data_5JHB # _model_server_result.job_id -tYTf5Ik4qUqldMsvqbjyA _model_server_result.datetime_utc '2024-11-17 00:24:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jhb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 5JHB # _exptl.entry_id 5JHB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 459.853 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[1-{4-[6-amino-4-(trifluoromethyl)pyridin-3-yl]-6-(morpholin-4-yl)-1,3,5-triazin-2-yl}-3-(chloromethyl)azetidin-3-yl]methanol' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.23 _cell.angle_gamma 90 _cell.entry_id 5JHB _cell.length_a 142.53 _cell.length_b 67.6 _cell.length_c 106.55 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JHB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H21 Cl F3 N7 O2' _chem_comp.formula_weight 459.853 _chem_comp.id 6K5 _chem_comp.mon_nstd_flag . _chem_comp.name '[1-{4-[6-amino-4-(trifluoromethyl)pyridin-3-yl]-6-(morpholin-4-yl)-1,3,5-triazin-2-yl}-3-(chloromethyl)azetidin-3-yl]methanol' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FAB CAG 6K5 sing 1 n n FAF CAG 6K5 sing 2 n n FAK CAG 6K5 sing 3 n n CAG CAH 6K5 sing 4 n n CAV CBA 6K5 sing 5 n n CAV NAU 6K5 sing 6 n n CBB CBA 6K5 sing 7 n n CBB OBC 6K5 sing 8 n n CAC CAH 6K5 doub 9 n y CAC CAD 6K5 sing 10 n y CBD CBA 6K5 sing 11 n n CBD CL 6K5 sing 12 n n CAH CAI 6K5 sing 13 n y CBA CAZ 6K5 sing 14 n n NAA CAD 6K5 sing 15 n n CAD NAE 6K5 doub 16 n y NAU CAO 6K5 sing 17 n n NAU CAZ 6K5 sing 18 n n NAL CAO 6K5 doub 19 n y NAL CAM 6K5 sing 20 n y CAI CAM 6K5 sing 21 n n CAI CAJ 6K5 doub 22 n y CAO NAP 6K5 sing 23 n y CAM NAN 6K5 doub 24 n y NAE CAJ 6K5 sing 25 n y NAP CAQ 6K5 doub 26 n y NAN CAQ 6K5 sing 27 n y CAQ NAR 6K5 sing 28 n n CAW NAR 6K5 sing 29 n n CAW CAX 6K5 sing 30 n n NAR CAS 6K5 sing 31 n n CAS CAT 6K5 sing 32 n n CAX OAY 6K5 sing 33 n n OAY CAT 6K5 sing 34 n n CAC HAC1 6K5 sing 35 n n NAA HAA1 6K5 sing 36 n n NAA HAA2 6K5 sing 37 n n CAJ HAJ1 6K5 sing 38 n n CAZ HAZ2 6K5 sing 39 n n CAZ HAZ1 6K5 sing 40 n n CAV HAV1 6K5 sing 41 n n CAV HAV2 6K5 sing 42 n n CBD HBD1 6K5 sing 43 n n CBD HBD2 6K5 sing 44 n n CBB HBB1 6K5 sing 45 n n CBB HBB2 6K5 sing 46 n n OBC HBC1 6K5 sing 47 n n CAS HAS2 6K5 sing 48 n n CAS HAS1 6K5 sing 49 n n CAT HAT2 6K5 sing 50 n n CAT HAT1 6K5 sing 51 n n CAX HAX1 6K5 sing 52 n n CAX HAX2 6K5 sing 53 n n CAW HAW1 6K5 sing 54 n n CAW HAW2 6K5 sing 55 n n # _atom_sites.entry_id 5JHB _atom_sites.fract_transf_matrix[1][1] 0.007016 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000766 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014793 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009441 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6K5 A 1 1201 2 6K5 DRG . C 3 SO4 A 1 1202 1 SO4 SO4 . D 4 HOH A 1 1301 28 HOH HOH . D 4 HOH A 2 1302 3 HOH HOH . D 4 HOH A 3 1303 24 HOH HOH . D 4 HOH A 4 1304 20 HOH HOH . D 4 HOH A 5 1305 9 HOH HOH . D 4 HOH A 6 1306 12 HOH HOH . D 4 HOH A 7 1307 19 HOH HOH . D 4 HOH A 8 1308 22 HOH HOH . D 4 HOH A 9 1309 14 HOH HOH . D 4 HOH A 10 1310 7 HOH HOH . D 4 HOH A 11 1311 35 HOH HOH . D 4 HOH A 12 1312 2 HOH HOH . D 4 HOH A 13 1313 11 HOH HOH . D 4 HOH A 14 1314 31 HOH HOH . D 4 HOH A 15 1315 18 HOH HOH . D 4 HOH A 16 1316 17 HOH HOH . D 4 HOH A 17 1317 4 HOH HOH . D 4 HOH A 18 1318 6 HOH HOH . D 4 HOH A 19 1319 26 HOH HOH . D 4 HOH A 20 1320 32 HOH HOH . D 4 HOH A 21 1321 15 HOH HOH . D 4 HOH A 22 1322 27 HOH HOH . D 4 HOH A 23 1323 1 HOH HOH . D 4 HOH A 24 1324 29 HOH HOH . D 4 HOH A 25 1325 5 HOH HOH . D 4 HOH A 26 1326 23 HOH HOH . D 4 HOH A 27 1327 10 HOH HOH . D 4 HOH A 28 1328 30 HOH HOH . D 4 HOH A 29 1329 33 HOH HOH . D 4 HOH A 30 1330 21 HOH HOH . D 4 HOH A 31 1331 25 HOH HOH . D 4 HOH A 32 1332 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FAB 6K5 . . . B 2 24.802 -5.047 16.933 1 84.29 ? FAB 6K5 1201 A 1 HETATM 2 C CAG 6K5 . . . B 2 24.286 -4.707 18.128 1 77.09 ? CAG 6K5 1201 A 1 HETATM 3 F FAF 6K5 . . . B 2 22.99 -5.04 18.057 1 77.89 ? FAF 6K5 1201 A 1 HETATM 4 F FAK 6K5 . . . B 2 24.278 -3.351 18.083 1 82.16 ? FAK 6K5 1201 A 1 HETATM 5 C CAH 6K5 . . . B 2 24.988 -5.32 19.335 1 72 ? CAH 6K5 1201 A 1 HETATM 6 C CAC 6K5 . . . B 2 26.306 -5.794 19.105 1 67.05 ? CAC 6K5 1201 A 1 HETATM 7 C CAD 6K5 . . . B 2 27.039 -6.375 20.172 1 69.37 ? CAD 6K5 1201 A 1 HETATM 8 N NAA 6K5 . . . B 2 28.332 -6.863 20.022 1 75.18 ? NAA 6K5 1201 A 1 HETATM 9 N NAE 6K5 . . . B 2 26.416 -6.446 21.406 1 71.39 ? NAE 6K5 1201 A 1 HETATM 10 C CAJ 6K5 . . . B 2 25.156 -5.967 21.544 1 73.66 ? CAJ 6K5 1201 A 1 HETATM 11 C CAI 6K5 . . . B 2 24.315 -5.363 20.582 1 67.3 ? CAI 6K5 1201 A 1 HETATM 12 C CAM 6K5 . . . B 2 22.859 -4.855 20.918 1 79.06 ? CAM 6K5 1201 A 1 HETATM 13 N NAN 6K5 . . . B 2 22.106 -5.64 21.78 1 87.58 ? NAN 6K5 1201 A 1 HETATM 14 N NAL 6K5 . . . B 2 22.38 -3.674 20.37 1 70.03 ? NAL 6K5 1201 A 1 HETATM 15 C CAO 6K5 . . . B 2 21.071 -3.273 20.713 1 71.49 ? CAO 6K5 1201 A 1 HETATM 16 N NAU 6K5 . . . B 2 20.457 -2.051 20.197 1 79.81 ? NAU 6K5 1201 A 1 HETATM 17 C CAZ 6K5 . . . B 2 19.788 -0.848 20.841 1 77.38 ? CAZ 6K5 1201 A 1 HETATM 18 C CAV 6K5 . . . B 2 19.941 -1.622 18.861 1 84.03 ? CAV 6K5 1201 A 1 HETATM 19 C CBA 6K5 . . . B 2 19.258 -0.312 19.451 1 98.25 ? CBA 6K5 1201 A 1 HETATM 20 C CBD 6K5 . . . B 2 17.735 -0.275 19.196 1 101.62 ? CBD 6K5 1201 A 1 HETATM 21 CL CL 6K5 . . . B 2 16.648 -0.714 20.671 1 139.74 ? CL 6K5 1201 A 1 HETATM 22 C CBB 6K5 . . . B 2 19.918 1.002 18.92 1 108.05 ? CBB 6K5 1201 A 1 HETATM 23 O OBC 6K5 . . . B 2 19.638 2.055 19.806 1 110.57 ? OBC 6K5 1201 A 1 HETATM 24 N NAP 6K5 . . . B 2 20.294 -4.034 21.57 1 73.93 ? NAP 6K5 1201 A 1 HETATM 25 C CAQ 6K5 . . . B 2 20.835 -5.206 22.084 1 76.24 ? CAQ 6K5 1201 A 1 HETATM 26 N NAR 6K5 . . . B 2 19.909 -5.932 23 1 73.03 ? NAR 6K5 1201 A 1 HETATM 27 C CAS 6K5 . . . B 2 20.184 -7.356 23.4 1 64.22 ? CAS 6K5 1201 A 1 HETATM 28 C CAT 6K5 . . . B 2 19.264 -7.814 24.573 1 60.35 ? CAT 6K5 1201 A 1 HETATM 29 O OAY 6K5 . . . B 2 17.908 -7.59 24.327 1 77.85 ? OAY 6K5 1201 A 1 HETATM 30 C CAX 6K5 . . . B 2 17.613 -6.259 24.015 1 72.46 ? CAX 6K5 1201 A 1 HETATM 31 C CAW 6K5 . . . B 2 18.429 -5.771 22.788 1 69.92 ? CAW 6K5 1201 A 1 HETATM 32 H HAC1 6K5 . . . B 2 26.798 -5.738 18.125 1 80.46 ? HAC1 6K5 1201 A 1 HETATM 33 H HAA1 6K5 . . . B 2 28.536 -7.74 19.575 1 90.22 ? HAA1 6K5 1201 A 1 HETATM 34 H HAA2 6K5 . . . B 2 29.15 -6.378 20.348 1 90.22 ? HAA2 6K5 1201 A 1 HETATM 35 H HAJ1 6K5 . . . B 2 24.836 -6.106 22.58 1 88.39 ? HAJ1 6K5 1201 A 1 HETATM 36 H HAZ2 6K5 . . . B 2 20.451 -0.114 21.332 1 92.86 ? HAZ2 6K5 1201 A 1 HETATM 37 H HAZ1 6K5 . . . B 2 18.948 -1.062 21.525 1 92.86 ? HAZ1 6K5 1201 A 1 HETATM 38 H HAV1 6K5 . . . B 2 20.679 -1.388 18.072 1 100.83 ? HAV1 6K5 1201 A 1 HETATM 39 H HAV2 6K5 . . . B 2 19.186 -2.288 18.399 1 100.83 ? HAV2 6K5 1201 A 1 HETATM 40 H HBD1 6K5 . . . B 2 17.399 -0.994 18.436 1 121.94 ? HBD1 6K5 1201 A 1 HETATM 41 H HBD2 6K5 . . . B 2 17.343 0.707 18.871 1 121.94 ? HBD2 6K5 1201 A 1 HETATM 42 H HBB1 6K5 . . . B 2 19.547 1.255 17.897 1 129.65 ? HBB1 6K5 1201 A 1 HETATM 43 H HBB2 6K5 . . . B 2 21.013 0.85 18.796 1 129.65 ? HBB2 6K5 1201 A 1 HETATM 44 H HBC1 6K5 . . . B 2 20.399 2.146 20.384 1 132.68 ? HBC1 6K5 1201 A 1 HETATM 45 H HAS2 6K5 . . . B 2 19.983 -8.039 22.556 1 77.07 ? HAS2 6K5 1201 A 1 HETATM 46 H HAS1 6K5 . . . B 2 21.229 -7.565 23.734 1 77.07 ? HAS1 6K5 1201 A 1 HETATM 47 H HAT2 6K5 . . . B 2 19.448 -8.866 24.88 1 72.42 ? HAT2 6K5 1201 A 1 HETATM 48 H HAT1 6K5 . . . B 2 19.469 -7.226 25.499 1 72.42 ? HAT1 6K5 1201 A 1 HETATM 49 H HAX1 6K5 . . . B 2 16.519 -6.096 23.913 1 86.95 ? HAX1 6K5 1201 A 1 HETATM 50 H HAX2 6K5 . . . B 2 17.888 -5.691 24.934 1 86.95 ? HAX2 6K5 1201 A 1 HETATM 51 H HAW1 6K5 . . . B 2 18.099 -6.367 21.919 1 83.9 ? HAW1 6K5 1201 A 1 HETATM 52 H HAW2 6K5 . . . B 2 18.094 -4.721 22.597 1 83.9 ? HAW2 6K5 1201 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 52 #