data_5JA2
#
_model_server_result.job_id            MnYNkBDqLjNh_bHg22G8BQ 
_model_server_result.datetime_utc      '2024-11-04 23:32:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ja2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1302}' 
#
_entry.id    5JA2 
#
_exptl.entry_id    5JA2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              90.121 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Meso-2,3-Butanediol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.62 
_cell.angle_gamma         90 
_cell.entry_id            5JA2 
_cell.length_a            159.27 
_cell.length_b            57.69 
_cell.length_c            182.424 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5JA2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            OG 
_struct_conn.ptnr1_label_comp_id            SER 
_struct_conn.ptnr1_label_seq_id             1008 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             SER 
_struct_conn.ptnr1_auth_seq_id              1006 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            C 
_struct_conn.ptnr2_label_atom_id            P1 
_struct_conn.ptnr2_label_comp_id            75C 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             75C 
_struct_conn.ptnr2_auth_seq_id              1301 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.615 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C4 H10 O2' 
_chem_comp.formula_weight    90.121 
_chem_comp.id                BU9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Meso-2,3-Butanediol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 C05 BU9 sing 166 n n 
C03 C04 BU9 sing 167 n n 
C04 C05 BU9 sing 168 n n 
C04 O06 BU9 sing 169 n n 
C05 O6 BU9 sing 170 n n 
C01 H011 BU9 sing 171 n n 
C01 H012 BU9 sing 172 n n 
C01 H013 BU9 sing 173 n n 
C05 H05 BU9 sing 174 n n 
C03 H031 BU9 sing 175 n n 
C03 H032 BU9 sing 176 n n 
C03 H033 BU9 sing 177 n n 
C04 H04 BU9 sing 178 n n 
O06 H06 BU9 sing 179 n n 
O6 H6 BU9 sing 180 n n 
#
_atom_sites.entry_id                     5JA2 
_atom_sites.fract_transf_matrix[1][1]    0.006279 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00084 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017334 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005531 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 75C A 1 1301 701 75C 4T8 . 
D 4 BU9 A 1 1302 1 BU9 BTD . 
E 4 BU9 A 1 1303 2 BU9 BTD . 
F 5 HOH A 1 1401 11 HOH HOH . 
F 5 HOH A 2 1402 15 HOH HOH . 
F 5 HOH A 3 1403 10 HOH HOH . 
F 5 HOH A 4 1404 4 HOH HOH . 
F 5 HOH A 5 1405 1 HOH HOH . 
F 5 HOH A 6 1406 3 HOH HOH . 
F 5 HOH A 7 1407 17 HOH HOH . 
F 5 HOH A 8 1408 18 HOH HOH . 
F 5 HOH A 9 1409 6 HOH HOH . 
F 5 HOH A 10 1410 7 HOH HOH . 
F 5 HOH A 11 1411 16 HOH HOH . 
F 5 HOH A 12 1412 9 HOH HOH . 
F 5 HOH A 13 1413 14 HOH HOH . 
F 5 HOH A 14 1414 13 HOH HOH . 
F 5 HOH A 15 1415 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C03 BU9 . . . D 4 -53.741 -39.066 -8.897 1 59.33 ? C03 BU9 1302 A 1 
HETATM 2 C C04 BU9 . . . D 4 -52.612 -39.048 -7.89 1 57.44 ? C04 BU9 1302 A 1 
HETATM 3 O O06 BU9 . . . D 4 -53.171 -39.163 -6.604 1 60.57 ? O06 BU9 1302 A 1 
HETATM 4 C C05 BU9 . . . D 4 -51.828 -37.758 -7.931 1 55.44 ? C05 BU9 1302 A 1 
HETATM 5 C C01 BU9 . . . D 4 -50.658 -37.749 -6.971 1 55.49 ? C01 BU9 1302 A 1 
HETATM 6 O O6 BU9 . . . D 4 -51.333 -37.602 -9.24 1 57.85 ? O6 BU9 1302 A 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#