data_5JJG # _model_server_result.job_id ppVEkB3JjiSK8u250SRo-w _model_server_result.datetime_utc '2024-10-18 17:21:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jjg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5JJG # _exptl.entry_id 5JJG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JJG _cell.length_a 76.53 _cell.length_b 48.529 _cell.length_c 54.35 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JJG _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 48.529 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 14 A ASP 36 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc2 A OD1 ASP 16 A ASP 38 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc3 A OG SER 18 A SER 40 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? metalc ? metalc4 A O VAL 20 A VAL 42 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc5 A OE1 GLU 25 A GLU 47 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc6 A OE2 GLU 25 A GLU 47 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? metalc ? metalc7 A OD1 ASP 81 A ASP 103 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc8 A OD1 ASP 83 A ASP 105 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc9 A OG SER 85 A SER 107 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc10 A O MET 87 A MET 109 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc11 A OD1 ASP 147 A ASP 169 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc12 A OD1 ASP 149 A ASP 171 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc13 A OD1 ASP 151 A ASP 173 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc14 A O TRP 153 A TRP 175 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc15 B MG MG . A MG 201 1_555 H O HOH . A HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc16 C MG MG . A MG 202 1_555 H O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc17 C MG MG . A MG 202 1_555 H O HOH . A HOH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? metalc ? metalc18 D MG MG . A MG 203 1_555 H O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc19 D MG MG . A MG 203 1_555 H O HOH . A HOH 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5JJG _atom_sites.fract_transf_matrix[1][1] 0.013067 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020606 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018399 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 201 1 MG MG . C 2 MG A 1 202 3 MG MG . D 2 MG A 1 203 5 MG MG . E 3 IPA A 1 204 1 IPA IPA . F 3 IPA A 1 205 2 IPA IPA . G 3 IPA A 1 206 3 IPA IPA . H 4 HOH A 1 301 64 HOH HOH . H 4 HOH A 2 302 32 HOH HOH . H 4 HOH A 3 303 71 HOH HOH . H 4 HOH A 4 304 68 HOH HOH . H 4 HOH A 5 305 66 HOH HOH . H 4 HOH A 6 306 81 HOH HOH . H 4 HOH A 7 307 86 HOH HOH . H 4 HOH A 8 308 9 HOH HOH . H 4 HOH A 9 309 3 HOH HOH . H 4 HOH A 10 310 102 HOH HOH . H 4 HOH A 11 311 40 HOH HOH . H 4 HOH A 12 312 14 HOH HOH . H 4 HOH A 13 313 12 HOH HOH . H 4 HOH A 14 314 55 HOH HOH . H 4 HOH A 15 315 50 HOH HOH . H 4 HOH A 16 316 31 HOH HOH . H 4 HOH A 17 317 106 HOH HOH . H 4 HOH A 18 318 38 HOH HOH . H 4 HOH A 19 319 24 HOH HOH . H 4 HOH A 20 320 92 HOH HOH . H 4 HOH A 21 321 29 HOH HOH . H 4 HOH A 22 322 10 HOH HOH . H 4 HOH A 23 323 78 HOH HOH . H 4 HOH A 24 324 80 HOH HOH . H 4 HOH A 25 325 15 HOH HOH . H 4 HOH A 26 326 57 HOH HOH . H 4 HOH A 27 327 36 HOH HOH . H 4 HOH A 28 328 53 HOH HOH . H 4 HOH A 29 329 5 HOH HOH . H 4 HOH A 30 330 2 HOH HOH . H 4 HOH A 31 331 20 HOH HOH . H 4 HOH A 32 332 8 HOH HOH . H 4 HOH A 33 333 48 HOH HOH . H 4 HOH A 34 334 108 HOH HOH . H 4 HOH A 35 335 45 HOH HOH . H 4 HOH A 36 336 77 HOH HOH . H 4 HOH A 37 337 62 HOH HOH . H 4 HOH A 38 338 19 HOH HOH . H 4 HOH A 39 339 54 HOH HOH . H 4 HOH A 40 340 6 HOH HOH . H 4 HOH A 41 341 56 HOH HOH . H 4 HOH A 42 342 17 HOH HOH . H 4 HOH A 43 343 11 HOH HOH . H 4 HOH A 44 344 75 HOH HOH . H 4 HOH A 45 345 51 HOH HOH . H 4 HOH A 46 346 30 HOH HOH . H 4 HOH A 47 347 44 HOH HOH . H 4 HOH A 48 348 27 HOH HOH . H 4 HOH A 49 349 72 HOH HOH . H 4 HOH A 50 350 26 HOH HOH . H 4 HOH A 51 351 76 HOH HOH . H 4 HOH A 52 352 85 HOH HOH . H 4 HOH A 53 353 91 HOH HOH . H 4 HOH A 54 354 39 HOH HOH . H 4 HOH A 55 355 67 HOH HOH . H 4 HOH A 56 356 41 HOH HOH . H 4 HOH A 57 357 79 HOH HOH . H 4 HOH A 58 358 7 HOH HOH . H 4 HOH A 59 359 16 HOH HOH . H 4 HOH A 60 360 35 HOH HOH . H 4 HOH A 61 361 70 HOH HOH . H 4 HOH A 62 362 46 HOH HOH . H 4 HOH A 63 363 18 HOH HOH . H 4 HOH A 64 364 87 HOH HOH . H 4 HOH A 65 365 1 HOH HOH . H 4 HOH A 66 366 73 HOH HOH . H 4 HOH A 67 367 22 HOH HOH . H 4 HOH A 68 368 60 HOH HOH . H 4 HOH A 69 369 34 HOH HOH . H 4 HOH A 70 370 43 HOH HOH . H 4 HOH A 71 371 82 HOH HOH . H 4 HOH A 72 372 49 HOH HOH . H 4 HOH A 73 373 47 HOH HOH . H 4 HOH A 74 374 4 HOH HOH . H 4 HOH A 75 375 25 HOH HOH . H 4 HOH A 76 376 37 HOH HOH . H 4 HOH A 77 377 59 HOH HOH . H 4 HOH A 78 378 89 HOH HOH . H 4 HOH A 79 379 65 HOH HOH . H 4 HOH A 80 380 94 HOH HOH . H 4 HOH A 81 381 104 HOH HOH . H 4 HOH A 82 382 21 HOH HOH . H 4 HOH A 83 383 96 HOH HOH . H 4 HOH A 84 384 28 HOH HOH . H 4 HOH A 85 385 13 HOH HOH . H 4 HOH A 86 386 58 HOH HOH . H 4 HOH A 87 387 23 HOH HOH . H 4 HOH A 88 388 93 HOH HOH . H 4 HOH A 89 389 61 HOH HOH . H 4 HOH A 90 390 42 HOH HOH . H 4 HOH A 91 391 52 HOH HOH . H 4 HOH A 92 392 105 HOH HOH . H 4 HOH A 93 393 107 HOH HOH . H 4 HOH A 94 394 103 HOH HOH . H 4 HOH A 95 395 90 HOH HOH . H 4 HOH A 96 396 84 HOH HOH . H 4 HOH A 97 397 99 HOH HOH . H 4 HOH A 98 398 63 HOH HOH . H 4 HOH A 99 399 69 HOH HOH . H 4 HOH A 100 400 83 HOH HOH . H 4 HOH A 101 401 101 HOH HOH . H 4 HOH A 102 402 74 HOH HOH . H 4 HOH A 103 403 98 HOH HOH . H 4 HOH A 104 404 33 HOH HOH . H 4 HOH A 105 405 109 HOH HOH . H 4 HOH A 106 406 95 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -7.531 _atom_site.Cartn_y 23.197 _atom_site.Cartn_z -44.104 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.16 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 203 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #