data_5JD8
#
_model_server_result.job_id            f8jswZh6bIJ9ycE56zMzCw 
_model_server_result.datetime_utc      '2024-11-05 00:22:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5jd8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    5JD8 
#
_exptl.entry_id    5JD8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.317 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-CYCLOHEXYL-1-PROPYLSULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5JD8 
_cell.length_a            104.418 
_cell.length_b            104.418 
_cell.length_c            76.015 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5JD8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 52.209 90.428641 0 
3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -52.209 90.428641 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C9 H19 N O3 S' 
_chem_comp.formula_weight    221.317 
_chem_comp.id                CXS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-CYCLOHEXYL-1-PROPYLSULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 CXS doub 70 n n 
S O2 CXS doub 71 n n 
S O3 CXS sing 72 n n 
S C1 CXS sing 73 n n 
O3 HO3 CXS sing 74 n n 
C1 C2 CXS sing 75 n n 
C1 H11 CXS sing 76 n n 
C1 H12 CXS sing 77 n n 
C2 C3 CXS sing 78 n n 
C2 H21 CXS sing 79 n n 
C2 H22 CXS sing 80 n n 
C3 N CXS sing 81 n n 
C3 H31 CXS sing 82 n n 
C3 H32 CXS sing 83 n n 
N C4 CXS sing 84 n n 
N HN CXS sing 85 n n 
C4 C5 CXS sing 86 n n 
C4 C9 CXS sing 87 n n 
C4 H4 CXS sing 88 n n 
C5 C6 CXS sing 89 n n 
C5 H51 CXS sing 90 n n 
C5 H52 CXS sing 91 n n 
C6 C7 CXS sing 92 n n 
C6 H61 CXS sing 93 n n 
C6 H62 CXS sing 94 n n 
C7 C8 CXS sing 95 n n 
C7 H71 CXS sing 96 n n 
C7 H72 CXS sing 97 n n 
C8 C9 CXS sing 98 n n 
C8 H81 CXS sing 99 n n 
C8 H82 CXS sing 100 n n 
C9 H91 CXS sing 101 n n 
C9 H92 CXS sing 102 n n 
#
_atom_sites.entry_id                     5JD8 
_atom_sites.fract_transf_matrix[1][1]    0.009577 
_atom_sites.fract_transf_matrix[1][2]    0.005529 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011058 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013155 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CXS A 1 401 1 CXS CXS . 
C 3 PEG A 1 402 1 PEG PEG . 
D 4 SO4 A 1 403 1 SO4 SO4 . 
E 5 HOH A 1 501 192 HOH HOH . 
E 5 HOH A 2 502 55 HOH HOH . 
E 5 HOH A 3 503 62 HOH HOH . 
E 5 HOH A 4 504 116 HOH HOH . 
E 5 HOH A 5 505 51 HOH HOH . 
E 5 HOH A 6 506 48 HOH HOH . 
E 5 HOH A 7 507 7 HOH HOH . 
E 5 HOH A 8 508 49 HOH HOH . 
E 5 HOH A 9 509 37 HOH HOH . 
E 5 HOH A 10 510 43 HOH HOH . 
E 5 HOH A 11 511 12 HOH HOH . 
E 5 HOH A 12 512 27 HOH HOH . 
E 5 HOH A 13 513 19 HOH HOH . 
E 5 HOH A 14 514 67 HOH HOH . 
E 5 HOH A 15 515 1 HOH HOH . 
E 5 HOH A 16 516 45 HOH HOH . 
E 5 HOH A 17 517 83 HOH HOH . 
E 5 HOH A 18 518 63 HOH HOH . 
E 5 HOH A 19 519 13 HOH HOH . 
E 5 HOH A 20 520 3 HOH HOH . 
E 5 HOH A 21 521 223 HOH HOH . 
E 5 HOH A 22 522 220 HOH HOH . 
E 5 HOH A 23 523 15 HOH HOH . 
E 5 HOH A 24 524 107 HOH HOH . 
E 5 HOH A 25 525 44 HOH HOH . 
E 5 HOH A 26 526 40 HOH HOH . 
E 5 HOH A 27 527 26 HOH HOH . 
E 5 HOH A 28 528 35 HOH HOH . 
E 5 HOH A 29 529 11 HOH HOH . 
E 5 HOH A 30 530 66 HOH HOH . 
E 5 HOH A 31 531 6 HOH HOH . 
E 5 HOH A 32 532 91 HOH HOH . 
E 5 HOH A 33 533 56 HOH HOH . 
E 5 HOH A 34 534 16 HOH HOH . 
E 5 HOH A 35 535 9 HOH HOH . 
E 5 HOH A 36 536 221 HOH HOH . 
E 5 HOH A 37 537 2 HOH HOH . 
E 5 HOH A 38 538 71 HOH HOH . 
E 5 HOH A 39 539 69 HOH HOH . 
E 5 HOH A 40 540 86 HOH HOH . 
E 5 HOH A 41 541 74 HOH HOH . 
E 5 HOH A 42 542 47 HOH HOH . 
E 5 HOH A 43 543 170 HOH HOH . 
E 5 HOH A 44 544 25 HOH HOH . 
E 5 HOH A 45 545 17 HOH HOH . 
E 5 HOH A 46 546 21 HOH HOH . 
E 5 HOH A 47 547 18 HOH HOH . 
E 5 HOH A 48 548 171 HOH HOH . 
E 5 HOH A 49 549 78 HOH HOH . 
E 5 HOH A 50 550 214 HOH HOH . 
E 5 HOH A 51 551 90 HOH HOH . 
E 5 HOH A 52 552 133 HOH HOH . 
E 5 HOH A 53 553 186 HOH HOH . 
E 5 HOH A 54 554 36 HOH HOH . 
E 5 HOH A 55 555 57 HOH HOH . 
E 5 HOH A 56 556 68 HOH HOH . 
E 5 HOH A 57 557 29 HOH HOH . 
E 5 HOH A 58 558 32 HOH HOH . 
E 5 HOH A 59 559 53 HOH HOH . 
E 5 HOH A 60 560 8 HOH HOH . 
E 5 HOH A 61 561 14 HOH HOH . 
E 5 HOH A 62 562 82 HOH HOH . 
E 5 HOH A 63 563 50 HOH HOH . 
E 5 HOH A 64 564 213 HOH HOH . 
E 5 HOH A 65 565 81 HOH HOH . 
E 5 HOH A 66 566 194 HOH HOH . 
E 5 HOH A 67 567 110 HOH HOH . 
E 5 HOH A 68 568 125 HOH HOH . 
E 5 HOH A 69 569 72 HOH HOH . 
E 5 HOH A 70 570 85 HOH HOH . 
E 5 HOH A 71 571 4 HOH HOH . 
E 5 HOH A 72 572 24 HOH HOH . 
E 5 HOH A 73 573 31 HOH HOH . 
E 5 HOH A 74 574 212 HOH HOH . 
E 5 HOH A 75 575 34 HOH HOH . 
E 5 HOH A 76 576 202 HOH HOH . 
E 5 HOH A 77 577 164 HOH HOH . 
E 5 HOH A 78 578 119 HOH HOH . 
E 5 HOH A 79 579 102 HOH HOH . 
E 5 HOH A 80 580 94 HOH HOH . 
E 5 HOH A 81 581 97 HOH HOH . 
E 5 HOH A 82 582 5 HOH HOH . 
E 5 HOH A 83 583 28 HOH HOH . 
E 5 HOH A 84 584 129 HOH HOH . 
E 5 HOH A 85 585 89 HOH HOH . 
E 5 HOH A 86 586 182 HOH HOH . 
E 5 HOH A 87 587 64 HOH HOH . 
E 5 HOH A 88 588 73 HOH HOH . 
E 5 HOH A 89 589 162 HOH HOH . 
E 5 HOH A 90 590 185 HOH HOH . 
E 5 HOH A 91 591 115 HOH HOH . 
E 5 HOH A 92 592 10 HOH HOH . 
E 5 HOH A 93 593 198 HOH HOH . 
E 5 HOH A 94 594 180 HOH HOH . 
E 5 HOH A 95 595 98 HOH HOH . 
E 5 HOH A 96 596 174 HOH HOH . 
E 5 HOH A 97 597 218 HOH HOH . 
E 5 HOH A 98 598 215 HOH HOH . 
E 5 HOH A 99 599 184 HOH HOH . 
E 5 HOH A 100 600 92 HOH HOH . 
E 5 HOH A 101 601 151 HOH HOH . 
E 5 HOH A 102 602 149 HOH HOH . 
E 5 HOH A 103 603 222 HOH HOH . 
E 5 HOH A 104 604 138 HOH HOH . 
E 5 HOH A 105 605 113 HOH HOH . 
E 5 HOH A 106 606 219 HOH HOH . 
E 5 HOH A 107 607 189 HOH HOH . 
E 5 HOH A 108 608 207 HOH HOH . 
E 5 HOH A 109 609 187 HOH HOH . 
E 5 HOH A 110 610 120 HOH HOH . 
E 5 HOH A 111 611 211 HOH HOH . 
E 5 HOH A 112 612 132 HOH HOH . 
E 5 HOH A 113 613 154 HOH HOH . 
E 5 HOH A 114 614 176 HOH HOH . 
E 5 HOH A 115 615 65 HOH HOH . 
E 5 HOH A 116 616 209 HOH HOH . 
E 5 HOH A 117 617 190 HOH HOH . 
E 5 HOH A 118 618 193 HOH HOH . 
E 5 HOH A 119 619 136 HOH HOH . 
E 5 HOH A 120 620 148 HOH HOH . 
E 5 HOH A 121 621 59 HOH HOH . 
E 5 HOH A 122 622 208 HOH HOH . 
E 5 HOH A 123 623 163 HOH HOH . 
E 5 HOH A 124 624 178 HOH HOH . 
E 5 HOH A 125 625 205 HOH HOH . 
E 5 HOH A 126 626 80 HOH HOH . 
E 5 HOH A 127 627 101 HOH HOH . 
E 5 HOH A 128 628 196 HOH HOH . 
E 5 HOH A 129 629 175 HOH HOH . 
E 5 HOH A 130 630 195 HOH HOH . 
E 5 HOH A 131 631 201 HOH HOH . 
E 5 HOH A 132 632 106 HOH HOH . 
E 5 HOH A 133 633 224 HOH HOH . 
E 5 HOH A 134 634 188 HOH HOH . 
E 5 HOH A 135 635 150 HOH HOH . 
E 5 HOH A 136 636 217 HOH HOH . 
E 5 HOH A 137 637 144 HOH HOH . 
E 5 HOH A 138 638 210 HOH HOH . 
E 5 HOH A 139 639 204 HOH HOH . 
E 5 HOH A 140 640 77 HOH HOH . 
E 5 HOH A 141 641 206 HOH HOH . 
E 5 HOH A 142 642 179 HOH HOH . 
E 5 HOH A 143 643 30 HOH HOH . 
E 5 HOH A 144 644 216 HOH HOH . 
E 5 HOH A 145 645 181 HOH HOH . 
E 5 HOH A 146 646 183 HOH HOH . 
E 5 HOH A 147 647 142 HOH HOH . 
E 5 HOH A 148 648 123 HOH HOH . 
E 5 HOH A 149 649 191 HOH HOH . 
E 5 HOH A 150 650 87 HOH HOH . 
E 5 HOH A 151 651 127 HOH HOH . 
E 5 HOH A 152 652 112 HOH HOH . 
E 5 HOH A 153 653 165 HOH HOH . 
E 5 HOH A 154 654 173 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S CXS . . . B 2 35.972 38.161 43.139 1 48.4 ? S CXS 401 A 1 
HETATM 2 O O1 CXS . . . B 2 36.018 37.549 41.677 1 29.4 ? O1 CXS 401 A 1 
HETATM 3 O O2 CXS . . . B 2 36.857 39.321 43.251 1 45.01 ? O2 CXS 401 A 1 
HETATM 4 O O3 CXS . . . B 2 36.321 37.113 44.083 1 47.66 ? O3 CXS 401 A 1 
HETATM 5 C C1 CXS . . . B 2 34.464 38.781 43.591 1 43.52 ? C1 CXS 401 A 1 
HETATM 6 C C2 CXS . . . B 2 34.032 39.936 42.691 1 41.93 ? C2 CXS 401 A 1 
HETATM 7 C C3 CXS . . . B 2 32.52 40.066 42.739 1 39.96 ? C3 CXS 401 A 1 
HETATM 8 N N CXS . . . B 2 31.804 39.588 41.581 1 37.89 ? N CXS 401 A 1 
HETATM 9 C C4 CXS . . . B 2 30.376 39.182 41.577 1 38.97 ? C4 CXS 401 A 1 
HETATM 10 C C5 CXS . . . B 2 29.55 39.592 42.793 1 34 ? C5 CXS 401 A 1 
HETATM 11 C C6 CXS . . . B 2 28.054 39.824 42.536 1 33.75 ? C6 CXS 401 A 1 
HETATM 12 C C7 CXS . . . B 2 27.411 39.056 41.388 1 35.21 ? C7 CXS 401 A 1 
HETATM 13 C C8 CXS . . . B 2 28.268 39.025 40.094 1 38.52 ? C8 CXS 401 A 1 
HETATM 14 C C9 CXS . . . B 2 29.699 39.54 40.281 1 36.29 ? C9 CXS 401 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#