data_5J7G
#
_model_server_result.job_id            felGaLMMpHmqN2zeSTcduw 
_model_server_result.datetime_utc      '2024-10-28 02:22:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5j7g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":201}' 
#
_entry.id    5J7G 
#
_exptl.entry_id    5J7G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              679.565 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-({6-[(6-chloro-3-{1-[(4-chlorophenyl)methyl]-4-(4-fluorophenyl)-1H-imidazol-5-yl}-1H-indole-2-carbonyl)oxy]hexyl}amino)-4-oxobutanoic acid' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5J7G 
_cell.length_a            36.75 
_cell.length_b            74.301 
_cell.length_c            171.4 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5J7G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,I 1 1 
D,H,L 1 2 
B,C,F,G,J,K 2 1 
D,H,L 3 1 
C,G,K 3 3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 74.301 0 
3 'crystal symmetry operation' 3_854 -x+3,y+1/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 110.25 37.1505 -85.7 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C35 H33 Cl2 F N4 O5' 
_chem_comp.formula_weight    679.565 
_chem_comp.id                6GG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-({6-[(6-chloro-3-{1-[(4-chlorophenyl)methyl]-4-(4-fluorophenyl)-1H-imidazol-5-yl}-1H-indole-2-carbonyl)oxy]hexyl}amino)-4-oxobutanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O28 C25 6GG doub 1 n n 
C25 O26 6GG sing 2 n n 
C25 C24 6GG sing 3 n n 
C24 C23 6GG sing 4 n n 
C23 C21 6GG sing 5 n n 
C21 N20 6GG sing 6 n n 
C21 O22 6GG doub 7 n n 
F C40 6GG sing 8 n n 
N20 C19 6GG sing 9 n n 
C41 C40 6GG doub 10 n y 
C41 C42 6GG sing 11 n y 
C40 C39 6GG sing 12 n y 
C19 C17 6GG sing 13 n n 
C17 C16 6GG sing 14 n n 
C42 C37 6GG doub 15 n y 
C39 C38 6GG doub 16 n y 
C16 C13 6GG sing 17 n n 
C13 C12 6GG sing 18 n n 
C37 C38 6GG sing 19 n y 
C37 C15 6GG sing 20 n n 
N16 C15 6GG sing 21 n y 
N16 C18 6GG doub 22 n y 
C12 C3 6GG sing 23 n n 
C15 C14 6GG doub 24 n y 
C18 N13 6GG sing 25 n y 
C14 N13 6GG sing 26 n y 
C14 C44 6GG sing 27 n n 
C3 O1 6GG sing 28 n n 
O1 C60 6GG sing 29 n n 
N13 C5 6GG sing 30 n n 
C44 C45 6GG sing 31 n y 
C44 C48 6GG doub 32 n y 
C60 C48 6GG sing 33 n n 
C60 O2 6GG doub 34 n n 
C59 C45 6GG doub 35 n y 
C59 C58 6GG sing 36 n y 
C45 C46 6GG sing 37 n y 
C48 N49 6GG sing 38 n y 
C5 C6 6GG sing 39 n n 
C58 C57 6GG doub 40 n y 
N49 C46 6GG sing 41 n y 
C46 C56 6GG doub 42 n y 
C57 C56 6GG sing 43 n y 
C57 CL1 6GG sing 44 n n 
C11 C6 6GG doub 45 n y 
C11 C10 6GG sing 46 n y 
C6 C7 6GG sing 47 n y 
C10 C9 6GG doub 48 n y 
C7 C8 6GG doub 49 n y 
C9 C8 6GG sing 50 n y 
C9 CL2 6GG sing 51 n n 
O26 H1 6GG sing 52 n n 
C24 H2 6GG sing 53 n n 
C24 H3 6GG sing 54 n n 
C23 H4 6GG sing 55 n n 
C23 H5 6GG sing 56 n n 
N20 H6 6GG sing 57 n n 
C19 H7 6GG sing 58 n n 
C19 H8 6GG sing 59 n n 
C17 H9 6GG sing 60 n n 
C17 H10 6GG sing 61 n n 
C16 H11 6GG sing 62 n n 
C16 H12 6GG sing 63 n n 
C13 H13 6GG sing 64 n n 
C13 H14 6GG sing 65 n n 
C12 H15 6GG sing 66 n n 
C12 H16 6GG sing 67 n n 
C3 H17 6GG sing 68 n n 
C3 H18 6GG sing 69 n n 
N49 H19 6GG sing 70 n n 
C56 H20 6GG sing 71 n n 
C59 H21 6GG sing 72 n n 
C58 H22 6GG sing 73 n n 
C5 H23 6GG sing 74 n n 
C5 H24 6GG sing 75 n n 
C7 H25 6GG sing 76 n n 
C8 H26 6GG sing 77 n n 
C10 H27 6GG sing 78 n n 
C11 H28 6GG sing 79 n n 
C18 H29 6GG sing 80 n n 
C38 H30 6GG sing 81 n n 
C39 H31 6GG sing 82 n n 
C41 H32 6GG sing 83 n n 
C42 H33 6GG sing 84 n n 
#
_atom_sites.entry_id                     5J7G 
_atom_sites.fract_transf_matrix[1][1]    0.027211 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013459 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005834 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 6GG A 1 201 2 6GG m30 . 
F 2 6GG B 1 201 3 6GG m30 . 
G 2 6GG C 1 201 4 6GG m30 . 
H 2 6GG D 1 201 1 6GG m30 . 
I 3 HOH A 1 301 207 HOH HOH . 
I 3 HOH A 2 302 167 HOH HOH . 
I 3 HOH A 3 303 206 HOH HOH . 
I 3 HOH A 4 304 3 HOH HOH . 
I 3 HOH A 5 305 191 HOH HOH . 
I 3 HOH A 6 306 100 HOH HOH . 
I 3 HOH A 7 307 166 HOH HOH . 
I 3 HOH A 8 308 128 HOH HOH . 
I 3 HOH A 9 309 170 HOH HOH . 
I 3 HOH A 10 310 2 HOH HOH . 
I 3 HOH A 11 311 39 HOH HOH . 
I 3 HOH A 12 312 173 HOH HOH . 
I 3 HOH A 13 313 130 HOH HOH . 
I 3 HOH A 14 314 102 HOH HOH . 
I 3 HOH A 15 315 172 HOH HOH . 
J 3 HOH B 1 301 90 HOH HOH . 
J 3 HOH B 2 302 5 HOH HOH . 
J 3 HOH B 3 303 198 HOH HOH . 
J 3 HOH B 4 304 81 HOH HOH . 
J 3 HOH B 5 305 134 HOH HOH . 
J 3 HOH B 6 306 205 HOH HOH . 
J 3 HOH B 7 307 48 HOH HOH . 
J 3 HOH B 8 308 137 HOH HOH . 
J 3 HOH B 9 309 165 HOH HOH . 
J 3 HOH B 10 310 135 HOH HOH . 
J 3 HOH B 11 311 10 HOH HOH . 
J 3 HOH B 12 312 151 HOH HOH . 
J 3 HOH B 13 313 105 HOH HOH . 
J 3 HOH B 14 314 193 HOH HOH . 
J 3 HOH B 15 315 88 HOH HOH . 
J 3 HOH B 16 316 11 HOH HOH . 
J 3 HOH B 17 317 12 HOH HOH . 
J 3 HOH B 18 318 152 HOH HOH . 
J 3 HOH B 19 319 107 HOH HOH . 
J 3 HOH B 20 320 174 HOH HOH . 
J 3 HOH B 21 321 6 HOH HOH . 
J 3 HOH B 22 322 177 HOH HOH . 
J 3 HOH B 23 323 155 HOH HOH . 
J 3 HOH B 24 324 85 HOH HOH . 
J 3 HOH B 25 325 156 HOH HOH . 
J 3 HOH B 26 326 163 HOH HOH . 
J 3 HOH B 27 327 162 HOH HOH . 
K 3 HOH C 1 301 182 HOH HOH . 
K 3 HOH C 2 302 202 HOH HOH . 
K 3 HOH C 3 303 185 HOH HOH . 
K 3 HOH C 4 304 142 HOH HOH . 
K 3 HOH C 5 305 42 HOH HOH . 
K 3 HOH C 6 306 96 HOH HOH . 
K 3 HOH C 7 307 14 HOH HOH . 
K 3 HOH C 8 308 110 HOH HOH . 
K 3 HOH C 9 309 194 HOH HOH . 
K 3 HOH C 10 310 181 HOH HOH . 
K 3 HOH C 11 311 97 HOH HOH . 
K 3 HOH C 12 312 99 HOH HOH . 
K 3 HOH C 13 313 136 HOH HOH . 
K 3 HOH C 14 314 13 HOH HOH . 
K 3 HOH C 15 315 199 HOH HOH . 
K 3 HOH C 16 316 154 HOH HOH . 
K 3 HOH C 17 317 57 HOH HOH . 
K 3 HOH C 18 318 186 HOH HOH . 
K 3 HOH C 19 319 111 HOH HOH . 
K 3 HOH C 20 320 53 HOH HOH . 
K 3 HOH C 21 321 120 HOH HOH . 
K 3 HOH C 22 322 104 HOH HOH . 
L 3 HOH D 1 301 29 HOH HOH . 
L 3 HOH D 2 302 192 HOH HOH . 
L 3 HOH D 3 303 158 HOH HOH . 
L 3 HOH D 4 304 157 HOH HOH . 
L 3 HOH D 5 305 19 HOH HOH . 
L 3 HOH D 6 306 71 HOH HOH . 
L 3 HOH D 7 307 22 HOH HOH . 
L 3 HOH D 8 308 17 HOH HOH . 
L 3 HOH D 9 309 21 HOH HOH . 
L 3 HOH D 10 310 69 HOH HOH . 
L 3 HOH D 11 311 188 HOH HOH . 
L 3 HOH D 12 312 197 HOH HOH . 
L 3 HOH D 13 313 72 HOH HOH . 
L 3 HOH D 14 314 203 HOH HOH . 
L 3 HOH D 15 315 73 HOH HOH . 
L 3 HOH D 16 316 195 HOH HOH . 
L 3 HOH D 17 317 70 HOH HOH . 
L 3 HOH D 18 318 196 HOH HOH . 
L 3 HOH D 19 319 141 HOH HOH . 
L 3 HOH D 20 320 121 HOH HOH . 
L 3 HOH D 21 321 149 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O28 6GG . . . H 2 57.058 52.927 -46.518 1 64 ? O28 6GG 201 D 1 
HETATM 2 C C25 6GG . . . H 2 57.684 51.881 -46.343 1 65.22 ? C25 6GG 201 D 1 
HETATM 3 O O26 6GG . . . H 2 58.356 51.454 -47.397 1 80.42 ? O26 6GG 201 D 1 
HETATM 4 C C24 6GG . . . H 2 57.647 51.118 -45.005 1 54.01 ? C24 6GG 201 D 1 
HETATM 5 C C23 6GG . . . H 2 58.734 50.082 -44.729 1 49.74 ? C23 6GG 201 D 1 
HETATM 6 C C21 6GG . . . H 2 59.008 50.033 -43.254 1 47.19 ? C21 6GG 201 D 1 
HETATM 7 O O22 6GG . . . H 2 59.087 51.04 -42.582 1 47.57 ? O22 6GG 201 D 1 
HETATM 8 N N20 6GG . . . H 2 59.141 49.003 -42.503 1 47.21 ? N20 6GG 201 D 1 
HETATM 9 C C19 6GG . . . H 2 59.168 47.652 -42.761 1 44.2 ? C19 6GG 201 D 1 
HETATM 10 C C17 6GG . . . H 2 58.56 46.935 -41.571 1 37.87 ? C17 6GG 201 D 1 
HETATM 11 C C16 6GG . . . H 2 59.462 46.288 -40.511 1 42.54 ? C16 6GG 201 D 1 
HETATM 12 C C13 6GG . . . H 2 58.745 45.019 -40.174 1 34.37 ? C13 6GG 201 D 1 
HETATM 13 C C12 6GG . . . H 2 59.494 43.978 -39.407 1 42.3 ? C12 6GG 201 D 1 
HETATM 14 C C3 6GG . . . H 2 59.354 44.044 -37.912 1 38.21 ? C3 6GG 201 D 1 
HETATM 15 O O1 6GG . . . H 2 57.988 44.252 -37.528 1 39.38 ? O1 6GG 201 D 1 
HETATM 16 C C60 6GG . . . H 2 57.43 43.464 -36.491 1 40.08 ? C60 6GG 201 D 1 
HETATM 17 O O2 6GG . . . H 2 58.01 42.54 -35.973 1 45.47 ? O2 6GG 201 D 1 
HETATM 18 C C48 6GG . . . H 2 56.031 43.681 -36.182 1 36.85 ? C48 6GG 201 D 1 
HETATM 19 N N49 6GG . . . H 2 55.302 42.985 -35.323 1 34.18 ? N49 6GG 201 D 1 
HETATM 20 C C46 6GG . . . H 2 54.025 43.405 -35.322 1 34.98 ? C46 6GG 201 D 1 
HETATM 21 C C56 6GG . . . H 2 52.944 43.013 -34.585 1 33.95 ? C56 6GG 201 D 1 
HETATM 22 C C57 6GG . . . H 2 51.744 43.668 -34.782 1 31.47 ? C57 6GG 201 D 1 
HETATM 23 CL CL1 6GG . . . H 2 50.351 43.112 -33.821 1 36.08 ? CL1 6GG 201 D 1 
HETATM 24 C C44 6GG . . . H 2 55.198 44.66 -36.881 1 35.29 ? C44 6GG 201 D 1 
HETATM 25 C C45 6GG . . . H 2 53.857 44.508 -36.288 1 33.16 ? C45 6GG 201 D 1 
HETATM 26 C C59 6GG . . . H 2 52.653 45.138 -36.463 1 37.13 ? C59 6GG 201 D 1 
HETATM 27 C C58 6GG . . . H 2 51.58 44.727 -35.691 1 34.56 ? C58 6GG 201 D 1 
HETATM 28 C C14 6GG . . . H 2 55.475 45.735 -37.873 1 33.89 ? C14 6GG 201 D 1 
HETATM 29 N N13 6GG . . . H 2 56.103 46.859 -37.611 1 40.82 ? N13 6GG 201 D 1 
HETATM 30 C C5 6GG . . . H 2 56.829 47.236 -36.403 1 41.49 ? C5 6GG 201 D 1 
HETATM 31 C C6 6GG . . . H 2 55.939 47.336 -35.205 1 39.29 ? C6 6GG 201 D 1 
HETATM 32 C C7 6GG . . . H 2 56.408 46.829 -33.979 1 43.65 ? C7 6GG 201 D 1 
HETATM 33 C C8 6GG . . . H 2 55.602 46.916 -32.846 1 37.83 ? C8 6GG 201 D 1 
HETATM 34 C C9 6GG . . . H 2 54.361 47.486 -32.948 1 37.59 ? C9 6GG 201 D 1 
HETATM 35 CL CL2 6GG . . . H 2 53.275 47.713 -31.517 1 41 ? CL2 6GG 201 D 1 
HETATM 36 C C10 6GG . . . H 2 53.884 47.972 -34.195 1 38.46 ? C10 6GG 201 D 1 
HETATM 37 C C11 6GG . . . H 2 54.688 47.897 -35.315 1 36.03 ? C11 6GG 201 D 1 
HETATM 38 C C18 6GG . . . H 2 56.034 47.664 -38.681 1 38.32 ? C18 6GG 201 D 1 
HETATM 39 N N16 6GG . . . H 2 55.373 47.057 -39.687 1 38.07 ? N16 6GG 201 D 1 
HETATM 40 C C15 6GG . . . H 2 54.919 45.848 -39.21 1 37.54 ? C15 6GG 201 D 1 
HETATM 41 C C37 6GG . . . H 2 54.193 44.873 -39.996 1 33.24 ? C37 6GG 201 D 1 
HETATM 42 C C38 6GG . . . H 2 53.355 45.295 -41.02 1 35.1 ? C38 6GG 201 D 1 
HETATM 43 C C39 6GG . . . H 2 52.7 44.372 -41.818 1 33.17 ? C39 6GG 201 D 1 
HETATM 44 C C40 6GG . . . H 2 52.936 43.021 -41.612 1 37.65 ? C40 6GG 201 D 1 
HETATM 45 F F 6GG . . . H 2 52.357 42.073 -42.374 1 39.75 ? F 6GG 201 D 1 
HETATM 46 C C41 6GG . . . H 2 53.796 42.617 -40.579 1 36.26 ? C41 6GG 201 D 1 
HETATM 47 C C42 6GG . . . H 2 54.466 43.563 -39.788 1 33.96 ? C42 6GG 201 D 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           47 
#