data_5J5X # _model_server_result.job_id k7P5ibWmX5RE0fkaIVe9WQ _model_server_result.datetime_utc '2024-11-14 17:57:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j5x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 5J5X # _exptl.entry_id 5J5X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5J5X _cell.length_a 127.023 _cell.length_b 127.023 _cell.length_c 89.631 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J5X _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TRP 197 A TRP 196 1_555 A N TPO 198 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C TPO 198 A TPO 197 1_555 A N LEU 199 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C VAL 338 A VAL 337 1_555 A N SEP 339 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C SEP 339 A SEP 338 1_555 A N ILE 340 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 B N1 6J9 1 B 6J9 1 1_555 B C9 ZEU 2 B ZEU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale6 B C1 ZEU 2 B ZEU 2 1_555 B N DAL 3 B DAL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale7 B C DAL 3 B DAL 3 1_555 B N DAR 4 B DAR 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale8 B C DAR 4 B DAR 4 1_555 B N DAR 5 B DAR 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale9 B C DAR 5 B DAR 5 1_555 B N DAR 6 B DAR 6 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.334 ? covale ? covale10 B C DAR 5 B DAR 5 1_555 B N DAR 6 B DAR 6 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.333 ? covale ? covale11 B C DAR 5 B DAR 5 1_555 B N DAR 6 B DAR 6 1_555 ? ? ? ? C ? ? ? ? ? ? ? 1.335 ? covale ? covale12 B C DAR 6 B DAR 6 1_555 B N DAR 7 B DAR 7 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale13 B C DAR 6 B DAR 6 1_555 B N DAR 7 B DAR 7 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale14 B C DAR 6 B DAR 6 1_555 B N DAR 7 B DAR 7 1_555 ? C ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 B C DAR 7 B DAR 7 1_555 B N NH2 8 B NH2 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5J5X _atom_sites.fract_transf_matrix[1][1] 0.007873 _atom_sites.fract_transf_matrix[1][2] 0.004545 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00909 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011157 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 401 1 SO4 SO4 . D 3 SO4 A 1 402 2 SO4 SO4 . E 3 SO4 A 1 403 3 SO4 SO4 . F 4 6J9 A 1 404 1 6J9 47P . G 5 HOH A 1 501 7 HOH HOH . G 5 HOH A 2 502 16 HOH HOH . G 5 HOH A 3 503 20 HOH HOH . G 5 HOH A 4 504 17 HOH HOH . G 5 HOH A 5 505 18 HOH HOH . G 5 HOH A 6 506 2 HOH HOH . G 5 HOH A 7 507 23 HOH HOH . G 5 HOH A 8 508 5 HOH HOH . G 5 HOH A 9 509 26 HOH HOH . G 5 HOH A 10 510 4 HOH HOH . G 5 HOH A 11 511 8 HOH HOH . G 5 HOH A 12 512 12 HOH HOH . G 5 HOH A 13 513 3 HOH HOH . G 5 HOH A 14 514 19 HOH HOH . G 5 HOH A 15 515 1 HOH HOH . G 5 HOH A 16 516 25 HOH HOH . G 5 HOH A 17 517 21 HOH HOH . G 5 HOH A 18 518 24 HOH HOH . G 5 HOH A 19 519 10 HOH HOH . G 5 HOH A 20 520 11 HOH HOH . G 5 HOH A 21 521 13 HOH HOH . G 5 HOH A 22 522 6 HOH HOH . G 5 HOH A 23 523 14 HOH HOH . H 5 HOH B 1 201 22 HOH HOH . H 5 HOH B 2 202 9 HOH HOH . H 5 HOH B 3 203 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 3 -34.939 53.152 -4.176 1 121.07 ? S SO4 403 A 1 HETATM 2 O O1 SO4 . . . E 3 -34.633 52.061 -5.132 1 115.91 ? O1 SO4 403 A 1 HETATM 3 O O2 SO4 . . . E 3 -34.036 54.297 -4.425 1 119.63 ? O2 SO4 403 A 1 HETATM 4 O O3 SO4 . . . E 3 -34.747 52.682 -2.783 1 116.21 ? O3 SO4 403 A 1 HETATM 5 O O4 SO4 . . . E 3 -36.34 53.59 -4.37 1 118.88 ? O4 SO4 403 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 40 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #