data_5JA4 # _model_server_result.job_id LMaagT4ZsfSEbPFSFqIgyQ _model_server_result.datetime_utc '2025-03-26 19:45:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ja4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 5JA4 # _exptl.entry_id 5JA4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5JA4 _cell.length_a 139.506 _cell.length_b 139.506 _cell.length_c 72.896 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JA4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_647 y+1,x-1,-z+2 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 209.259 -120.81574 145.792 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 231 n n O1 C6 MES sing 232 n n C2 C3 MES sing 233 n n C2 H21 MES sing 234 n n C2 H22 MES sing 235 n n C3 N4 MES sing 236 n n C3 H31 MES sing 237 n n C3 H32 MES sing 238 n n N4 C5 MES sing 239 n n N4 C7 MES sing 240 n n N4 HN4 MES sing 241 n n C5 C6 MES sing 242 n n C5 H51 MES sing 243 n n C5 H52 MES sing 244 n n C6 H61 MES sing 245 n n C6 H62 MES sing 246 n n C7 C8 MES sing 247 n n C7 H71 MES sing 248 n n C7 H72 MES sing 249 n n C8 S MES sing 250 n n C8 H81 MES sing 251 n n C8 H82 MES sing 252 n n S O1S MES doub 253 n n S O2S MES doub 254 n n S O3S MES sing 255 n n # _atom_sites.entry_id 5JA4 _atom_sites.fract_transf_matrix[1][1] 0.007168 _atom_sites.fract_transf_matrix[1][2] 0.004139 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008277 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MES A 1 201 2 MES MES . F 6 GOL B 1 201 1 GOL GOL . G 6 GOL B 1 202 3 GOL GOL . H 7 HOH A 1 301 50 HOH HOH . H 7 HOH A 2 302 46 HOH HOH . H 7 HOH A 3 303 33 HOH HOH . H 7 HOH A 4 304 45 HOH HOH . H 7 HOH A 5 305 34 HOH HOH . H 7 HOH A 6 306 52 HOH HOH . H 7 HOH A 7 307 73 HOH HOH . H 7 HOH A 8 308 14 HOH HOH . H 7 HOH A 9 309 54 HOH HOH . H 7 HOH A 10 310 27 HOH HOH . H 7 HOH A 11 311 44 HOH HOH . H 7 HOH A 12 312 1 HOH HOH . H 7 HOH A 13 313 32 HOH HOH . H 7 HOH A 14 314 29 HOH HOH . H 7 HOH A 15 315 56 HOH HOH . H 7 HOH A 16 316 61 HOH HOH . H 7 HOH A 17 317 25 HOH HOH . H 7 HOH A 18 318 28 HOH HOH . H 7 HOH A 19 319 78 HOH HOH . H 7 HOH A 20 320 9 HOH HOH . H 7 HOH A 21 321 77 HOH HOH . H 7 HOH A 22 322 40 HOH HOH . H 7 HOH A 23 323 62 HOH HOH . H 7 HOH A 24 324 60 HOH HOH . H 7 HOH A 25 325 55 HOH HOH . H 7 HOH A 26 326 88 HOH HOH . H 7 HOH A 27 327 10 HOH HOH . H 7 HOH A 28 328 57 HOH HOH . H 7 HOH A 29 329 2 HOH HOH . H 7 HOH A 30 330 20 HOH HOH . H 7 HOH A 31 331 41 HOH HOH . H 7 HOH A 32 332 86 HOH HOH . H 7 HOH A 33 333 69 HOH HOH . H 7 HOH A 34 334 87 HOH HOH . I 7 HOH B 1 301 65 HOH HOH . I 7 HOH B 2 302 30 HOH HOH . I 7 HOH B 3 303 26 HOH HOH . I 7 HOH B 4 304 85 HOH HOH . I 7 HOH B 5 305 3 HOH HOH . I 7 HOH B 6 306 21 HOH HOH . I 7 HOH B 7 307 66 HOH HOH . I 7 HOH B 8 308 23 HOH HOH . I 7 HOH B 9 309 48 HOH HOH . I 7 HOH B 10 310 75 HOH HOH . I 7 HOH B 11 311 47 HOH HOH . I 7 HOH B 12 312 31 HOH HOH . I 7 HOH B 13 313 16 HOH HOH . I 7 HOH B 14 314 67 HOH HOH . I 7 HOH B 15 315 64 HOH HOH . I 7 HOH B 16 316 80 HOH HOH . I 7 HOH B 17 317 68 HOH HOH . I 7 HOH B 18 318 79 HOH HOH . I 7 HOH B 19 319 82 HOH HOH . I 7 HOH B 20 320 38 HOH HOH . I 7 HOH B 21 321 83 HOH HOH . I 7 HOH B 22 322 19 HOH HOH . J 7 HOH C 1 201 51 HOH HOH . J 7 HOH C 2 202 58 HOH HOH . J 7 HOH C 3 203 13 HOH HOH . J 7 HOH C 4 204 22 HOH HOH . J 7 HOH C 5 205 12 HOH HOH . J 7 HOH C 6 206 84 HOH HOH . J 7 HOH C 7 207 53 HOH HOH . J 7 HOH C 8 208 43 HOH HOH . J 7 HOH C 9 209 6 HOH HOH . J 7 HOH C 10 210 74 HOH HOH . J 7 HOH C 11 211 76 HOH HOH . J 7 HOH C 12 212 8 HOH HOH . J 7 HOH C 13 213 49 HOH HOH . J 7 HOH C 14 214 18 HOH HOH . J 7 HOH C 15 215 59 HOH HOH . J 7 HOH C 16 216 4 HOH HOH . J 7 HOH C 17 217 7 HOH HOH . J 7 HOH C 18 218 11 HOH HOH . J 7 HOH C 19 219 71 HOH HOH . J 7 HOH C 20 220 72 HOH HOH . J 7 HOH C 21 221 63 HOH HOH . J 7 HOH C 22 222 42 HOH HOH . J 7 HOH C 23 223 15 HOH HOH . K 7 HOH D 1 701 81 HOH HOH . K 7 HOH D 2 702 17 HOH HOH . K 7 HOH D 3 703 36 HOH HOH . K 7 HOH D 4 704 89 HOH HOH . K 7 HOH D 5 705 39 HOH HOH . K 7 HOH D 6 706 24 HOH HOH . K 7 HOH D 7 707 35 HOH HOH . K 7 HOH D 8 708 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . E 5 105.162 -47.884 77.3 1 85.25 ? O1 MES 201 A 1 HETATM 2 C C2 MES . . . E 5 104.742 -47.336 78.549 1 74.56 ? C2 MES 201 A 1 HETATM 3 C C3 MES . . . E 5 105.713 -46.251 79.03 1 71.94 ? C3 MES 201 A 1 HETATM 4 N N4 MES . . . E 5 107.058 -46.82 79.123 1 74.65 ? N4 MES 201 A 1 HETATM 5 C C5 MES . . . E 5 107.347 -48.106 78.504 1 80.07 ? C5 MES 201 A 1 HETATM 6 C C6 MES . . . E 5 106.573 -48.161 77.178 1 85.41 ? C6 MES 201 A 1 HETATM 7 C C7 MES . . . E 5 108.172 -45.995 79.598 1 74.03 ? C7 MES 201 A 1 HETATM 8 C C8 MES . . . E 5 108.353 -46.233 81.08 1 80.9 ? C8 MES 201 A 1 HETATM 9 S S MES . . . E 5 108.037 -44.824 81.876 1 166.53 ? S MES 201 A 1 HETATM 10 O O1S MES . . . E 5 109.215 -44.474 82.694 1 168.72 ? O1S MES 201 A 1 HETATM 11 O O2S MES . . . E 5 107.767 -43.748 80.904 1 168.18 ? O2S MES 201 A 1 HETATM 12 O O3S MES . . . E 5 106.864 -45.03 82.751 1 171.67 ? O3S MES 201 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #