data_5J9S # _model_server_result.job_id LNCAgqv1rif8D0LkjsuCzw _model_server_result.datetime_utc '2024-11-22 23:14:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5j9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":101}' # _entry.id 5J9S # _exptl.entry_id 5J9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5J9S _cell.length_a 104.979 _cell.length_b 104.979 _cell.length_c 45.128 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ARG 12 B ARG 26 1_555 B N ALY 13 B ALY 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale2 B C ALY 13 B ALY 27 1_555 B N SER 14 B SER 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 318 n n S O2 SO4 doub 319 n n S O3 SO4 sing 320 n n S O4 SO4 sing 321 n n # _atom_sites.entry_id 5J9S _atom_sites.fract_transf_matrix[1][1] 0.009526 _atom_sites.fract_transf_matrix[1][2] 0.0055 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010999 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022159 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 201 2 SO4 SO4 . D 3 SO4 A 1 202 4 SO4 SO4 . E 3 SO4 A 1 203 5 SO4 SO4 . F 3 SO4 B 1 101 1 SO4 SO4 . G 4 HOH A 1 301 47 HOH HOH . G 4 HOH A 2 302 20 HOH HOH . G 4 HOH A 3 303 46 HOH HOH . G 4 HOH A 4 304 50 HOH HOH . G 4 HOH A 5 305 16 HOH HOH . G 4 HOH A 6 306 10 HOH HOH . G 4 HOH A 7 307 30 HOH HOH . G 4 HOH A 8 308 15 HOH HOH . G 4 HOH A 9 309 49 HOH HOH . G 4 HOH A 10 310 42 HOH HOH . G 4 HOH A 11 311 22 HOH HOH . G 4 HOH A 12 312 5 HOH HOH . G 4 HOH A 13 313 21 HOH HOH . G 4 HOH A 14 314 31 HOH HOH . G 4 HOH A 15 315 6 HOH HOH . G 4 HOH A 16 316 13 HOH HOH . G 4 HOH A 17 317 28 HOH HOH . G 4 HOH A 18 318 8 HOH HOH . G 4 HOH A 19 319 2 HOH HOH . G 4 HOH A 20 320 40 HOH HOH . G 4 HOH A 21 321 25 HOH HOH . G 4 HOH A 22 322 1 HOH HOH . G 4 HOH A 23 323 24 HOH HOH . G 4 HOH A 24 324 12 HOH HOH . G 4 HOH A 25 325 17 HOH HOH . G 4 HOH A 26 326 34 HOH HOH . G 4 HOH A 27 327 4 HOH HOH . G 4 HOH A 28 328 18 HOH HOH . G 4 HOH A 29 329 19 HOH HOH . G 4 HOH A 30 330 7 HOH HOH . G 4 HOH A 31 331 41 HOH HOH . G 4 HOH A 32 332 26 HOH HOH . G 4 HOH A 33 333 27 HOH HOH . G 4 HOH A 34 334 9 HOH HOH . G 4 HOH A 35 335 33 HOH HOH . G 4 HOH A 36 336 14 HOH HOH . G 4 HOH A 37 337 36 HOH HOH . G 4 HOH A 38 338 23 HOH HOH . G 4 HOH A 39 339 43 HOH HOH . G 4 HOH A 40 340 3 HOH HOH . G 4 HOH A 41 341 29 HOH HOH . G 4 HOH A 42 342 11 HOH HOH . G 4 HOH A 43 343 45 HOH HOH . G 4 HOH A 44 344 39 HOH HOH . G 4 HOH A 45 345 44 HOH HOH . G 4 HOH A 46 346 51 HOH HOH . G 4 HOH A 47 347 38 HOH HOH . G 4 HOH A 48 348 37 HOH HOH . G 4 HOH A 49 349 48 HOH HOH . G 4 HOH A 50 350 35 HOH HOH . H 4 HOH B 1 201 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 3 38.003 -33.396 5.755 1 70.05 ? S SO4 101 B 1 HETATM 2 O O1 SO4 . . . F 3 39.048 -34.01 4.937 1 35.97 ? O1 SO4 101 B 1 HETATM 3 O O2 SO4 . . . F 3 37.909 -31.969 5.45 1 32.17 ? O2 SO4 101 B 1 HETATM 4 O O3 SO4 . . . F 3 36.723 -34.044 5.471 1 54.39 ? O3 SO4 101 B 1 HETATM 5 O O4 SO4 . . . F 3 38.338 -33.572 7.167 1 45.71 ? O4 SO4 101 B 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #