data_5JBC # _model_server_result.job_id DGQinZaq8sYOxvjSsa0TnQ _model_server_result.datetime_utc '2024-11-20 03:30:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jbc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5JBC # _exptl.entry_id 5JBC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JBC _cell.length_a 44.34 _cell.length_b 65.8 _cell.length_c 97.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JBC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 1 E CYS 88 1_555 A SG CYS 12 E CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 8 E CYS 95 1_555 A SG CYS 22 E CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 24 E CYS 111 1_555 A SG CYS 37 E CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 A SG CYS 45 E CYS 132 1_555 B SG CYS 109 S CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 B SG CYS 26 S CYS 42 1_555 B SG CYS 42 S CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf6 B SG CYS 156 S CYS 168 1_555 B SG CYS 170 S CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf7 B SG CYS 181 S CYS 191 1_555 B SG CYS 209 S CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 B NE2 HIS 41 S HIS 57 1_555 D C3 0G6 . S 0G6 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale2 B OG SER 185 S SER 195 1_555 D C2 0G6 . S 0G6 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.368 ? metalc ? metalc1 B OE1 GLU 55 S GLU 70 1_555 C CA CA . S CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc2 B O ASN 57 S ASN 72 1_555 C CA CA . S CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc3 B O GLU 60 S GLU 75 1_555 C CA CA . S CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc4 B OE1 GLU 62 S GLU 77 1_555 C CA CA . S CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc5 B OE2 GLU 62 S GLU 77 1_555 C CA CA . S CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc6 B OE2 GLU 65 S GLU 80 1_555 C CA CA . S CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc7 C CA CA . S CA 301 1_555 F O HOH . S HOH 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5JBC _atom_sites.fract_transf_matrix[1][1] 0.022553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015198 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA S 1 301 246 CA CA . D 4 0G6 S 1 302 1 0G6 0G6 . E 5 HOH E 1 201 1147 HOH HOH . E 5 HOH E 2 202 1053 HOH HOH . E 5 HOH E 3 203 1028 HOH HOH . E 5 HOH E 4 204 1011 HOH HOH . E 5 HOH E 5 205 1041 HOH HOH . E 5 HOH E 6 206 1066 HOH HOH . E 5 HOH E 7 207 1149 HOH HOH . E 5 HOH E 8 208 1134 HOH HOH . E 5 HOH E 9 209 1017 HOH HOH . E 5 HOH E 10 210 1038 HOH HOH . E 5 HOH E 11 211 1132 HOH HOH . E 5 HOH E 12 212 1094 HOH HOH . F 5 HOH S 1 401 1168 HOH HOH . F 5 HOH S 2 402 1136 HOH HOH . F 5 HOH S 3 403 1166 HOH HOH . F 5 HOH S 4 404 1051 HOH HOH . F 5 HOH S 5 405 1154 HOH HOH . F 5 HOH S 6 406 1007 HOH HOH . F 5 HOH S 7 407 1124 HOH HOH . F 5 HOH S 8 408 1097 HOH HOH . F 5 HOH S 9 409 1012 HOH HOH . F 5 HOH S 10 410 1039 HOH HOH . F 5 HOH S 11 411 1092 HOH HOH . F 5 HOH S 12 412 1118 HOH HOH . F 5 HOH S 13 413 1006 HOH HOH . F 5 HOH S 14 414 1045 HOH HOH . F 5 HOH S 15 415 1015 HOH HOH . F 5 HOH S 16 416 1061 HOH HOH . F 5 HOH S 17 417 1135 HOH HOH . F 5 HOH S 18 418 1103 HOH HOH . F 5 HOH S 19 419 1067 HOH HOH . F 5 HOH S 20 420 1123 HOH HOH . F 5 HOH S 21 421 1014 HOH HOH . F 5 HOH S 22 422 1027 HOH HOH . F 5 HOH S 23 423 1120 HOH HOH . F 5 HOH S 24 424 1143 HOH HOH . F 5 HOH S 25 425 1052 HOH HOH . F 5 HOH S 26 426 1047 HOH HOH . F 5 HOH S 27 427 1023 HOH HOH . F 5 HOH S 28 428 1077 HOH HOH . F 5 HOH S 29 429 1013 HOH HOH . F 5 HOH S 30 430 1125 HOH HOH . F 5 HOH S 31 431 1116 HOH HOH . F 5 HOH S 32 432 1044 HOH HOH . F 5 HOH S 33 433 1035 HOH HOH . F 5 HOH S 34 434 1057 HOH HOH . F 5 HOH S 35 435 1138 HOH HOH . F 5 HOH S 36 436 1160 HOH HOH . F 5 HOH S 37 437 1105 HOH HOH . F 5 HOH S 38 438 1099 HOH HOH . F 5 HOH S 39 439 1096 HOH HOH . F 5 HOH S 40 440 1141 HOH HOH . F 5 HOH S 41 441 1055 HOH HOH . F 5 HOH S 42 442 1146 HOH HOH . F 5 HOH S 43 443 1133 HOH HOH . F 5 HOH S 44 444 1048 HOH HOH . F 5 HOH S 45 445 1150 HOH HOH . F 5 HOH S 46 446 1022 HOH HOH . F 5 HOH S 47 447 1001 HOH HOH . F 5 HOH S 48 448 1064 HOH HOH . F 5 HOH S 49 449 1036 HOH HOH . F 5 HOH S 50 450 1151 HOH HOH . F 5 HOH S 51 451 1163 HOH HOH . F 5 HOH S 52 452 1059 HOH HOH . F 5 HOH S 53 453 1075 HOH HOH . F 5 HOH S 54 454 1110 HOH HOH . F 5 HOH S 55 455 1040 HOH HOH . F 5 HOH S 56 456 1008 HOH HOH . F 5 HOH S 57 457 1049 HOH HOH . F 5 HOH S 58 458 1112 HOH HOH . F 5 HOH S 59 459 1144 HOH HOH . F 5 HOH S 60 460 1129 HOH HOH . F 5 HOH S 61 461 1087 HOH HOH . F 5 HOH S 62 462 1034 HOH HOH . F 5 HOH S 63 463 1030 HOH HOH . F 5 HOH S 64 464 1117 HOH HOH . F 5 HOH S 65 465 1068 HOH HOH . F 5 HOH S 66 466 1003 HOH HOH . F 5 HOH S 67 467 1106 HOH HOH . F 5 HOH S 68 468 1029 HOH HOH . F 5 HOH S 69 469 1102 HOH HOH . F 5 HOH S 70 470 1156 HOH HOH . F 5 HOH S 71 471 1081 HOH HOH . F 5 HOH S 72 472 1004 HOH HOH . F 5 HOH S 73 473 1024 HOH HOH . F 5 HOH S 74 474 1174 HOH HOH . F 5 HOH S 75 475 1072 HOH HOH . F 5 HOH S 76 476 1131 HOH HOH . F 5 HOH S 77 477 1031 HOH HOH . F 5 HOH S 78 478 1088 HOH HOH . F 5 HOH S 79 479 1042 HOH HOH . F 5 HOH S 80 480 1046 HOH HOH . F 5 HOH S 81 481 1073 HOH HOH . F 5 HOH S 82 482 1019 HOH HOH . F 5 HOH S 83 483 1037 HOH HOH . F 5 HOH S 84 484 1074 HOH HOH . F 5 HOH S 85 485 1090 HOH HOH . F 5 HOH S 86 486 1020 HOH HOH . F 5 HOH S 87 487 1080 HOH HOH . F 5 HOH S 88 488 1062 HOH HOH . F 5 HOH S 89 489 1009 HOH HOH . F 5 HOH S 90 490 1172 HOH HOH . F 5 HOH S 91 491 1065 HOH HOH . F 5 HOH S 92 492 1005 HOH HOH . F 5 HOH S 93 493 1058 HOH HOH . F 5 HOH S 94 494 1021 HOH HOH . F 5 HOH S 95 495 1026 HOH HOH . F 5 HOH S 96 496 1043 HOH HOH . F 5 HOH S 97 497 1084 HOH HOH . F 5 HOH S 98 498 1032 HOH HOH . F 5 HOH S 99 499 1018 HOH HOH . F 5 HOH S 100 500 1121 HOH HOH . F 5 HOH S 101 501 1155 HOH HOH . F 5 HOH S 102 502 1050 HOH HOH . F 5 HOH S 103 503 1033 HOH HOH . F 5 HOH S 104 504 1056 HOH HOH . F 5 HOH S 105 505 1060 HOH HOH . F 5 HOH S 106 506 1054 HOH HOH . F 5 HOH S 107 507 1086 HOH HOH . F 5 HOH S 108 508 1161 HOH HOH . F 5 HOH S 109 509 1069 HOH HOH . F 5 HOH S 110 510 1098 HOH HOH . F 5 HOH S 111 511 1104 HOH HOH . F 5 HOH S 112 512 1002 HOH HOH . F 5 HOH S 113 513 1101 HOH HOH . F 5 HOH S 114 514 1127 HOH HOH . F 5 HOH S 115 515 1070 HOH HOH . F 5 HOH S 116 516 1122 HOH HOH . F 5 HOH S 117 517 1157 HOH HOH . F 5 HOH S 118 518 1167 HOH HOH . F 5 HOH S 119 519 1063 HOH HOH . F 5 HOH S 120 520 1095 HOH HOH . F 5 HOH S 121 521 1100 HOH HOH . F 5 HOH S 122 522 1091 HOH HOH . F 5 HOH S 123 523 1025 HOH HOH . F 5 HOH S 124 524 1159 HOH HOH . F 5 HOH S 125 525 1158 HOH HOH . F 5 HOH S 126 526 1128 HOH HOH . F 5 HOH S 127 527 1137 HOH HOH . F 5 HOH S 128 528 1010 HOH HOH . F 5 HOH S 129 529 1173 HOH HOH . F 5 HOH S 130 530 1175 HOH HOH . F 5 HOH S 131 531 1076 HOH HOH . F 5 HOH S 132 532 1082 HOH HOH . F 5 HOH S 133 533 1085 HOH HOH . F 5 HOH S 134 534 1169 HOH HOH . F 5 HOH S 135 535 1140 HOH HOH . F 5 HOH S 136 536 1016 HOH HOH . F 5 HOH S 137 537 1108 HOH HOH . F 5 HOH S 138 538 1093 HOH HOH . F 5 HOH S 139 539 1111 HOH HOH . F 5 HOH S 140 540 1162 HOH HOH . F 5 HOH S 141 541 1113 HOH HOH . F 5 HOH S 142 542 1153 HOH HOH . F 5 HOH S 143 543 1148 HOH HOH . F 5 HOH S 144 544 1170 HOH HOH . F 5 HOH S 145 545 1142 HOH HOH . F 5 HOH S 146 546 1115 HOH HOH . F 5 HOH S 147 547 1071 HOH HOH . F 5 HOH S 148 548 1164 HOH HOH . F 5 HOH S 149 549 1107 HOH HOH . F 5 HOH S 150 550 1083 HOH HOH . F 5 HOH S 151 551 1114 HOH HOH . F 5 HOH S 152 552 1079 HOH HOH . F 5 HOH S 153 553 1109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -27.041 _atom_site.Cartn_y -11.559 _atom_site.Cartn_z 13.233 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id S _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #