 HOH A 22 422 92 HOH HOH . J 7 HOH A 23 423 28 HOH HOH . J 7 HOH A 24 424 232 HOH HOH . J 7 HOH A 25 425 180 HOH HOH . J 7 HOH A 26 426 70 HOH HOH . J 7 HOH A 27 427 29 HOH HOH . J 7 HOH A 28 428 6 HOH HOH . J 7 HOH A 29 429 93 HOH HOH . J 7 HOH A 30 430 170 HOH HOH . J 7 HOH A 31 431 195 HOH HOH . J 7 HOH A 32 432 153 HOH HOH . J 7 HOH A 33 433 36 HOH HOH . J 7 HOH A 34 434 110 HOH HOH . J 7 HOH A 35 435 56 HOH HOH . J 7 HOH A 36 436 128 HOH HOH . J 7 HOH A 37 437 24 HOH HOH . J 7 HOH A 38 438 80 HOH HOH . J 7 HOH A 39 439 113 HOH HOH . J 7 HOH A 40 440 82 HOH HOH . J 7 HOH A 41 441 34 HOH HOH . J 7 HOH A 42 442 185 HOH HOH . J 7 HOH A 43 443 125 HOH HOH . J 7 HOH A 44 444 35 HOH HOH . J 7 HOH A 45 445 104 HOH HOH . J 7 HOH A 46 446 68 HOH HOH . J 7 HOH A 47 447 165 HOH HOH . J 7 HOH A 48 448 85 HOH HOH . J 7 HOH A 49 449 84 HOH HOH . J 7 HOH A 50 450 159 HOH HOH . J 7 HOH A 51 451 106 HOH HOH . J 7 HOH A 52 452 147 HOH HOH . J 7 HOH A 53 453 81 HOH HOH . J 7 HOH A 54 454 152 HOH HOH . J 7 HOH A 55 455 40 HOH HOH . J 7 HOH A 56 456 53 HOH HOH . J 7 HOH A 57 457 221 HOH HOH . J 7 HOH A 58 458 59 HOH HOH . J 7 HOH A 59 459 31 HOH HOH . J 7 HOH A 60 460 157 HOH HOH . J 7 HOH A 61 461 55 HOH HOH . J 7 HOH A 62 462 192 HOH HOH . J 7 HOH A 63 463 160 HOH HOH . J 7 HOH A 64 464 39 HOH HOH . J 7 HOH A 65 465 90 HOH HOH . J 7 HOH A 66 466 162 HOH HOH . J 7 HOH A 67 467 43 HOH HOH . J 7 HOH A 68 468 194 HOH HOH . J 7 HOH A 69 469 8 HOH HOH . J 7 HOH A 70 470 14 HOH HOH . J 7 HOH A 71 471 3 HOH HOH . J 7 HOH A 72 472 23 HOH HOH . J 7 HOH A 73 473 62 HOH HOH . J 7 HOH A 74 474 213 HOH HOH . J 7 HOH A 75 475 140 HOH HOH . J 7 HOH A 76 476 158 HOH HOH . J 7 HOH A 77 477 20 HOH HOH . J 7 HOH A 78 478 86 HOH HOH . J 7 HOH A 79 479 134 HOH HOH . J 7 HOH A 80 480 184 HOH HOH . J 7 HOH A 81 481 15 HOH HOH . J 7 HOH A 82 482 202 HOH HOH . J 7 HOH A 83 483 32 HOH HOH . J 7 HOH A 84 484 137 HOH HOH . J 7 HOH A 85 485 33 HOH HOH . J 7 HOH A 86 486 94 HOH HOH . J 7 HOH A 87 487 199 HOH HOH . J 7 HOH A 88 488 66 HOH HOH . J 7 HOH A 89 489 60 HOH HOH . J 7 HOH A 90 490 42 HOH HOH . J 7 HOH A 91 491 72 HOH HOH . J 7 HOH A 92 492 73 HOH HOH . J 7 HOH A 93 493 64 HOH HOH . J 7 HOH A 94 494 177 HOH HOH . J 7 HOH A 95 495 138 HOH HOH . J 7 HOH A 96 496 88 HOH HOH . J 7 HOH A 97 497 26 HOH HOH . J 7 HOH A 98 498 109 HOH HOH . J 7 HOH A 99 499 98 HOH HOH . J 7 HOH A 100 500 186 HOH HOH . J 7 HOH A 101 501 46 HOH HOH . J 7 HOH A 102 502 11 HOH HOH . J 7 HOH A 103 503 101 HOH HOH . J 7 HOH A 104 504 181 HOH HOH . J 7 HOH A 105 505 197 HOH HOH . J 7 HOH A 106 506 120 HOH HOH . J 7 HOH A 107 507 151 HOH HOH . J 7 HOH A 108 508 16 HOH HOH . J 7 HOH A 109 509 228 HOH HOH . J 7 HOH A 110 510 41 HOH HOH . J 7 HOH A 111 511 249 HOH HOH . J 7 HOH A 112 512 76 HOH HOH . J 7 HOH A 113 513 61 HOH HOH . J 7 HOH A 114 514 50 HOH HOH . J 7 HOH A 115 515 235 HOH HOH . J 7 HOH A 116 516 126 HOH HOH . J 7 HOH A 117 517 49 HOH HOH . J 7 HOH A 118 518 129 HOH HOH . J 7 HOH A 119 519 69 HOH HOH . J 7 HOH A 120 520 91 HOH HOH . J 7 HOH A 121 521 246 HOH HOH . J 7 HOH A 122 522 100 HOH HOH . J 7 HOH A 123 523 201 HOH HOH . J 7 HOH A 124 524 250 HOH HOH . J 7 HOH A 125 525 141 HOH HOH . J 7 HOH A 126 526 238 HOH HOH . J 7 HOH A 127 527 200 HOH HOH . J 7 HOH A 128 528 48 HOH HOH . J 7 HOH A 129 529 116 HOH HOH . J 7 HOH A 130 530 187 HOH HOH . J 7 HOH A 131 531 44 HOH HOH . J 7 HOH A 132 532 51 HOH HOH . J 7 HOH A 133 533 193 HOH HOH . J 7 HOH A 134 534 230 HOH HOH . J 7 HOH A 135 535 240 HOH HOH . J 7 HOH A 136 536 227 HOH HOH . J 7 HOH A 137 537 108 HOH HOH . J 7 HOH A 138 538 105 HOH HOH . J 7 HOH A 139 539 222 HOH HOH . J 7 HOH A 140 540 205 HOH HOH . J 7 HOH A 141 541 38 HOH HOH . J 7 HOH A 142 542 102 HOH HOH . J 7 HOH A 143 543 57 HOH HOH . J 7 HOH A 144 544 77 HOH HOH . J 7 HOH A 145 545 111 HOH HOH . J 7 HOH A 146 546 99 HOH HOH . J 7 HOH A 147 547 244 HOH HOH . J 7 HOH A 148 548 95 HOH HOH . J 7 HOH A 149 549 169 HOH HOH . J 7 HOH A 150 550 118 HOH HOH . J 7 HOH A 151 551 146 HOH HOH . J 7 HOH A 152 552 142 HOH HOH . J 7 HOH A 153 553 191 HOH HOH . J 7 HOH A 154 554 210 HOH HOH . J 7 HOH A 155 555 218 HOH HOH . J 7 HOH A 156 556 123 HOH HOH . J 7 HOH A 157 557 166 HOH HOH . K 7 HOH B 1 201 256 HOH HOH . K 7 HOH B 2 202 215 HOH HOH . K 7 HOH B 3 203 216 HOH HOH . K 7 HOH B 4 204 136 HOH HOH . K 7 HOH B 5 205 58 HOH HOH . K 7 HOH B 6 206 97 HOH HOH . K 7 HOH B 7 207 133 HOH HOH . K 7 HOH B 8 208 225 HOH HOH . K 7 HOH B 9 209 179 HOH HOH . K 7 HOH B 10 210 7 HOH HOH . K 7 HOH B 11 211 188 HOH HOH . K 7 HOH B 12 212 171 HOH HOH . K 7 HOH B 13 213 135 HOH HOH . K 7 HOH B 14 214 10 HOH HOH . K 7 HOH B 15 215 67 HOH HOH . K 7 HOH B 16 216 183 HOH HOH . K 7 HOH B 17 217 219 HOH HOH . K 7 HOH B 18 218 231 HOH HOH . K 7 HOH B 19 219 4 HOH HOH . K 7 HOH B 20 220 45 HOH HOH . K 7 HOH B 21 221 9 HOH HOH . K 7 HOH B 22 222 107 HOH HOH . K 7 HOH B 23 223 174 HOH HOH . K 7 HOH B 24 224 121 HOH HOH . K 7 HOH B 25 225 251 HOH HOH . K 7 HOH B 26 226 220 HOH HOH . K 7 HOH B 27 227 131 HOH HOH . K 7 HOH B 28 228 79 HOH HOH . K 7 HOH B 29 229 241 HOH HOH . K 7 HOH B 30 230 27 HOH HOH . K 7 HOH B 31 231 63 HOH HOH . K 7 HOH B 32 232 211 HOH HOH . K 7 HOH B 33 233 190 HOH HOH . K 7 HOH B 34 234 124 HOH HOH . K 7 HOH B 35 235 47 HOH HOH . K 7 HOH B 36 236 130 HOH HOH . K 7 HOH B 37 237 12 HOH HOH . K 7 HOH B 38 238 18 HOH HOH . K 7 HOH B 39 239 161 HOH HOH . K 7 HOH B 40 240 148 HOH HOH . K 7 HOH B 41 241 122 HOH HOH . K 7 HOH B 42 242 182 HOH HOH . K 7 HOH B 43 243 145 HOH HOH . K 7 HOH B 44 244 37 HOH HOH . K 7 HOH B 45 245 83 HOH HOH . K 7 HOH B 46 246 149 HOH HOH . K 7 HOH B 47 247 207 HOH HOH . K 7 HOH B 48 248 89 HOH HOH . K 7 HOH B 49 249 172 HOH HOH . K 7 HOH B 50 250 144 HOH HOH . K 7 HOH B 51 251 114 HOH HOH . K 7 HOH B 52 252 254 HOH HOH . K 7 HOH B 53 253 224 HOH HOH . K 7 HOH B 54 254 75 HOH HOH . K 7 HOH B 55 255 132 HOH HOH . K 7 HOH B 56 256 233 HOH HOH . K 7 HOH B 57 257 112 HOH HOH . K 7 HOH B 58 258 78 HOH HOH . K 7 HOH B 59 259 236 HOH HOH . K 7 HOH B 60 260 252 HOH HOH . K 7 HOH B 61 261 115 HOH HOH . K 7 HOH B 62 262 242 HOH HOH . K 7 HOH B 63 263 253 HOH HOH . K 7 HOH B 64 264 196 HOH HOH . K 7 HOH B 65 265 103 HOH HOH . K 7 HOH B 66 266 52 HOH HOH . K 7 HOH B 67 267 173 HOH HOH . K 7 HOH B 68 268 209 HOH HOH . K 7 HOH B 69 269 19 HOH HOH . K 7 HOH B 70 270 167 HOH HOH . K 7 HOH B 71 271 175 HOH HOH . K 7 HOH B 72 272 234 HOH HOH . K 7 HOH B 73 273 127 HOH HOH . K 7 HOH B 74 274 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . D 4 14.592 20.996 -7.322 1 48.27 ? C ACY 302 A 1 HETATM 2 O O ACY . . . D 4 15.445 21.973 -7.572 1 46.19 ? O ACY 302 A 1 HETATM 3 O OXT ACY . . . D 4 14.926 19.763 -7.321 1 50.91 ? OXT ACY 302 A 1 HETATM 4 C CH3 ACY . . . D 4 13.092 21.184 -7.008 1 36.8 ? CH3 ACY 302 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #