data_5J9P # _model_server_result.job_id vV4FKl5wdCeei_oNu1eMOQ _model_server_result.datetime_utc '2025-03-04 23:20:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j9p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":206}' # _entry.id 5J9P # _exptl.entry_id 5J9P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5J9P _cell.length_a 155.695 _cell.length_b 155.695 _cell.length_c 74.791 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J9P _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_595 -x,-y+4,z -1 0 0 0 -1 0 0 0 1 0 622.78 0 3 'crystal symmetry operation' 3_775 -y+2,x+2,z 0 -1 0 1 0 0 0 0 1 311.39 311.39 0 4 'crystal symmetry operation' 4_375 y-2,-x+2,z 0 1 0 -1 0 0 0 0 1 -311.39 311.39 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 145 A CYS 145 1_555 A SG CYS 200 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 B SG CYS 23 B CYS 23 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 B SG CYS 134 B CYS 134 1_555 B SG CYS 194 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 C O THR 54 C THR 75 1_555 G K K . C K 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? metalc ? metalc2 C O THR 54 C THR 75 1_555 G K K . C K 204 2_595 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? metalc ? metalc3 C O THR 54 C THR 75 1_555 H K K . C K 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.212 ? metalc ? metalc4 C OG1 THR 54 C THR 75 1_555 H K K . C K 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? metalc ? metalc5 C O THR 54 C THR 75 1_555 H K K . C K 205 2_595 ? ? ? ? ? ? ? ? ? ? ? ? 3.212 ? metalc ? metalc6 C OG1 THR 54 C THR 75 1_555 H K K . C K 205 2_595 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? metalc ? metalc7 C O VAL 55 C VAL 76 1_555 F K K . C K 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc8 C O VAL 55 C VAL 76 1_555 F K K . C K 203 2_595 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc9 C O VAL 55 C VAL 76 1_555 G K K . C K 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc10 C O VAL 55 C VAL 76 1_555 G K K . C K 204 2_595 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc11 C O GLY 56 C GLY 77 1_555 E K K . C K 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.389 ? metalc ? metalc12 C O GLY 56 C GLY 77 1_555 E K K . C K 202 2_595 ? ? ? ? ? ? ? ? ? ? ? ? 3.389 ? metalc ? metalc13 C O GLY 56 C GLY 77 1_555 F K K . C K 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? metalc ? metalc14 C O GLY 56 C GLY 77 1_555 F K K . C K 203 2_595 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? metalc ? metalc15 C O TYR 57 C TYR 78 1_555 E K K . C K 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc16 C O TYR 57 C TYR 78 1_555 E K K . C K 202 2_595 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5J9P _atom_sites.fract_transf_matrix[1][1] 0.006423 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006423 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013371 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 K C 1 201 1 K K . E 4 K C 1 202 2 K K . F 4 K C 1 203 3 K K . G 4 K C 1 204 4 K K . H 4 K C 1 205 5 K K . I 4 K C 1 206 6 K K . J 5 HOH A 1 301 16 HOH HOH . J 5 HOH A 2 302 42 HOH HOH . J 5 HOH A 3 303 2 HOH HOH . J 5 HOH A 4 304 3 HOH HOH . J 5 HOH A 5 305 12 HOH HOH . J 5 HOH A 6 306 15 HOH HOH . J 5 HOH A 7 307 20 HOH HOH . J 5 HOH A 8 308 10 HOH HOH . J 5 HOH A 9 309 19 HOH HOH . K 5 HOH B 1 301 18 HOH HOH . K 5 HOH B 2 302 37 HOH HOH . K 5 HOH B 3 303 22 HOH HOH . K 5 HOH B 4 304 23 HOH HOH . K 5 HOH B 5 305 33 HOH HOH . K 5 HOH B 6 306 21 HOH HOH . K 5 HOH B 7 307 38 HOH HOH . K 5 HOH B 8 308 25 HOH HOH . K 5 HOH B 9 309 26 HOH HOH . K 5 HOH B 10 310 7 HOH HOH . K 5 HOH B 11 311 36 HOH HOH . K 5 HOH B 12 312 32 HOH HOH . K 5 HOH B 13 313 28 HOH HOH . K 5 HOH B 14 314 5 HOH HOH . K 5 HOH B 15 315 34 HOH HOH . K 5 HOH B 16 316 30 HOH HOH . K 5 HOH B 17 317 35 HOH HOH . K 5 HOH B 18 318 24 HOH HOH . K 5 HOH B 19 319 9 HOH HOH . K 5 HOH B 20 320 29 HOH HOH . L 5 HOH C 1 301 41 HOH HOH . L 5 HOH C 2 302 31 HOH HOH . L 5 HOH C 3 303 45 HOH HOH . L 5 HOH C 4 304 39 HOH HOH . L 5 HOH C 5 305 40 HOH HOH . L 5 HOH C 6 306 44 HOH HOH . L 5 HOH C 7 307 43 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 4 _atom_site.Cartn_x 0 _atom_site.Cartn_y 311.39 _atom_site.Cartn_z 47.665 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 206 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 467 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #