data_5J7S # _model_server_result.job_id qG4OnFcvTBlRiqdfVjBUCQ _model_server_result.datetime_utc '2024-11-28 08:59:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j7s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5J7S # _exptl.entry_id 5J7S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 465.978 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)amino]phenyl}propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5J7S _cell.length_a 58.234 _cell.length_b 134.06 _cell.length_c 146.814 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J7S _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 148 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 174 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C31 _struct_conn.ptnr2_label_comp_id 6H3 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 6H3 _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.617 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H28 Cl N7 O' _chem_comp.formula_weight 465.978 _chem_comp.id 6H3 _chem_comp.mon_nstd_flag . _chem_comp.name N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)amino]phenyl}propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N02 6H3 sing 1 n n C05 N02 6H3 sing 2 n n C05 C06 6H3 sing 3 n n N02 C03 6H3 sing 4 n n C03 C04 6H3 sing 5 n n C06 N07 6H3 sing 6 n n N07 C04 6H3 sing 7 n n N07 C08 6H3 sing 8 n n C26 C25 6H3 doub 9 n y C26 C27 6H3 sing 10 n y C25 C24 6H3 sing 11 n y C11 C08 6H3 doub 12 n y C11 C12 6H3 sing 13 n y C08 C09 6H3 sing 14 n y N28 C27 6H3 sing 15 n n N28 C29 6H3 sing 16 n n C31 C30 6H3 sing 17 n n C27 C22 6H3 doub 18 n y C12 C13 6H3 doub 19 n y C24 C23 6H3 doub 20 n y C09 C10 6H3 doub 21 n y C30 C29 6H3 sing 22 n n C29 O32 6H3 doub 23 n n C22 C23 6H3 sing 24 n y C22 N21 6H3 sing 25 n n C13 C10 6H3 sing 26 n y C13 N14 6H3 sing 27 n n N21 C20 6H3 sing 28 n n N33 C20 6H3 doub 29 n y N33 C15 6H3 sing 30 n y N14 C15 6H3 sing 31 n n C20 C18 6H3 sing 32 n y C15 N16 6H3 doub 33 n y C18 C17 6H3 doub 34 n y C18 CL19 6H3 sing 35 n n N16 C17 6H3 sing 36 n y C12 H1 6H3 sing 37 n n C17 H2 6H3 sing 38 n n C11 H3 6H3 sing 39 n n C10 H4 6H3 sing 40 n n C01 H5 6H3 sing 41 n n C01 H6 6H3 sing 42 n n C01 H7 6H3 sing 43 n n C03 H9 6H3 sing 44 n n C03 H10 6H3 sing 45 n n C04 H11 6H3 sing 46 n n C04 H12 6H3 sing 47 n n C05 H13 6H3 sing 48 n n C05 H14 6H3 sing 49 n n C06 H15 6H3 sing 50 n n C06 H16 6H3 sing 51 n n C09 H17 6H3 sing 52 n n N14 H18 6H3 sing 53 n n N21 H19 6H3 sing 54 n n C23 H20 6H3 sing 55 n n C24 H21 6H3 sing 56 n n C25 H22 6H3 sing 57 n n C26 H23 6H3 sing 58 n n N28 H24 6H3 sing 59 n n C30 H25 6H3 sing 60 n n C30 H26 6H3 sing 61 n n C31 H27 6H3 sing 62 n n C31 H28 6H3 sing 63 n n C31 H29 6H3 sing 64 n n # _atom_sites.entry_id 5J7S _atom_sites.fract_transf_matrix[1][1] 0.017172 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006811 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 6H3 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 6H3 _pdbx_nonpoly_scheme.auth_mon_id SM1 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 6H3 . . . B 2 -11.522 -48.06 -15.507 1 86.4 ? C18 6H3 601 A 1 HETATM 2 C C13 6H3 . . . B 2 -16.258 -47.888 -17.69 1 82.13 ? C13 6H3 601 A 1 HETATM 3 C C12 6H3 . . . B 2 -15.774 -48.935 -18.474 1 84.27 ? C12 6H3 601 A 1 HETATM 4 C C17 6H3 . . . B 2 -12.124 -46.845 -15.179 1 90.9 ? C17 6H3 601 A 1 HETATM 5 C C15 6H3 . . . B 2 -14.006 -47.497 -16.362 1 91.77 ? C15 6H3 601 A 1 HETATM 6 C C11 6H3 . . . B 2 -16.639 -49.634 -19.325 1 81.38 ? C11 6H3 601 A 1 HETATM 7 C C10 6H3 . . . B 2 -17.599 -47.539 -17.759 1 87.37 ? C10 6H3 601 A 1 HETATM 8 C C22 6H3 . . . B 2 -12.192 -51.159 -17.631 1 89.75 ? C22 6H3 601 A 1 HETATM 9 C C20 6H3 . . . B 2 -12.222 -48.988 -16.287 1 84.77 ? C20 6H3 601 A 1 HETATM 10 C C01 6H3 . . . B 2 -21.403 -51.96 -22.746 1 93.76 ? C01 6H3 601 A 1 HETATM 11 N N02 6H3 . . . B 2 -20.854 -51.591 -21.647 1 95.54 ? N02 6H3 601 A 1 HETATM 12 C C03 6H3 . . . B 2 -21.055 -50.245 -21.469 1 86.06 ? C03 6H3 601 A 1 HETATM 13 C C04 6H3 . . . B 2 -20.313 -49.69 -20.251 1 89.72 ? C04 6H3 601 A 1 HETATM 14 C C05 6H3 . . . B 2 -19.528 -51.951 -21.657 1 81.14 ? C05 6H3 601 A 1 HETATM 15 C C06 6H3 . . . B 2 -18.78 -51.451 -20.424 1 84.01 ? C06 6H3 601 A 1 HETATM 16 N N07 6H3 . . . B 2 -18.897 -50.009 -20.267 1 94.77 ? N07 6H3 601 A 1 HETATM 17 C C08 6H3 . . . B 2 -17.977 -49.279 -19.387 1 84.39 ? C08 6H3 601 A 1 HETATM 18 C C09 6H3 . . . B 2 -18.467 -48.232 -18.61 1 81.13 ? C09 6H3 601 A 1 HETATM 19 N N14 6H3 . . . B 2 -15.372 -47.113 -16.786 1 85.42 ? N14 6H3 601 A 1 HETATM 20 N N16 6H3 . . . B 2 -13.36 -46.61 -15.624 1 94.84 ? N16 6H3 601 A 1 HETATM 21 CL CL19 6H3 . . . B 2 -9.865 -48.396 -14.933 1 105.43 ? CL19 6H3 601 A 1 HETATM 22 N N21 6H3 . . . B 2 -11.586 -50.271 -16.652 1 88.72 ? N21 6H3 601 A 1 HETATM 23 C C23 6H3 . . . B 2 -13.494 -51.59 -17.454 1 93.49 ? C23 6H3 601 A 1 HETATM 24 C C24 6H3 . . . B 2 -14.084 -52.441 -18.38 1 96.33 ? C24 6H3 601 A 1 HETATM 25 C C25 6H3 . . . B 2 -13.362 -52.862 -19.496 1 94.8 ? C25 6H3 601 A 1 HETATM 26 C C26 6H3 . . . B 2 -12.058 -52.43 -19.679 1 94.34 ? C26 6H3 601 A 1 HETATM 27 C C27 6H3 . . . B 2 -11.465 -51.586 -18.758 1 92.33 ? C27 6H3 601 A 1 HETATM 28 N N28 6H3 . . . B 2 -10.07 -51.15 -18.998 1 88.68 ? N28 6H3 601 A 1 HETATM 29 C C29 6H3 . . . B 2 -8.97 -51.467 -18.056 1 94.49 ? C29 6H3 601 A 1 HETATM 30 C C30 6H3 . . . B 2 -7.531 -50.992 -18.372 1 96.79 ? C30 6H3 601 A 1 HETATM 31 C C31 6H3 . . . B 2 -6.952 -50.056 -17.305 1 106.46 ? C31 6H3 601 A 1 HETATM 32 O O32 6H3 . . . B 2 -9.187 -52.078 -17.065 1 100.76 ? O32 6H3 601 A 1 HETATM 33 N N33 6H3 . . . B 2 -13.454 -48.677 -16.698 1 88.07 ? N33 6H3 601 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 374 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 33 #