data_5J99
#
_model_server_result.job_id            VNwag0ojSPxxFY3PZs7-cw 
_model_server_result.datetime_utc      '2024-11-25 12:33:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5j99 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    5J99 
#
_exptl.entry_id    5J99 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              175.209 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ARGININE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5J99 
_cell.length_a            63.871 
_cell.length_b            66.035 
_cell.length_c            86.838 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5J99 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O3B ADP . A ADP 401 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
metalc ? metalc2 B O2A ADP . A ADP 401 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
metalc ? metalc3 D O1 NO3 . A NO3 403 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? 
metalc ? metalc4 E MG MG . A MG 404 1_555 F O HOH . A HOH 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc5 E MG MG . A MG 404 1_555 F O HOH . A HOH 566 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc6 E MG MG . A MG 404 1_555 F O HOH . A HOH 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
#
_chem_comp.formula           'C6 H15 N4 O2 1' 
_chem_comp.formula_weight    175.209 
_chem_comp.id                ARG 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              ARGININE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA ARG sing 57 n n 
N H ARG sing 58 n n 
N H2 ARG sing 59 n n 
CA C ARG sing 60 n n 
CA CB ARG sing 61 n n 
CA HA ARG sing 62 n n 
C O ARG doub 63 n n 
C OXT ARG sing 64 n n 
CB CG ARG sing 65 n n 
CB HB2 ARG sing 66 n n 
CB HB3 ARG sing 67 n n 
CG CD ARG sing 68 n n 
CG HG2 ARG sing 69 n n 
CG HG3 ARG sing 70 n n 
CD NE ARG sing 71 n n 
CD HD2 ARG sing 72 n n 
CD HD3 ARG sing 73 n n 
NE CZ ARG sing 74 n n 
NE HE ARG sing 75 n n 
CZ NH1 ARG sing 76 n n 
CZ NH2 ARG doub 77 n n 
NH1 HH11 ARG sing 78 n n 
NH1 HH12 ARG sing 79 n n 
NH2 HH21 ARG sing 80 n n 
NH2 HH22 ARG sing 81 n n 
OXT HXT ARG sing 82 n n 
#
_atom_sites.entry_id                     5J99 
_atom_sites.fract_transf_matrix[1][1]    0.015657 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015143 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011516 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ADP A 1 401 400 ADP ADP . 
C 3 ARG A 1 402 403 ARG ARG . 
D 4 NO3 A 1 403 405 NO3 NO3 . 
E 5 MG A 1 404 408 MG MG . 
F 6 HOH A 1 501 215 HOH HOH . 
F 6 HOH A 2 502 161 HOH HOH . 
F 6 HOH A 3 503 224 HOH HOH . 
F 6 HOH A 4 504 216 HOH HOH . 
F 6 HOH A 5 505 220 HOH HOH . 
F 6 HOH A 6 506 209 HOH HOH . 
F 6 HOH A 7 507 176 HOH HOH . 
F 6 HOH A 8 508 27 HOH HOH . 
F 6 HOH A 9 509 182 HOH HOH . 
F 6 HOH A 10 510 97 HOH HOH . 
F 6 HOH A 11 511 108 HOH HOH . 
F 6 HOH A 12 512 201 HOH HOH . 
F 6 HOH A 13 513 167 HOH HOH . 
F 6 HOH A 14 514 37 HOH HOH . 
F 6 HOH A 15 515 58 HOH HOH . 
F 6 HOH A 16 516 203 HOH HOH . 
F 6 HOH A 17 517 72 HOH HOH . 
F 6 HOH A 18 518 52 HOH HOH . 
F 6 HOH A 19 519 2 HOH HOH . 
F 6 HOH A 20 520 81 HOH HOH . 
F 6 HOH A 21 521 66 HOH HOH . 
F 6 HOH A 22 522 129 HOH HOH . 
F 6 HOH A 23 523 93 HOH HOH . 
F 6 HOH A 24 524 137 HOH HOH . 
F 6 HOH A 25 525 84 HOH HOH . 
F 6 HOH A 26 526 3 HOH HOH . 
F 6 HOH A 27 527 223 HOH HOH . 
F 6 HOH A 28 528 86 HOH HOH . 
F 6 HOH A 29 529 8 HOH HOH . 
F 6 HOH A 30 530 54 HOH HOH . 
F 6 HOH A 31 531 59 HOH HOH . 
F 6 HOH A 32 532 1 HOH HOH . 
F 6 HOH A 33 533 18 HOH HOH . 
F 6 HOH A 34 534 64 HOH HOH . 
F 6 HOH A 35 535 164 HOH HOH . 
F 6 HOH A 36 536 43 HOH HOH . 
F 6 HOH A 37 537 36 HOH HOH . 
F 6 HOH A 38 538 39 HOH HOH . 
F 6 HOH A 39 539 34 HOH HOH . 
F 6 HOH A 40 540 206 HOH HOH . 
F 6 HOH A 41 541 159 HOH HOH . 
F 6 HOH A 42 542 157 HOH HOH . 
F 6 HOH A 43 543 120 HOH HOH . 
F 6 HOH A 44 544 6 HOH HOH . 
F 6 HOH A 45 545 154 HOH HOH . 
F 6 HOH A 46 546 87 HOH HOH . 
F 6 HOH A 47 547 110 HOH HOH . 
F 6 HOH A 48 548 35 HOH HOH . 
F 6 HOH A 49 549 41 HOH HOH . 
F 6 HOH A 50 550 57 HOH HOH . 
F 6 HOH A 51 551 99 HOH HOH . 
F 6 HOH A 52 552 42 HOH HOH . 
F 6 HOH A 53 553 199 HOH HOH . 
F 6 HOH A 54 554 169 HOH HOH . 
F 6 HOH A 55 555 94 HOH HOH . 
F 6 HOH A 56 556 85 HOH HOH . 
F 6 HOH A 57 557 214 HOH HOH . 
F 6 HOH A 58 558 71 HOH HOH . 
F 6 HOH A 59 559 29 HOH HOH . 
F 6 HOH A 60 560 198 HOH HOH . 
F 6 HOH A 61 561 5 HOH HOH . 
F 6 HOH A 62 562 102 HOH HOH . 
F 6 HOH A 63 563 4 HOH HOH . 
F 6 HOH A 64 564 46 HOH HOH . 
F 6 HOH A 65 565 126 HOH HOH . 
F 6 HOH A 66 566 121 HOH HOH . 
F 6 HOH A 67 567 175 HOH HOH . 
F 6 HOH A 68 568 123 HOH HOH . 
F 6 HOH A 69 569 48 HOH HOH . 
F 6 HOH A 70 570 111 HOH HOH . 
F 6 HOH A 71 571 78 HOH HOH . 
F 6 HOH A 72 572 207 HOH HOH . 
F 6 HOH A 73 573 25 HOH HOH . 
F 6 HOH A 74 574 28 HOH HOH . 
F 6 HOH A 75 575 105 HOH HOH . 
F 6 HOH A 76 576 17 HOH HOH . 
F 6 HOH A 77 577 100 HOH HOH . 
F 6 HOH A 78 578 177 HOH HOH . 
F 6 HOH A 79 579 15 HOH HOH . 
F 6 HOH A 80 580 65 HOH HOH . 
F 6 HOH A 81 581 119 HOH HOH . 
F 6 HOH A 82 582 70 HOH HOH . 
F 6 HOH A 83 583 95 HOH HOH . 
F 6 HOH A 84 584 168 HOH HOH . 
F 6 HOH A 85 585 155 HOH HOH . 
F 6 HOH A 86 586 83 HOH HOH . 
F 6 HOH A 87 587 153 HOH HOH . 
F 6 HOH A 88 588 44 HOH HOH . 
F 6 HOH A 89 589 73 HOH HOH . 
F 6 HOH A 90 590 112 HOH HOH . 
F 6 HOH A 91 591 115 HOH HOH . 
F 6 HOH A 92 592 10 HOH HOH . 
F 6 HOH A 93 593 98 HOH HOH . 
F 6 HOH A 94 594 9 HOH HOH . 
F 6 HOH A 95 595 106 HOH HOH . 
F 6 HOH A 96 596 213 HOH HOH . 
F 6 HOH A 97 597 141 HOH HOH . 
F 6 HOH A 98 598 150 HOH HOH . 
F 6 HOH A 99 599 92 HOH HOH . 
F 6 HOH A 100 600 132 HOH HOH . 
F 6 HOH A 101 601 117 HOH HOH . 
F 6 HOH A 102 602 109 HOH HOH . 
F 6 HOH A 103 603 89 HOH HOH . 
F 6 HOH A 104 604 13 HOH HOH . 
F 6 HOH A 105 605 82 HOH HOH . 
F 6 HOH A 106 606 134 HOH HOH . 
F 6 HOH A 107 607 67 HOH HOH . 
F 6 HOH A 108 608 219 HOH HOH . 
F 6 HOH A 109 609 33 HOH HOH . 
F 6 HOH A 110 610 45 HOH HOH . 
F 6 HOH A 111 611 96 HOH HOH . 
F 6 HOH A 112 612 40 HOH HOH . 
F 6 HOH A 113 613 21 HOH HOH . 
F 6 HOH A 114 614 31 HOH HOH . 
F 6 HOH A 115 615 12 HOH HOH . 
F 6 HOH A 116 616 178 HOH HOH . 
F 6 HOH A 117 617 128 HOH HOH . 
F 6 HOH A 118 618 116 HOH HOH . 
F 6 HOH A 119 619 118 HOH HOH . 
F 6 HOH A 120 620 162 HOH HOH . 
F 6 HOH A 121 621 51 HOH HOH . 
F 6 HOH A 122 622 90 HOH HOH . 
F 6 HOH A 123 623 222 HOH HOH . 
F 6 HOH A 124 624 7 HOH HOH . 
F 6 HOH A 125 625 38 HOH HOH . 
F 6 HOH A 126 626 68 HOH HOH . 
F 6 HOH A 127 627 11 HOH HOH . 
F 6 HOH A 128 628 189 HOH HOH . 
F 6 HOH A 129 629 77 HOH HOH . 
F 6 HOH A 130 630 30 HOH HOH . 
F 6 HOH A 131 631 181 HOH HOH . 
F 6 HOH A 132 632 23 HOH HOH . 
F 6 HOH A 133 633 160 HOH HOH . 
F 6 HOH A 134 634 55 HOH HOH . 
F 6 HOH A 135 635 61 HOH HOH . 
F 6 HOH A 136 636 130 HOH HOH . 
F 6 HOH A 137 637 143 HOH HOH . 
F 6 HOH A 138 638 60 HOH HOH . 
F 6 HOH A 139 639 156 HOH HOH . 
F 6 HOH A 140 640 19 HOH HOH . 
F 6 HOH A 141 641 171 HOH HOH . 
F 6 HOH A 142 642 14 HOH HOH . 
F 6 HOH A 143 643 185 HOH HOH . 
F 6 HOH A 144 644 144 HOH HOH . 
F 6 HOH A 145 645 202 HOH HOH . 
F 6 HOH A 146 646 49 HOH HOH . 
F 6 HOH A 147 647 20 HOH HOH . 
F 6 HOH A 148 648 47 HOH HOH . 
F 6 HOH A 149 649 179 HOH HOH . 
F 6 HOH A 150 650 188 HOH HOH . 
F 6 HOH A 151 651 24 HOH HOH . 
F 6 HOH A 152 652 190 HOH HOH . 
F 6 HOH A 153 653 32 HOH HOH . 
F 6 HOH A 154 654 107 HOH HOH . 
F 6 HOH A 155 655 133 HOH HOH . 
F 6 HOH A 156 656 63 HOH HOH . 
F 6 HOH A 157 657 193 HOH HOH . 
F 6 HOH A 158 658 217 HOH HOH . 
F 6 HOH A 159 659 56 HOH HOH . 
F 6 HOH A 160 660 174 HOH HOH . 
F 6 HOH A 161 661 50 HOH HOH . 
F 6 HOH A 162 662 226 HOH HOH . 
F 6 HOH A 163 663 131 HOH HOH . 
F 6 HOH A 164 664 91 HOH HOH . 
F 6 HOH A 165 665 16 HOH HOH . 
F 6 HOH A 166 666 74 HOH HOH . 
F 6 HOH A 167 667 135 HOH HOH . 
F 6 HOH A 168 668 184 HOH HOH . 
F 6 HOH A 169 669 88 HOH HOH . 
F 6 HOH A 170 670 151 HOH HOH . 
F 6 HOH A 171 671 208 HOH HOH . 
F 6 HOH A 172 672 195 HOH HOH . 
F 6 HOH A 173 673 145 HOH HOH . 
F 6 HOH A 174 674 62 HOH HOH . 
F 6 HOH A 175 675 163 HOH HOH . 
F 6 HOH A 176 676 172 HOH HOH . 
F 6 HOH A 177 677 80 HOH HOH . 
F 6 HOH A 178 678 104 HOH HOH . 
F 6 HOH A 179 679 140 HOH HOH . 
F 6 HOH A 180 680 152 HOH HOH . 
F 6 HOH A 181 681 225 HOH HOH . 
F 6 HOH A 182 682 114 HOH HOH . 
F 6 HOH A 183 683 158 HOH HOH . 
F 6 HOH A 184 684 142 HOH HOH . 
F 6 HOH A 185 685 204 HOH HOH . 
F 6 HOH A 186 686 218 HOH HOH . 
F 6 HOH A 187 687 165 HOH HOH . 
F 6 HOH A 188 688 187 HOH HOH . 
F 6 HOH A 189 689 170 HOH HOH . 
F 6 HOH A 190 690 173 HOH HOH . 
F 6 HOH A 191 691 210 HOH HOH . 
F 6 HOH A 192 692 79 HOH HOH . 
F 6 HOH A 193 693 166 HOH HOH . 
F 6 HOH A 194 694 76 HOH HOH . 
F 6 HOH A 195 695 194 HOH HOH . 
F 6 HOH A 196 696 53 HOH HOH . 
F 6 HOH A 197 697 197 HOH HOH . 
F 6 HOH A 198 698 221 HOH HOH . 
F 6 HOH A 199 699 103 HOH HOH . 
F 6 HOH A 200 700 127 HOH HOH . 
F 6 HOH A 201 701 124 HOH HOH . 
F 6 HOH A 202 702 75 HOH HOH . 
F 6 HOH A 203 703 212 HOH HOH . 
F 6 HOH A 204 704 148 HOH HOH . 
F 6 HOH A 205 705 69 HOH HOH . 
F 6 HOH A 206 706 192 HOH HOH . 
F 6 HOH A 207 707 146 HOH HOH . 
F 6 HOH A 208 708 186 HOH HOH . 
F 6 HOH A 209 709 101 HOH HOH . 
F 6 HOH A 210 710 113 HOH HOH . 
F 6 HOH A 211 711 139 HOH HOH . 
F 6 HOH A 212 712 183 HOH HOH . 
F 6 HOH A 213 713 196 HOH HOH . 
F 6 HOH A 214 714 125 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N ARG . . . C 3 -10.883 5.376 16.538 1 35.19 ? N ARG 402 A 1 
HETATM 2 C CA ARG . . . C 3 -9.62 4.873 16.023 1 34.87 ? CA ARG 402 A 1 
HETATM 3 C C ARG . . . C 3 -9.439 5.302 14.571 1 34.98 ? C ARG 402 A 1 
HETATM 4 O O ARG . . . C 3 -10.348 5.904 13.978 1 35.45 ? O ARG 402 A 1 
HETATM 5 C CB ARG . . . C 3 -9.558 3.339 16.139 1 37.44 ? CB ARG 402 A 1 
HETATM 6 C CG ARG . . . C 3 -10.585 2.624 15.266 1 35.71 ? CG ARG 402 A 1 
HETATM 7 C CD ARG . . . C 3 -10.201 1.203 14.967 1 35.91 ? CD ARG 402 A 1 
HETATM 8 N NE ARG . . . C 3 -9.787 0.522 16.193 1 36.35 ? NE ARG 402 A 1 
HETATM 9 C CZ ARG . . . C 3 -10.627 0.073 17.129 1 36.31 ? CZ ARG 402 A 1 
HETATM 10 N NH1 ARG . . . C 3 -10.127 -0.503 18.22 1 39.52 ? NH1 ARG 402 A 1 
HETATM 11 N NH2 ARG . . . C 3 -11.95 0.247 17.024 1 35.87 ? NH2 ARG 402 A 1 
HETATM 12 O OXT ARG . . . C 3 -8.377 5.064 13.998 1 35.25 ? OXT ARG 402 A 1 
#
_model_server_stats.io_time_ms              32 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           12 
#