data_5JG6 # _model_server_result.job_id z8g7LiJxFAT-1RQduobfdA _model_server_result.datetime_utc '2024-12-26 22:26:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jg6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":102}' # _entry.id 5JG6 # _exptl.entry_id 5JG6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 120.42 _cell.angle_gamma 90 _cell.entry_id 5JG6 _cell.length_a 131.066 _cell.length_b 35.193 _cell.length_c 72.768 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JG6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 9 A CYS 23 1_555 E ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc2 A SG CYS 12 A CYS 26 1_555 E ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc3 A SG CYS 20 A CYS 34 1_555 F ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc4 A SG CYS 23 A CYS 37 1_555 F ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc5 A SG CYS 30 A CYS 44 1_555 F ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc6 A SG CYS 37 A CYS 51 1_555 G ZN ZN . A ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc7 A ND1 HIS 39 A HIS 53 1_555 G ZN ZN . A ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc8 A ND1 HIS 42 A HIS 56 1_555 E ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc9 A ND1 HIS 44 A HIS 58 1_555 F ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc10 A SG CYS 45 A CYS 59 1_555 E ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc11 A SG CYS 59 A CYS 73 1_555 G ZN ZN . A ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc12 A SG CYS 62 A CYS 76 1_555 G ZN ZN . A ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc13 D SG CYS 9 D CYS 23 1_555 H ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc14 D SG CYS 12 D CYS 26 1_555 H ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc15 D SG CYS 20 D CYS 34 1_555 J ZN ZN . D ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc16 D SG CYS 23 D CYS 37 1_555 J ZN ZN . D ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc17 D SG CYS 30 D CYS 44 1_555 J ZN ZN . D ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc18 D SG CYS 37 D CYS 51 1_555 I ZN ZN . D ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc19 D ND1 HIS 39 D HIS 53 1_555 I ZN ZN . D ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc20 D ND1 HIS 42 D HIS 56 1_555 H ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc21 D ND1 HIS 44 D HIS 58 1_555 J ZN ZN . D ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc22 D SG CYS 45 D CYS 59 1_555 H ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc23 D SG CYS 59 D CYS 73 1_555 I ZN ZN . D ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc24 D SG CYS 62 D CYS 76 1_555 I ZN ZN . D ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5JG6 _atom_sites.fract_transf_matrix[1][1] 0.00763 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004481 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028415 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 101 1 ZN ZN . F 3 ZN A 1 102 2 ZN ZN . G 3 ZN A 1 103 3 ZN ZN . H 3 ZN D 1 101 4 ZN ZN . I 3 ZN D 1 102 5 ZN ZN . J 3 ZN D 1 103 6 ZN ZN . K 4 HOH A 1 201 18 HOH HOH . K 4 HOH A 2 202 4 HOH HOH . K 4 HOH A 3 203 80 HOH HOH . K 4 HOH A 4 204 14 HOH HOH . K 4 HOH A 5 205 90 HOH HOH . K 4 HOH A 6 206 77 HOH HOH . K 4 HOH A 7 207 24 HOH HOH . K 4 HOH A 8 208 100 HOH HOH . K 4 HOH A 9 209 28 HOH HOH . K 4 HOH A 10 210 23 HOH HOH . K 4 HOH A 11 211 3 HOH HOH . K 4 HOH A 12 212 41 HOH HOH . K 4 HOH A 13 213 69 HOH HOH . K 4 HOH A 14 214 15 HOH HOH . K 4 HOH A 15 215 29 HOH HOH . K 4 HOH A 16 216 74 HOH HOH . K 4 HOH A 17 217 107 HOH HOH . K 4 HOH A 18 218 97 HOH HOH . K 4 HOH A 19 219 112 HOH HOH . K 4 HOH A 20 220 94 HOH HOH . L 4 HOH B 1 101 87 HOH HOH . L 4 HOH B 2 102 46 HOH HOH . L 4 HOH B 3 103 34 HOH HOH . L 4 HOH B 4 104 21 HOH HOH . L 4 HOH B 5 105 61 HOH HOH . L 4 HOH B 6 106 70 HOH HOH . L 4 HOH B 7 107 53 HOH HOH . L 4 HOH B 8 108 59 HOH HOH . L 4 HOH B 9 109 71 HOH HOH . L 4 HOH B 10 110 16 HOH HOH . L 4 HOH B 11 111 11 HOH HOH . L 4 HOH B 12 112 27 HOH HOH . L 4 HOH B 13 113 25 HOH HOH . L 4 HOH B 14 114 76 HOH HOH . L 4 HOH B 15 115 93 HOH HOH . L 4 HOH B 16 116 56 HOH HOH . L 4 HOH B 17 117 57 HOH HOH . L 4 HOH B 18 118 39 HOH HOH . L 4 HOH B 19 119 64 HOH HOH . L 4 HOH B 20 120 88 HOH HOH . L 4 HOH B 21 121 85 HOH HOH . L 4 HOH B 22 122 33 HOH HOH . L 4 HOH B 23 123 12 HOH HOH . L 4 HOH B 24 124 89 HOH HOH . L 4 HOH B 25 125 104 HOH HOH . L 4 HOH B 26 126 17 HOH HOH . L 4 HOH B 27 127 31 HOH HOH . L 4 HOH B 28 128 91 HOH HOH . L 4 HOH B 29 129 65 HOH HOH . L 4 HOH B 30 130 6 HOH HOH . L 4 HOH B 31 131 103 HOH HOH . L 4 HOH B 32 132 83 HOH HOH . L 4 HOH B 33 133 79 HOH HOH . L 4 HOH B 34 134 92 HOH HOH . L 4 HOH B 35 135 40 HOH HOH . L 4 HOH B 36 136 111 HOH HOH . L 4 HOH B 37 137 101 HOH HOH . L 4 HOH B 38 138 109 HOH HOH . L 4 HOH B 39 139 75 HOH HOH . L 4 HOH B 40 140 62 HOH HOH . L 4 HOH B 41 141 54 HOH HOH . M 4 HOH C 1 101 52 HOH HOH . M 4 HOH C 2 102 108 HOH HOH . M 4 HOH C 3 103 55 HOH HOH . M 4 HOH C 4 104 22 HOH HOH . M 4 HOH C 5 105 68 HOH HOH . M 4 HOH C 6 106 49 HOH HOH . M 4 HOH C 7 107 37 HOH HOH . M 4 HOH C 8 108 9 HOH HOH . M 4 HOH C 9 109 60 HOH HOH . M 4 HOH C 10 110 1 HOH HOH . M 4 HOH C 11 111 30 HOH HOH . M 4 HOH C 12 112 8 HOH HOH . M 4 HOH C 13 113 50 HOH HOH . M 4 HOH C 14 114 38 HOH HOH . M 4 HOH C 15 115 72 HOH HOH . M 4 HOH C 16 116 32 HOH HOH . M 4 HOH C 17 117 44 HOH HOH . M 4 HOH C 18 118 58 HOH HOH . M 4 HOH C 19 119 84 HOH HOH . M 4 HOH C 20 120 10 HOH HOH . M 4 HOH C 21 121 81 HOH HOH . M 4 HOH C 22 122 86 HOH HOH . M 4 HOH C 23 123 98 HOH HOH . M 4 HOH C 24 124 26 HOH HOH . M 4 HOH C 25 125 99 HOH HOH . M 4 HOH C 26 126 110 HOH HOH . M 4 HOH C 27 127 116 HOH HOH . M 4 HOH C 28 128 67 HOH HOH . M 4 HOH C 29 129 113 HOH HOH . M 4 HOH C 30 130 105 HOH HOH . M 4 HOH C 31 131 102 HOH HOH . M 4 HOH C 32 132 47 HOH HOH . M 4 HOH C 33 133 63 HOH HOH . N 4 HOH D 1 201 13 HOH HOH . N 4 HOH D 2 202 7 HOH HOH . N 4 HOH D 3 203 45 HOH HOH . N 4 HOH D 4 204 115 HOH HOH . N 4 HOH D 5 205 36 HOH HOH . N 4 HOH D 6 206 106 HOH HOH . N 4 HOH D 7 207 35 HOH HOH . N 4 HOH D 8 208 48 HOH HOH . N 4 HOH D 9 209 43 HOH HOH . N 4 HOH D 10 210 51 HOH HOH . N 4 HOH D 11 211 5 HOH HOH . N 4 HOH D 12 212 2 HOH HOH . N 4 HOH D 13 213 73 HOH HOH . N 4 HOH D 14 214 19 HOH HOH . N 4 HOH D 15 215 20 HOH HOH . N 4 HOH D 16 216 95 HOH HOH . N 4 HOH D 17 217 42 HOH HOH . N 4 HOH D 18 218 82 HOH HOH . N 4 HOH D 19 219 114 HOH HOH . N 4 HOH D 20 220 96 HOH HOH . N 4 HOH D 21 221 78 HOH HOH . N 4 HOH D 22 222 66 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -19.915 _atom_site.Cartn_y 18.825 _atom_site.Cartn_z 22.942 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #