data_5JL9 # _model_server_result.job_id LNZDzdGvEkGV9IPiaYv-5w _model_server_result.datetime_utc '2024-11-04 23:03:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jl9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 5JL9 # _exptl.entry_id 5JL9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 286.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-ANDROSTENE-3-17-DIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5JL9 _cell.length_a 140.016 _cell.length_b 140.016 _cell.length_c 119.379 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JL9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 437 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 437 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 600 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.407 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H26 O2' _chem_comp.formula_weight 286.409 _chem_comp.id ASD _chem_comp.mon_nstd_flag . _chem_comp.name 4-ANDROSTENE-3-17-DIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C10 ASD sing 39 n n C1 C2 ASD sing 40 n n C1 H11 ASD sing 41 n n C1 H12 ASD sing 42 n n C10 C19 ASD sing 43 n n C10 C5 ASD sing 44 n n C10 C9 ASD sing 45 n n C11 C12 ASD sing 46 n n C11 C9 ASD sing 47 n n C11 H111 ASD sing 48 n n C11 H112 ASD sing 49 n n C12 C13 ASD sing 50 n n C12 H121 ASD sing 51 n n C12 H122 ASD sing 52 n n C13 C14 ASD sing 53 n n C13 C17 ASD sing 54 n n C13 C18 ASD sing 55 n n C14 C15 ASD sing 56 n n C14 C8 ASD sing 57 n n C14 H14 ASD sing 58 n n C15 C16 ASD sing 59 n n C15 H151 ASD sing 60 n n C15 H152 ASD sing 61 n n C16 C17 ASD sing 62 n n C16 H161 ASD sing 63 n n C16 H162 ASD sing 64 n n C17 O2 ASD doub 65 n n C18 H181 ASD sing 66 n n C18 H182 ASD sing 67 n n C18 H183 ASD sing 68 n n C19 H191 ASD sing 69 n n C19 H192 ASD sing 70 n n C19 H193 ASD sing 71 n n C2 C3 ASD sing 72 n n C2 H21 ASD sing 73 n n C2 H22 ASD sing 74 n n C3 C4 ASD sing 75 n n C3 O1 ASD doub 76 n n C4 C5 ASD doub 77 n n C4 H4 ASD sing 78 n n C5 C6 ASD sing 79 n n C6 C7 ASD sing 80 n n C6 H61 ASD sing 81 n n C6 H62 ASD sing 82 n n C7 C8 ASD sing 83 n n C7 H71 ASD sing 84 n n C7 H72 ASD sing 85 n n C8 C9 ASD sing 86 n n C8 H8 ASD sing 87 n n C9 H9 ASD sing 88 n n # _atom_sites.entry_id 5JL9 _atom_sites.fract_transf_matrix[1][1] 0.007142 _atom_sites.fract_transf_matrix[1][2] 0.004123 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008247 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008377 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 600 600 HEM HEM . C 3 ASD A 1 601 601 ASD ASD . D 4 HOH A 1 701 4 HOH HOH . D 4 HOH A 2 702 3 HOH HOH . D 4 HOH A 3 703 2 HOH HOH . D 4 HOH A 4 704 7 HOH HOH . D 4 HOH A 5 705 1 HOH HOH . D 4 HOH A 6 706 6 HOH HOH . D 4 HOH A 7 707 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ASD . . . C 3 87.165 51.694 45.728 1 79.58 ? C1 ASD 601 A 1 HETATM 2 C C10 ASD . . . C 3 85.879 52.397 46.193 1 80.22 ? C10 ASD 601 A 1 HETATM 3 C C11 ASD . . . C 3 86.313 54.284 44.453 1 80.28 ? C11 ASD 601 A 1 HETATM 4 C C12 ASD . . . C 3 86.393 55.788 44.164 1 80.65 ? C12 ASD 601 A 1 HETATM 5 C C13 ASD . . . C 3 85.171 56.499 44.715 1 77.43 ? C13 ASD 601 A 1 HETATM 6 C C14 ASD . . . C 3 85.154 56.222 46.204 1 77.14 ? C14 ASD 601 A 1 HETATM 7 C C15 ASD . . . C 3 84.193 57.259 46.768 1 77.44 ? C15 ASD 601 A 1 HETATM 8 C C16 ASD . . . C 3 84.526 58.534 46.001 1 75.55 ? C16 ASD 601 A 1 HETATM 9 C C17 ASD . . . C 3 85.182 58.001 44.754 1 76.78 ? C17 ASD 601 A 1 HETATM 10 C C18 ASD . . . C 3 83.913 56.123 43.936 1 75.65 ? C18 ASD 601 A 1 HETATM 11 C C19 ASD . . . C 3 84.686 51.78 45.488 1 81.18 ? C19 ASD 601 A 1 HETATM 12 C C2 ASD . . . C 3 87.461 50.342 46.349 1 74.84 ? C2 ASD 601 A 1 HETATM 13 C C3 ASD . . . C 3 87.364 50.436 47.837 1 78.49 ? C3 ASD 601 A 1 HETATM 14 C C4 ASD . . . C 3 86.383 51.361 48.439 1 81.23 ? C4 ASD 601 A 1 HETATM 15 C C5 ASD . . . C 3 85.68 52.232 47.685 1 78.98 ? C5 ASD 601 A 1 HETATM 16 C C6 ASD . . . C 3 84.64 53.093 48.353 1 78.66 ? C6 ASD 601 A 1 HETATM 17 C C7 ASD . . . C 3 84.898 54.552 48.031 1 77.95 ? C7 ASD 601 A 1 HETATM 18 C C8 ASD . . . C 3 84.916 54.763 46.529 1 77.15 ? C8 ASD 601 A 1 HETATM 19 C C9 ASD . . . C 3 86.046 53.924 45.93 1 79.55 ? C9 ASD 601 A 1 HETATM 20 O O1 ASD . . . C 3 88.121 49.786 48.534 1 83.51 ? O1 ASD 601 A 1 HETATM 21 O O2 ASD . . . C 3 85.65 58.715 43.883 1 79.39 ? O2 ASD 601 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #