data_5JA9 # _model_server_result.job_id d-B7h_y6WJfbPFTQcpPe4A _model_server_result.datetime_utc '2024-11-22 06:26:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ja9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 5JA9 # _exptl.entry_id 5JA9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.26 _cell.angle_gamma 90 _cell.entry_id 5JA9 _cell.length_a 45.76 _cell.length_b 60.4 _cell.length_c 88.59 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JA9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,J,K,M,O 1 1 B,D,H,I,L,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 22 A CYS 23 1_555 C SG CYS 96 A CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf2 D SG CYS 22 B CYS 23 1_555 D SG CYS 96 B CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 299 n n S O2 SO4 doub 300 n n S O3 SO4 sing 301 n n S O4 SO4 sing 302 n n # _atom_sites.entry_id 5JA9 _atom_sites.fract_transf_matrix[1][1] 0.021853 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005554 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016556 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011647 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 C 1 201 4 SO4 SO4 . F 3 SO4 C 1 202 5 SO4 SO4 . G 3 SO4 C 1 203 7 SO4 SO4 . H 3 SO4 D 1 201 3 SO4 SO4 . I 3 SO4 D 1 202 6 SO4 SO4 . J 3 SO4 A 1 201 1 SO4 SO4 . K 4 EDO A 1 202 1 EDO EDO . L 3 SO4 B 1 201 2 SO4 SO4 . M 5 HOH C 1 301 60 HOH HOH . M 5 HOH C 2 302 153 HOH HOH . M 5 HOH C 3 303 116 HOH HOH . M 5 HOH C 4 304 88 HOH HOH . M 5 HOH C 5 305 117 HOH HOH . M 5 HOH C 6 306 159 HOH HOH . M 5 HOH C 7 307 119 HOH HOH . M 5 HOH C 8 308 89 HOH HOH . M 5 HOH C 9 309 190 HOH HOH . M 5 HOH C 10 310 152 HOH HOH . M 5 HOH C 11 311 156 HOH HOH . M 5 HOH C 12 312 167 HOH HOH . M 5 HOH C 13 313 155 HOH HOH . N 5 HOH D 1 301 191 HOH HOH . N 5 HOH D 2 302 77 HOH HOH . N 5 HOH D 3 303 122 HOH HOH . N 5 HOH D 4 304 90 HOH HOH . N 5 HOH D 5 305 54 HOH HOH . N 5 HOH D 6 306 136 HOH HOH . N 5 HOH D 7 307 115 HOH HOH . N 5 HOH D 8 308 120 HOH HOH . N 5 HOH D 9 309 143 HOH HOH . N 5 HOH D 10 310 87 HOH HOH . N 5 HOH D 11 311 121 HOH HOH . N 5 HOH D 12 312 147 HOH HOH . N 5 HOH D 13 313 114 HOH HOH . N 5 HOH D 14 314 140 HOH HOH . O 5 HOH A 1 301 145 HOH HOH . O 5 HOH A 2 302 166 HOH HOH . O 5 HOH A 3 303 68 HOH HOH . O 5 HOH A 4 304 149 HOH HOH . O 5 HOH A 5 305 45 HOH HOH . O 5 HOH A 6 306 78 HOH HOH . O 5 HOH A 7 307 125 HOH HOH . O 5 HOH A 8 308 11 HOH HOH . O 5 HOH A 9 309 93 HOH HOH . O 5 HOH A 10 310 130 HOH HOH . O 5 HOH A 11 311 65 HOH HOH . O 5 HOH A 12 312 128 HOH HOH . O 5 HOH A 13 313 72 HOH HOH . O 5 HOH A 14 314 70 HOH HOH . O 5 HOH A 15 315 94 HOH HOH . O 5 HOH A 16 316 59 HOH HOH . O 5 HOH A 17 317 21 HOH HOH . O 5 HOH A 18 318 8 HOH HOH . O 5 HOH A 19 319 134 HOH HOH . O 5 HOH A 20 320 58 HOH HOH . O 5 HOH A 21 321 10 HOH HOH . O 5 HOH A 22 322 24 HOH HOH . O 5 HOH A 23 323 20 HOH HOH . O 5 HOH A 24 324 26 HOH HOH . O 5 HOH A 25 325 6 HOH HOH . O 5 HOH A 26 326 28 HOH HOH . O 5 HOH A 27 327 64 HOH HOH . O 5 HOH A 28 328 7 HOH HOH . O 5 HOH A 29 329 71 HOH HOH . O 5 HOH A 30 330 66 HOH HOH . O 5 HOH A 31 331 29 HOH HOH . O 5 HOH A 32 332 22 HOH HOH . O 5 HOH A 33 333 177 HOH HOH . O 5 HOH A 34 334 180 HOH HOH . O 5 HOH A 35 335 157 HOH HOH . O 5 HOH A 36 336 63 HOH HOH . O 5 HOH A 37 337 67 HOH HOH . O 5 HOH A 38 338 2 HOH HOH . O 5 HOH A 39 339 57 HOH HOH . O 5 HOH A 40 340 69 HOH HOH . O 5 HOH A 41 341 146 HOH HOH . O 5 HOH A 42 342 84 HOH HOH . O 5 HOH A 43 343 83 HOH HOH . O 5 HOH A 44 344 25 HOH HOH . O 5 HOH A 45 345 96 HOH HOH . O 5 HOH A 46 346 138 HOH HOH . O 5 HOH A 47 347 148 HOH HOH . O 5 HOH A 48 348 19 HOH HOH . O 5 HOH A 49 349 98 HOH HOH . O 5 HOH A 50 350 74 HOH HOH . O 5 HOH A 51 351 158 HOH HOH . O 5 HOH A 52 352 107 HOH HOH . O 5 HOH A 53 353 110 HOH HOH . O 5 HOH A 54 354 73 HOH HOH . O 5 HOH A 55 355 126 HOH HOH . O 5 HOH A 56 356 144 HOH HOH . O 5 HOH A 57 357 183 HOH HOH . O 5 HOH A 58 358 31 HOH HOH . O 5 HOH A 59 359 197 HOH HOH . O 5 HOH A 60 360 165 HOH HOH . P 5 HOH B 1 301 154 HOH HOH . P 5 HOH B 2 302 50 HOH HOH . P 5 HOH B 3 303 16 HOH HOH . P 5 HOH B 4 304 15 HOH HOH . P 5 HOH B 5 305 85 HOH HOH . P 5 HOH B 6 306 164 HOH HOH . P 5 HOH B 7 307 51 HOH HOH . P 5 HOH B 8 308 36 HOH HOH . P 5 HOH B 9 309 30 HOH HOH . P 5 HOH B 10 310 75 HOH HOH . P 5 HOH B 11 311 162 HOH HOH . P 5 HOH B 12 312 111 HOH HOH . P 5 HOH B 13 313 160 HOH HOH . P 5 HOH B 14 314 48 HOH HOH . P 5 HOH B 15 315 139 HOH HOH . P 5 HOH B 16 316 41 HOH HOH . P 5 HOH B 17 317 3 HOH HOH . P 5 HOH B 18 318 42 HOH HOH . P 5 HOH B 19 319 135 HOH HOH . P 5 HOH B 20 320 14 HOH HOH . P 5 HOH B 21 321 123 HOH HOH . P 5 HOH B 22 322 13 HOH HOH . P 5 HOH B 23 323 103 HOH HOH . P 5 HOH B 24 324 33 HOH HOH . P 5 HOH B 25 325 4 HOH HOH . P 5 HOH B 26 326 12 HOH HOH . P 5 HOH B 27 327 53 HOH HOH . P 5 HOH B 28 328 86 HOH HOH . P 5 HOH B 29 329 32 HOH HOH . P 5 HOH B 30 330 163 HOH HOH . P 5 HOH B 31 331 5 HOH HOH . P 5 HOH B 32 332 37 HOH HOH . P 5 HOH B 33 333 17 HOH HOH . P 5 HOH B 34 334 52 HOH HOH . P 5 HOH B 35 335 104 HOH HOH . P 5 HOH B 36 336 61 HOH HOH . P 5 HOH B 37 337 102 HOH HOH . P 5 HOH B 38 338 82 HOH HOH . P 5 HOH B 39 339 106 HOH HOH . P 5 HOH B 40 340 62 HOH HOH . P 5 HOH B 41 341 80 HOH HOH . P 5 HOH B 42 342 182 HOH HOH . P 5 HOH B 43 343 101 HOH HOH . P 5 HOH B 44 344 40 HOH HOH . P 5 HOH B 45 345 44 HOH HOH . P 5 HOH B 46 346 188 HOH HOH . P 5 HOH B 47 347 150 HOH HOH . P 5 HOH B 48 348 79 HOH HOH . P 5 HOH B 49 349 199 HOH HOH . P 5 HOH B 50 350 56 HOH HOH . P 5 HOH B 51 351 142 HOH HOH . P 5 HOH B 52 352 176 HOH HOH . P 5 HOH B 53 353 47 HOH HOH . P 5 HOH B 54 354 189 HOH HOH . P 5 HOH B 55 355 27 HOH HOH . P 5 HOH B 56 356 39 HOH HOH . P 5 HOH B 57 357 9 HOH HOH . P 5 HOH B 58 358 92 HOH HOH . P 5 HOH B 59 359 34 HOH HOH . P 5 HOH B 60 360 49 HOH HOH . P 5 HOH B 61 361 175 HOH HOH . P 5 HOH B 62 362 131 HOH HOH . P 5 HOH B 63 363 172 HOH HOH . P 5 HOH B 64 364 43 HOH HOH . P 5 HOH B 65 365 76 HOH HOH . P 5 HOH B 66 366 109 HOH HOH . P 5 HOH B 67 367 185 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 3 -8.304 47.05 -29.122 1 153.02 ? S SO4 202 C 1 HETATM 2 O O1 SO4 . . . F 3 -7.247 48.052 -29.226 1 150.95 ? O1 SO4 202 C 1 HETATM 3 O O2 SO4 . . . F 3 -8.814 46.74 -30.454 1 153.05 ? O2 SO4 202 C 1 HETATM 4 O O3 SO4 . . . F 3 -7.765 45.835 -28.518 1 154.85 ? O3 SO4 202 C 1 HETATM 5 O O4 SO4 . . . F 3 -9.391 47.56 -28.288 1 152.06 ? O4 SO4 202 C 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 5 #