data_5JKW # _model_server_result.job_id sHeTGkjokbtt3srGBhvzdg _model_server_result.datetime_utc '2024-11-30 01:33:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jkw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 5JKW # _exptl.entry_id 5JKW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 288.424 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TESTOSTERONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5JKW _cell.length_a 140.523 _cell.length_b 140.523 _cell.length_c 118.471 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JKW _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 437 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 437 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 600 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.419 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H28 O2' _chem_comp.formula_weight 288.424 _chem_comp.id TES _chem_comp.mon_nstd_flag . _chem_comp.name TESTOSTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 TES sing 372 n n C1 C10 TES sing 373 n n C1 H11 TES sing 374 n n C1 H12 TES sing 375 n n C2 C3 TES sing 376 n n C2 H21 TES sing 377 n n C2 H22 TES sing 378 n n C3 O3 TES doub 379 n n C3 C4 TES sing 380 n n C4 C5 TES doub 381 n n C4 H4 TES sing 382 n n C5 C6 TES sing 383 n n C5 C10 TES sing 384 n n C6 C7 TES sing 385 n n C6 H61 TES sing 386 n n C6 H62 TES sing 387 n n C7 C8 TES sing 388 n n C7 H71 TES sing 389 n n C7 H72 TES sing 390 n n C8 C9 TES sing 391 n n C8 C14 TES sing 392 n n C8 H8 TES sing 393 n n C9 C10 TES sing 394 n n C9 C11 TES sing 395 n n C9 H9 TES sing 396 n n C10 C19 TES sing 397 n n C11 C12 TES sing 398 n n C11 H111 TES sing 399 n n C11 H112 TES sing 400 n n C12 C13 TES sing 401 n n C12 H121 TES sing 402 n n C12 H122 TES sing 403 n n C13 C14 TES sing 404 n n C13 C17 TES sing 405 n n C13 C18 TES sing 406 n n C14 C15 TES sing 407 n n C14 H14 TES sing 408 n n C15 C16 TES sing 409 n n C15 H151 TES sing 410 n n C15 H152 TES sing 411 n n C16 C17 TES sing 412 n n C16 H161 TES sing 413 n n C16 H162 TES sing 414 n n C17 O17 TES sing 415 n n C17 H17 TES sing 416 n n O17 HO7 TES sing 417 n n C18 H181 TES sing 418 n n C18 H182 TES sing 419 n n C18 H183 TES sing 420 n n C19 H191 TES sing 421 n n C19 H192 TES sing 422 n n C19 H193 TES sing 423 n n # _atom_sites.entry_id 5JKW _atom_sites.fract_transf_matrix[1][1] 0.007116 _atom_sites.fract_transf_matrix[1][2] 0.004109 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008217 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008441 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 600 600 HEM HEM . C 3 TES A 1 601 601 TES TES . D 4 HOH A 1 701 4 HOH HOH . D 4 HOH A 2 702 1 HOH HOH . D 4 HOH A 3 703 2 HOH HOH . D 4 HOH A 4 704 3 HOH HOH . D 4 HOH A 5 705 7 HOH HOH . D 4 HOH A 6 706 6 HOH HOH . D 4 HOH A 7 707 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TES . . . C 3 87.362 51.946 45.541 1 64.34 ? C1 TES 601 A 1 HETATM 2 C C2 TES . . . C 3 87.645 50.605 46.191 1 63.25 ? C2 TES 601 A 1 HETATM 3 C C3 TES . . . C 3 87.559 50.737 47.684 1 65.43 ? C3 TES 601 A 1 HETATM 4 O O3 TES . . . C 3 88.302 50.074 48.383 1 70.57 ? O3 TES 601 A 1 HETATM 5 C C4 TES . . . C 3 86.616 51.696 48.288 1 62.61 ? C4 TES 601 A 1 HETATM 6 C C5 TES . . . C 3 85.904 52.544 47.524 1 62.75 ? C5 TES 601 A 1 HETATM 7 C C6 TES . . . C 3 84.846 53.401 48.189 1 63.58 ? C6 TES 601 A 1 HETATM 8 C C7 TES . . . C 3 85.037 54.863 47.816 1 63.97 ? C7 TES 601 A 1 HETATM 9 C C8 TES . . . C 3 85.115 55.031 46.306 1 63.66 ? C8 TES 601 A 1 HETATM 10 C C9 TES . . . C 3 86.258 54.183 45.732 1 63.41 ? C9 TES 601 A 1 HETATM 11 C C10 TES . . . C 3 86.1 52.67 46.022 1 63.46 ? C10 TES 601 A 1 HETATM 12 C C11 TES . . . C 3 86.524 54.516 44.252 1 63.94 ? C11 TES 601 A 1 HETATM 13 C C12 TES . . . C 3 86.696 56.01 43.995 1 64.51 ? C12 TES 601 A 1 HETATM 14 C C13 TES . . . C 3 85.515 56.8 44.524 1 62.37 ? C13 TES 601 A 1 HETATM 15 C C14 TES . . . C 3 85.364 56.498 45.995 1 62.69 ? C14 TES 601 A 1 HETATM 16 C C15 TES . . . C 3 84.363 57.543 46.466 1 62.77 ? C15 TES 601 A 1 HETATM 17 C C16 TES . . . C 3 84.751 58.792 45.669 1 61.77 ? C16 TES 601 A 1 HETATM 18 C C17 TES . . . C 3 85.756 58.302 44.622 1 63.49 ? C17 TES 601 A 1 HETATM 19 O O17 TES . . . C 3 85.689 59.005 43.378 1 64.07 ? O17 TES 601 A 1 HETATM 20 C C18 TES . . . C 3 84.263 56.506 43.691 1 60.09 ? C18 TES 601 A 1 HETATM 21 C C19 TES . . . C 3 84.903 52.048 45.316 1 63.72 ? C19 TES 601 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #