data_5JBQ # _model_server_result.job_id '_rpQ94qanPCHzeiGi9E4iw' _model_server_result.datetime_utc '2024-12-21 13:01:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jbq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5JBQ # _exptl.entry_id 5JBQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JBQ _cell.length_a 80.35 _cell.length_b 125.34 _cell.length_c 45.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JBQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C SER 1 B SER 1 1_555 B SG BB9 2 B BB9 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.754 ? covale ? covale2 B C SER 1 B SER 1 1_555 B N BB9 2 B BB9 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale3 B CA SER 1 B SER 1 1_555 B C BB9 10 B BB9 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? covale ? covale4 B CB SER 1 B SER 1 1_555 B CB MH6 11 B MH6 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.399 ? covale ? covale5 B C BB9 2 B BB9 2 1_555 B N ASN 3 B ASN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 B C ASN 3 B ASN 3 1_555 B SG BB6 4 B BB6 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.74 ? covale ? covale7 B C ASN 3 B ASN 3 1_555 B N BB6 4 B BB6 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 B C BB6 4 B BB6 4 1_555 B N H14 5 B H14 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale9 B C H14 5 B H14 5 1_555 B SG BB9 6 B BB9 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.753 ? covale ? covale10 B C H14 5 B H14 5 1_555 B N BB9 6 B BB9 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale11 B C BB9 6 B BB9 6 1_555 B N TYR 7 B TYR 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 B C TYR 7 B TYR 7 1_555 B N 05N 8 B 05N 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? covale ? covale13 B C 05N 8 B 05N 8 1_555 B N BB9 9 B BB9 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale14 B C 05N 8 B 05N 8 1_555 B SG BB9 9 B BB9 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.756 ? covale ? covale15 B C BB9 9 B BB9 9 1_555 B SG BB9 10 B BB9 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.742 ? covale ? covale16 B C BB9 9 B BB9 9 1_555 B N BB9 10 B BB9 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale17 B C BB9 10 B BB9 10 1_555 B N MH6 11 B MH6 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale18 B C MH6 11 B MH6 11 1_555 B N BB9 12 B BB9 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale19 B C MH6 11 B MH6 11 1_555 B SG BB9 12 B BB9 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.761 ? covale ? covale20 B C BB9 12 B BB9 12 1_555 B N 6RK 13 B 6RK 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? metalc ? metalc1 A OG1 THR 26 A THR 25 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc2 C O2B GDP . A GDP 401 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc3 D MG MG . A MG 402 1_555 G O HOH . A HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc4 D MG MG . A MG 402 1_555 G O HOH . A HOH 510 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc5 D MG MG . A MG 402 1_555 G O HOH . A HOH 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc6 D MG MG . A MG 402 1_555 G O HOH . A HOH 554 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc7 D MG MG . A MG 402 1_555 G O HOH . A HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc8 D MG MG . A MG 402 1_555 G O HOH . A HOH 636 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 152 n n PB O2B GDP sing 153 n n PB O3B GDP sing 154 n n PB O3A GDP sing 155 n n O2B HOB2 GDP sing 156 n n O3B HOB3 GDP sing 157 n n O3A PA GDP sing 158 n n PA O1A GDP doub 159 n n PA O2A GDP sing 160 n n PA O5' GDP sing 161 n n O2A HOA2 GDP sing 162 n n O5' C5' GDP sing 163 n n C5' C4' GDP sing 164 n n C5' H5' GDP sing 165 n n C5' "H5''" GDP sing 166 n n C4' O4' GDP sing 167 n n C4' C3' GDP sing 168 n n C4' H4' GDP sing 169 n n O4' C1' GDP sing 170 n n C3' O3' GDP sing 171 n n C3' C2' GDP sing 172 n n C3' H3' GDP sing 173 n n O3' HO3' GDP sing 174 n n C2' O2' GDP sing 175 n n C2' C1' GDP sing 176 n n C2' H2' GDP sing 177 n n O2' HO2' GDP sing 178 n n C1' N9 GDP sing 179 n n C1' H1' GDP sing 180 n n N9 C8 GDP sing 181 n y N9 C4 GDP sing 182 n y C8 N7 GDP doub 183 n y C8 H8 GDP sing 184 n n N7 C5 GDP sing 185 n y C5 C6 GDP sing 186 n n C5 C4 GDP doub 187 n y C6 O6 GDP doub 188 n n C6 N1 GDP sing 189 n n N1 C2 GDP sing 190 n n N1 HN1 GDP sing 191 n n C2 N2 GDP sing 192 n n C2 N3 GDP doub 193 n n N2 HN21 GDP sing 194 n n N2 HN22 GDP sing 195 n n N3 C4 GDP sing 196 n n # _atom_sites.entry_id 5JBQ _atom_sites.fract_transf_matrix[1][1] 0.012446 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022026 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GDP A 1 401 999 GDP GDP . D 4 MG A 1 402 1 MG MG . E 4 MG A 1 403 2 MG MG . F 5 SO4 A 1 404 1 SO4 SO4 . G 6 HOH A 1 501 6 HOH HOH . G 6 HOH A 2 502 104 HOH HOH . G 6 HOH A 3 503 14 HOH HOH . G 6 HOH A 4 504 56 HOH HOH . G 6 HOH A 5 505 220 HOH HOH . G 6 HOH A 6 506 82 HOH HOH . G 6 HOH A 7 507 216 HOH HOH . G 6 HOH A 8 508 46 HOH HOH . G 6 HOH A 9 509 39 HOH HOH . G 6 HOH A 10 510 224 HOH HOH . G 6 HOH A 11 511 100 HOH HOH . G 6 HOH A 12 512 180 HOH HOH . G 6 HOH A 13 513 83 HOH HOH . G 6 HOH A 14 514 15 HOH HOH . G 6 HOH A 15 515 163 HOH HOH . G 6 HOH A 16 516 2 HOH HOH . G 6 HOH A 17 517 73 HOH HOH . G 6 HOH A 18 518 24 HOH HOH . G 6 HOH A 19 519 99 HOH HOH . G 6 HOH A 20 520 81 HOH HOH . G 6 HOH A 21 521 80 HOH HOH . G 6 HOH A 22 522 156 HOH HOH . G 6 HOH A 23 523 45 HOH HOH . G 6 HOH A 24 524 173 HOH HOH . G 6 HOH A 25 525 44 HOH HOH . G 6 HOH A 26 526 215 HOH HOH . G 6 HOH A 27 527 10 HOH HOH . G 6 HOH A 28 528 69 HOH HOH . G 6 HOH A 29 529 22 HOH HOH . G 6 HOH A 30 530 151 HOH HOH . G 6 HOH A 31 531 60 HOH HOH . G 6 HOH A 32 532 218 HOH HOH . G 6 HOH A 33 533 95 HOH HOH . G 6 HOH A 34 534 25 HOH HOH . G 6 HOH A 35 535 31 HOH HOH . G 6 HOH A 36 536 161 HOH HOH . G 6 HOH A 37 537 3 HOH HOH . G 6 HOH A 38 538 210 HOH HOH . G 6 HOH A 39 539 57 HOH HOH . G 6 HOH A 40 540 12 HOH HOH . G 6 HOH A 41 541 88 HOH HOH . G 6 HOH A 42 542 127 HOH HOH . G 6 HOH A 43 543 63 HOH HOH . G 6 HOH A 44 544 164 HOH HOH . G 6 HOH A 45 545 212 HOH HOH . G 6 HOH A 46 546 195 HOH HOH . G 6 HOH A 47 547 194 HOH HOH . G 6 HOH A 48 548 169 HOH HOH . G 6 HOH A 49 549 42 HOH HOH . G 6 HOH A 50 550 122 HOH HOH . G 6 HOH A 51 551 191 HOH HOH . G 6 HOH A 52 552 153 HOH HOH . G 6 HOH A 53 553 131 HOH HOH . G 6 HOH A 54 554 223 HOH HOH . G 6 HOH A 55 555 62 HOH HOH . G 6 HOH A 56 556 217 HOH HOH . G 6 HOH A 57 557 179 HOH HOH . G 6 HOH A 58 558 19 HOH HOH . G 6 HOH A 59 559 139 HOH HOH . G 6 HOH A 60 560 55 HOH HOH . G 6 HOH A 61 561 51 HOH HOH . G 6 HOH A 62 562 38 HOH HOH . G 6 HOH A 63 563 188 HOH HOH . G 6 HOH A 64 564 102 HOH HOH . G 6 HOH A 65 565 124 HOH HOH . G 6 HOH A 66 566 208 HOH HOH . G 6 HOH A 67 567 54 HOH HOH . G 6 HOH A 68 568 147 HOH HOH . G 6 HOH A 69 569 11 HOH HOH . G 6 HOH A 70 570 86 HOH HOH . G 6 HOH A 71 571 30 HOH HOH . G 6 HOH A 72 572 34 HOH HOH . G 6 HOH A 73 573 125 HOH HOH . G 6 HOH A 74 574 52 HOH HOH . G 6 HOH A 75 575 149 HOH HOH . G 6 HOH A 76 576 120 HOH HOH . G 6 HOH A 77 577 109 HOH HOH . G 6 HOH A 78 578 119 HOH HOH . G 6 HOH A 79 579 146 HOH HOH . G 6 HOH A 80 580 78 HOH HOH . G 6 HOH A 81 581 205 HOH HOH . G 6 HOH A 82 582 221 HOH HOH . G 6 HOH A 83 583 199 HOH HOH . G 6 HOH A 84 584 85 HOH HOH . G 6 HOH A 85 585 37 HOH HOH . G 6 HOH A 86 586 96 HOH HOH . G 6 HOH A 87 587 167 HOH HOH . G 6 HOH A 88 588 189 HOH HOH . G 6 HOH A 89 589 101 HOH HOH . G 6 HOH A 90 590 171 HOH HOH . G 6 HOH A 91 591 23 HOH HOH . G 6 HOH A 92 592 121 HOH HOH . G 6 HOH A 93 593 89 HOH HOH . G 6 HOH A 94 594 7 HOH HOH . G 6 HOH A 95 595 133 HOH HOH . G 6 HOH A 96 596 1 HOH HOH . G 6 HOH A 97 597 113 HOH HOH . G 6 HOH A 98 598 168 HOH HOH . G 6 HOH A 99 599 138 HOH HOH . G 6 HOH A 100 600 77 HOH HOH . G 6 HOH A 101 601 4 HOH HOH . G 6 HOH A 102 602 150 HOH HOH . G 6 HOH A 103 603 117 HOH HOH . G 6 HOH A 104 604 26 HOH HOH . G 6 HOH A 105 605 8 HOH HOH . G 6 HOH A 106 606 219 HOH HOH . G 6 HOH A 107 607 174 HOH HOH . G 6 HOH A 108 608 135 HOH HOH . G 6 HOH A 109 609 70 HOH HOH . G 6 HOH A 110 610 27 HOH HOH . G 6 HOH A 111 611 74 HOH HOH . G 6 HOH A 112 612 157 HOH HOH . G 6 HOH A 113 613 64 HOH HOH . G 6 HOH A 114 614 40 HOH HOH . G 6 HOH A 115 615 29 HOH HOH . G 6 HOH A 116 616 160 HOH HOH . G 6 HOH A 117 617 87 HOH HOH . G 6 HOH A 118 618 92 HOH HOH . G 6 HOH A 119 619 48 HOH HOH . G 6 HOH A 120 620 152 HOH HOH . G 6 HOH A 121 621 137 HOH HOH . G 6 HOH A 122 622 190 HOH HOH . G 6 HOH A 123 623 5 HOH HOH . G 6 HOH A 124 624 76 HOH HOH . G 6 HOH A 125 625 18 HOH HOH . G 6 HOH A 126 626 142 HOH HOH . G 6 HOH A 127 627 21 HOH HOH . G 6 HOH A 128 628 178 HOH HOH . G 6 HOH A 129 629 196 HOH HOH . G 6 HOH A 130 630 148 HOH HOH . G 6 HOH A 131 631 13 HOH HOH . G 6 HOH A 132 632 176 HOH HOH . G 6 HOH A 133 633 181 HOH HOH . G 6 HOH A 134 634 16 HOH HOH . G 6 HOH A 135 635 128 HOH HOH . G 6 HOH A 136 636 222 HOH HOH . G 6 HOH A 137 637 59 HOH HOH . G 6 HOH A 138 638 20 HOH HOH . G 6 HOH A 139 639 145 HOH HOH . G 6 HOH A 140 640 165 HOH HOH . G 6 HOH A 141 641 28 HOH HOH . G 6 HOH A 142 642 112 HOH HOH . G 6 HOH A 143 643 98 HOH HOH . G 6 HOH A 144 644 9 HOH HOH . G 6 HOH A 145 645 134 HOH HOH . G 6 HOH A 146 646 202 HOH HOH . G 6 HOH A 147 647 33 HOH HOH . G 6 HOH A 148 648 155 HOH HOH . G 6 HOH A 149 649 143 HOH HOH . G 6 HOH A 150 650 17 HOH HOH . G 6 HOH A 151 651 172 HOH HOH . G 6 HOH A 152 652 65 HOH HOH . G 6 HOH A 153 653 170 HOH HOH . G 6 HOH A 154 654 116 HOH HOH . G 6 HOH A 155 655 61 HOH HOH . G 6 HOH A 156 656 103 HOH HOH . G 6 HOH A 157 657 204 HOH HOH . G 6 HOH A 158 658 129 HOH HOH . G 6 HOH A 159 659 66 HOH HOH . G 6 HOH A 160 660 200 HOH HOH . G 6 HOH A 161 661 185 HOH HOH . G 6 HOH A 162 662 175 HOH HOH . G 6 HOH A 163 663 47 HOH HOH . G 6 HOH A 164 664 193 HOH HOH . G 6 HOH A 165 665 183 HOH HOH . G 6 HOH A 166 666 67 HOH HOH . G 6 HOH A 167 667 140 HOH HOH . G 6 HOH A 168 668 106 HOH HOH . G 6 HOH A 169 669 184 HOH HOH . G 6 HOH A 170 670 71 HOH HOH . G 6 HOH A 171 671 58 HOH HOH . G 6 HOH A 172 672 32 HOH HOH . G 6 HOH A 173 673 91 HOH HOH . G 6 HOH A 174 674 79 HOH HOH . G 6 HOH A 175 675 50 HOH HOH . G 6 HOH A 176 676 144 HOH HOH . G 6 HOH A 177 677 159 HOH HOH . G 6 HOH A 178 678 198 HOH HOH . G 6 HOH A 179 679 182 HOH HOH . G 6 HOH A 180 680 126 HOH HOH . G 6 HOH A 181 681 166 HOH HOH . G 6 HOH A 182 682 209 HOH HOH . G 6 HOH A 183 683 41 HOH HOH . G 6 HOH A 184 684 68 HOH HOH . G 6 HOH A 185 685 211 HOH HOH . G 6 HOH A 186 686 136 HOH HOH . G 6 HOH A 187 687 107 HOH HOH . G 6 HOH A 188 688 84 HOH HOH . G 6 HOH A 189 689 186 HOH HOH . G 6 HOH A 190 690 192 HOH HOH . G 6 HOH A 191 691 201 HOH HOH . G 6 HOH A 192 692 187 HOH HOH . G 6 HOH A 193 693 123 HOH HOH . G 6 HOH A 194 694 36 HOH HOH . G 6 HOH A 195 695 72 HOH HOH . G 6 HOH A 196 696 49 HOH HOH . G 6 HOH A 197 697 111 HOH HOH . G 6 HOH A 198 698 115 HOH HOH . G 6 HOH A 199 699 203 HOH HOH . G 6 HOH A 200 700 158 HOH HOH . G 6 HOH A 201 701 197 HOH HOH . G 6 HOH A 202 702 154 HOH HOH . G 6 HOH A 203 703 105 HOH HOH . G 6 HOH A 204 704 35 HOH HOH . G 6 HOH A 205 705 53 HOH HOH . G 6 HOH A 206 706 132 HOH HOH . G 6 HOH A 207 707 162 HOH HOH . G 6 HOH A 208 708 108 HOH HOH . G 6 HOH A 209 709 90 HOH HOH . G 6 HOH A 210 710 94 HOH HOH . G 6 HOH A 211 711 43 HOH HOH . G 6 HOH A 212 712 114 HOH HOH . G 6 HOH A 213 713 141 HOH HOH . G 6 HOH A 214 714 118 HOH HOH . G 6 HOH A 215 715 97 HOH HOH . G 6 HOH A 216 716 110 HOH HOH . G 6 HOH A 217 717 130 HOH HOH . H 6 HOH B 1 101 214 HOH HOH . H 6 HOH B 2 102 93 HOH HOH . H 6 HOH B 3 103 177 HOH HOH . H 6 HOH B 4 104 206 HOH HOH . H 6 HOH B 5 105 213 HOH HOH . H 6 HOH B 6 106 75 HOH HOH . H 6 HOH B 7 107 207 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . C 3 -16.353 2.864 -19.923 1 19.92 ? PB GDP 401 A 1 HETATM 2 O O1B GDP . . . C 3 -15.832 4.152 -20.332 1 18.02 ? O1B GDP 401 A 1 HETATM 3 O O2B GDP . . . C 3 -17.857 2.768 -19.827 1 18.46 ? O2B GDP 401 A 1 HETATM 4 O O3B GDP . . . C 3 -15.735 2.421 -18.604 1 20.15 ? O3B GDP 401 A 1 HETATM 5 O O3A GDP . . . C 3 -15.974 1.699 -20.935 1 20.04 ? O3A GDP 401 A 1 HETATM 6 P PA GDP . . . C 3 -16.771 0.994 -22.119 1 20.3 ? PA GDP 401 A 1 HETATM 7 O O1A GDP . . . C 3 -17.336 2.093 -22.962 1 17.98 ? O1A GDP 401 A 1 HETATM 8 O O2A GDP . . . C 3 -17.779 0.06 -21.589 1 19.91 ? O2A GDP 401 A 1 HETATM 9 O O5' GDP . . . C 3 -15.569 0.236 -22.888 1 22.52 ? O5' GDP 401 A 1 HETATM 10 C C5' GDP . . . C 3 -14.515 0.886 -23.634 1 23.64 ? C5' GDP 401 A 1 HETATM 11 C C4' GDP . . . C 3 -14.019 -0.041 -24.727 1 22.21 ? C4' GDP 401 A 1 HETATM 12 O O4' GDP . . . C 3 -13.521 -1.269 -24.144 1 21.07 ? O4' GDP 401 A 1 HETATM 13 C C3' GDP . . . C 3 -15.052 -0.456 -25.776 1 24.09 ? C3' GDP 401 A 1 HETATM 14 O O3' GDP . . . C 3 -14.469 -0.557 -27.07 1 31.2 ? O3' GDP 401 A 1 HETATM 15 C C2' GDP . . . C 3 -15.514 -1.817 -25.269 1 24.73 ? C2' GDP 401 A 1 HETATM 16 O O2' GDP . . . C 3 -16.1 -2.613 -26.294 1 29.05 ? O2' GDP 401 A 1 HETATM 17 C C1' GDP . . . C 3 -14.202 -2.374 -24.703 1 21.58 ? C1' GDP 401 A 1 HETATM 18 N N9 GDP . . . C 3 -14.355 -3.408 -23.666 1 22.55 ? N9 GDP 401 A 1 HETATM 19 C C8 GDP . . . C 3 -15.16 -3.365 -22.552 1 23.2 ? C8 GDP 401 A 1 HETATM 20 N N7 GDP . . . C 3 -15.229 -4.505 -21.9 1 22.6 ? N7 GDP 401 A 1 HETATM 21 C C5 GDP . . . C 3 -14.379 -5.349 -22.6 1 22.97 ? C5 GDP 401 A 1 HETATM 22 C C6 GDP . . . C 3 -13.969 -6.729 -22.367 1 23.3 ? C6 GDP 401 A 1 HETATM 23 O O6 GDP . . . C 3 -14.337 -7.483 -21.468 1 24.87 ? O6 GDP 401 A 1 HETATM 24 N N1 GDP . . . C 3 -13.059 -7.172 -23.313 1 24.73 ? N1 GDP 401 A 1 HETATM 25 C C2 GDP . . . C 3 -12.565 -6.427 -24.356 1 22.86 ? C2 GDP 401 A 1 HETATM 26 N N2 GDP . . . C 3 -11.661 -7.021 -25.142 1 22.73 ? N2 GDP 401 A 1 HETATM 27 N N3 GDP . . . C 3 -12.922 -5.162 -24.595 1 25.87 ? N3 GDP 401 A 1 HETATM 28 C C4 GDP . . . C 3 -13.826 -4.683 -23.693 1 25.9 ? C4 GDP 401 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 28 #