data_5JIG # _model_server_result.job_id XJAWonOsVAc9zkd4unes0g _model_server_result.datetime_utc '2024-10-19 12:26:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jig # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5JIG # _exptl.entry_id 5JIG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JIG _cell.length_a 40.3 _cell.length_b 41.3 _cell.length_c 68.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JIG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 97 A HIS 97 1_555 B NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc2 A NE2 HIS 101 A HIS 101 1_555 B NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc3 A NE2 HIS 107 A HIS 107 1_555 B NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc4 B NI NI . A NI 201 1_555 C O1 OXY . A OXY 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc5 B NI NI . A NI 201 1_555 D O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc6 B NI NI . A NI 201 1_555 D O HOH . A HOH 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5JIG _atom_sites.fract_transf_matrix[1][1] 0.024814 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024213 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014599 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 201 998 NI NI . C 3 OXY A 1 202 999 OXY OXY . D 4 HOH A 1 301 218 HOH HOH . D 4 HOH A 2 302 128 HOH HOH . D 4 HOH A 3 303 214 HOH HOH . D 4 HOH A 4 304 118 HOH HOH . D 4 HOH A 5 305 126 HOH HOH . D 4 HOH A 6 306 233 HOH HOH . D 4 HOH A 7 307 163 HOH HOH . D 4 HOH A 8 308 186 HOH HOH . D 4 HOH A 9 309 88 HOH HOH . D 4 HOH A 10 310 98 HOH HOH . D 4 HOH A 11 311 221 HOH HOH . D 4 HOH A 12 312 8 HOH HOH . D 4 HOH A 13 313 120 HOH HOH . D 4 HOH A 14 314 123 HOH HOH . D 4 HOH A 15 315 40 HOH HOH . D 4 HOH A 16 316 23 HOH HOH . D 4 HOH A 17 317 13 HOH HOH . D 4 HOH A 18 318 30 HOH HOH . D 4 HOH A 19 319 3 HOH HOH . D 4 HOH A 20 320 134 HOH HOH . D 4 HOH A 21 321 97 HOH HOH . D 4 HOH A 22 322 7 HOH HOH . D 4 HOH A 23 323 105 HOH HOH . D 4 HOH A 24 324 22 HOH HOH . D 4 HOH A 25 325 162 HOH HOH . D 4 HOH A 26 326 198 HOH HOH . D 4 HOH A 27 327 2 HOH HOH . D 4 HOH A 28 328 44 HOH HOH . D 4 HOH A 29 329 138 HOH HOH . D 4 HOH A 30 330 27 HOH HOH . D 4 HOH A 31 331 96 HOH HOH . D 4 HOH A 32 332 106 HOH HOH . D 4 HOH A 33 333 42 HOH HOH . D 4 HOH A 34 334 91 HOH HOH . D 4 HOH A 35 335 33 HOH HOH . D 4 HOH A 36 336 146 HOH HOH . D 4 HOH A 37 337 200 HOH HOH . D 4 HOH A 38 338 14 HOH HOH . D 4 HOH A 39 339 82 HOH HOH . D 4 HOH A 40 340 220 HOH HOH . D 4 HOH A 41 341 25 HOH HOH . D 4 HOH A 42 342 21 HOH HOH . D 4 HOH A 43 343 224 HOH HOH . D 4 HOH A 44 344 206 HOH HOH . D 4 HOH A 45 345 71 HOH HOH . D 4 HOH A 46 346 15 HOH HOH . D 4 HOH A 47 347 89 HOH HOH . D 4 HOH A 48 348 158 HOH HOH . D 4 HOH A 49 349 16 HOH HOH . D 4 HOH A 50 350 219 HOH HOH . D 4 HOH A 51 351 141 HOH HOH . D 4 HOH A 52 352 90 HOH HOH . D 4 HOH A 53 353 57 HOH HOH . D 4 HOH A 54 354 10 HOH HOH . D 4 HOH A 55 355 122 HOH HOH . D 4 HOH A 56 356 20 HOH HOH . D 4 HOH A 57 357 11 HOH HOH . D 4 HOH A 58 358 17 HOH HOH . D 4 HOH A 59 359 18 HOH HOH . D 4 HOH A 60 360 175 HOH HOH . D 4 HOH A 61 361 24 HOH HOH . D 4 HOH A 62 362 32 HOH HOH . D 4 HOH A 63 363 104 HOH HOH . D 4 HOH A 64 364 1 HOH HOH . D 4 HOH A 65 365 41 HOH HOH . D 4 HOH A 66 366 49 HOH HOH . D 4 HOH A 67 367 136 HOH HOH . D 4 HOH A 68 368 135 HOH HOH . D 4 HOH A 69 369 114 HOH HOH . D 4 HOH A 70 370 107 HOH HOH . D 4 HOH A 71 371 46 HOH HOH . D 4 HOH A 72 372 85 HOH HOH . D 4 HOH A 73 373 5 HOH HOH . D 4 HOH A 74 374 94 HOH HOH . D 4 HOH A 75 375 64 HOH HOH . D 4 HOH A 76 376 34 HOH HOH . D 4 HOH A 77 377 12 HOH HOH . D 4 HOH A 78 378 133 HOH HOH . D 4 HOH A 79 379 29 HOH HOH . D 4 HOH A 80 380 56 HOH HOH . D 4 HOH A 81 381 60 HOH HOH . D 4 HOH A 82 382 148 HOH HOH . D 4 HOH A 83 383 48 HOH HOH . D 4 HOH A 84 384 153 HOH HOH . D 4 HOH A 85 385 68 HOH HOH . D 4 HOH A 86 386 47 HOH HOH . D 4 HOH A 87 387 53 HOH HOH . D 4 HOH A 88 388 92 HOH HOH . D 4 HOH A 89 389 165 HOH HOH . D 4 HOH A 90 390 86 HOH HOH . D 4 HOH A 91 391 66 HOH HOH . D 4 HOH A 92 392 116 HOH HOH . D 4 HOH A 93 393 58 HOH HOH . D 4 HOH A 94 394 119 HOH HOH . D 4 HOH A 95 395 59 HOH HOH . D 4 HOH A 96 396 61 HOH HOH . D 4 HOH A 97 397 215 HOH HOH . D 4 HOH A 98 398 150 HOH HOH . D 4 HOH A 99 399 160 HOH HOH . D 4 HOH A 100 400 6 HOH HOH . D 4 HOH A 101 401 179 HOH HOH . D 4 HOH A 102 402 87 HOH HOH . D 4 HOH A 103 403 142 HOH HOH . D 4 HOH A 104 404 19 HOH HOH . D 4 HOH A 105 405 35 HOH HOH . D 4 HOH A 106 406 145 HOH HOH . D 4 HOH A 107 407 28 HOH HOH . D 4 HOH A 108 408 225 HOH HOH . D 4 HOH A 109 409 95 HOH HOH . D 4 HOH A 110 410 72 HOH HOH . D 4 HOH A 111 411 26 HOH HOH . D 4 HOH A 112 412 4 HOH HOH . D 4 HOH A 113 413 159 HOH HOH . D 4 HOH A 114 414 70 HOH HOH . D 4 HOH A 115 415 37 HOH HOH . D 4 HOH A 116 416 111 HOH HOH . D 4 HOH A 117 417 189 HOH HOH . D 4 HOH A 118 418 78 HOH HOH . D 4 HOH A 119 419 124 HOH HOH . D 4 HOH A 120 420 52 HOH HOH . D 4 HOH A 121 421 155 HOH HOH . D 4 HOH A 122 422 9 HOH HOH . D 4 HOH A 123 423 43 HOH HOH . D 4 HOH A 124 424 51 HOH HOH . D 4 HOH A 125 425 69 HOH HOH . D 4 HOH A 126 426 55 HOH HOH . D 4 HOH A 127 427 125 HOH HOH . D 4 HOH A 128 428 130 HOH HOH . D 4 HOH A 129 429 166 HOH HOH . D 4 HOH A 130 430 65 HOH HOH . D 4 HOH A 131 431 36 HOH HOH . D 4 HOH A 132 432 132 HOH HOH . D 4 HOH A 133 433 112 HOH HOH . D 4 HOH A 134 434 67 HOH HOH . D 4 HOH A 135 435 115 HOH HOH . D 4 HOH A 136 436 147 HOH HOH . D 4 HOH A 137 437 127 HOH HOH . D 4 HOH A 138 438 109 HOH HOH . D 4 HOH A 139 439 176 HOH HOH . D 4 HOH A 140 440 121 HOH HOH . D 4 HOH A 141 441 100 HOH HOH . D 4 HOH A 142 442 213 HOH HOH . D 4 HOH A 143 443 167 HOH HOH . D 4 HOH A 144 444 181 HOH HOH . D 4 HOH A 145 445 202 HOH HOH . D 4 HOH A 146 446 83 HOH HOH . D 4 HOH A 147 447 99 HOH HOH . D 4 HOH A 148 448 103 HOH HOH . D 4 HOH A 149 449 187 HOH HOH . D 4 HOH A 150 450 178 HOH HOH . D 4 HOH A 151 451 80 HOH HOH . D 4 HOH A 152 452 93 HOH HOH . D 4 HOH A 153 453 161 HOH HOH . D 4 HOH A 154 454 76 HOH HOH . D 4 HOH A 155 455 74 HOH HOH . D 4 HOH A 156 456 149 HOH HOH . D 4 HOH A 157 457 102 HOH HOH . D 4 HOH A 158 458 75 HOH HOH . D 4 HOH A 159 459 203 HOH HOH . D 4 HOH A 160 460 101 HOH HOH . D 4 HOH A 161 461 156 HOH HOH . D 4 HOH A 162 462 137 HOH HOH . D 4 HOH A 163 463 81 HOH HOH . D 4 HOH A 164 464 193 HOH HOH . D 4 HOH A 165 465 129 HOH HOH . D 4 HOH A 166 466 77 HOH HOH . D 4 HOH A 167 467 185 HOH HOH . D 4 HOH A 168 468 182 HOH HOH . D 4 HOH A 169 469 139 HOH HOH . D 4 HOH A 170 470 84 HOH HOH . D 4 HOH A 171 471 171 HOH HOH . D 4 HOH A 172 472 210 HOH HOH . D 4 HOH A 173 473 177 HOH HOH . D 4 HOH A 174 474 73 HOH HOH . D 4 HOH A 175 475 180 HOH HOH . D 4 HOH A 176 476 184 HOH HOH . D 4 HOH A 177 477 140 HOH HOH . D 4 HOH A 178 478 151 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -0.479 _atom_site.Cartn_y -0.703 _atom_site.Cartn_z 20.162 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 8.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 1 #