data_5JLI # _model_server_result.job_id kjiWrTnuqGA-uibCiQtpjw _model_server_result.datetime_utc '2024-11-07 17:27:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jli # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5JLI # _exptl.entry_id 5JLI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5JLI _cell.length_a 53.629 _cell.length_b 53.629 _cell.length_c 180.523 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JLI _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 26.8145 46.444076 30.087167 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PCA 1 A PCA 1 1_555 A N PHE 2 A PHE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A SG CYS 116 A CYS 116 1_555 B CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? covale ? covale3 A SG CYS 119 A CYS 119 1_555 B CAC HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.802 ? metalc ? metalc1 A NE2 HIS 120 A HIS 120 1_555 B FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc2 B FE HEC . A HEC 201 1_555 F N NO . A NO 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.811 ? metalc ? metalc3 B FE HEC . A HEC 201 1_555 F O NO . A NO 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 411 n n S O2 SO4 doub 412 n n S O3 SO4 sing 413 n n S O4 SO4 sing 414 n n # _atom_sites.entry_id 5JLI _atom_sites.fract_transf_matrix[1][1] 0.018647 _atom_sites.fract_transf_matrix[1][2] 0.010766 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021531 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005539 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 201 128 HEC MEH . C 3 ASC A 1 202 130 ASC ASC . D 4 SO4 A 1 203 1 SO4 SO4 . E 4 SO4 A 1 204 2 SO4 SO4 . F 5 NO A 1 205 1 NO No . G 6 HOH A 1 301 78 HOH HOH . G 6 HOH A 2 302 125 HOH HOH . G 6 HOH A 3 303 66 HOH HOH . G 6 HOH A 4 304 18 HOH HOH . G 6 HOH A 5 305 61 HOH HOH . G 6 HOH A 6 306 36 HOH HOH . G 6 HOH A 7 307 63 HOH HOH . G 6 HOH A 8 308 46 HOH HOH . G 6 HOH A 9 309 89 HOH HOH . G 6 HOH A 10 310 145 HOH HOH . G 6 HOH A 11 311 57 HOH HOH . G 6 HOH A 12 312 127 HOH HOH . G 6 HOH A 13 313 40 HOH HOH . G 6 HOH A 14 314 30 HOH HOH . G 6 HOH A 15 315 101 HOH HOH . G 6 HOH A 16 316 60 HOH HOH . G 6 HOH A 17 317 51 HOH HOH . G 6 HOH A 18 318 140 HOH HOH . G 6 HOH A 19 319 44 HOH HOH . G 6 HOH A 20 320 99 HOH HOH . G 6 HOH A 21 321 68 HOH HOH . G 6 HOH A 22 322 118 HOH HOH . G 6 HOH A 23 323 45 HOH HOH . G 6 HOH A 24 324 32 HOH HOH . G 6 HOH A 25 325 50 HOH HOH . G 6 HOH A 26 326 28 HOH HOH . G 6 HOH A 27 327 141 HOH HOH . G 6 HOH A 28 328 138 HOH HOH . G 6 HOH A 29 329 14 HOH HOH . G 6 HOH A 30 330 132 HOH HOH . G 6 HOH A 31 331 126 HOH HOH . G 6 HOH A 32 332 117 HOH HOH . G 6 HOH A 33 333 3 HOH HOH . G 6 HOH A 34 334 39 HOH HOH . G 6 HOH A 35 335 20 HOH HOH . G 6 HOH A 36 336 70 HOH HOH . G 6 HOH A 37 337 64 HOH HOH . G 6 HOH A 38 338 4 HOH HOH . G 6 HOH A 39 339 111 HOH HOH . G 6 HOH A 40 340 33 HOH HOH . G 6 HOH A 41 341 11 HOH HOH . G 6 HOH A 42 342 7 HOH HOH . G 6 HOH A 43 343 42 HOH HOH . G 6 HOH A 44 344 143 HOH HOH . G 6 HOH A 45 345 106 HOH HOH . G 6 HOH A 46 346 35 HOH HOH . G 6 HOH A 47 347 71 HOH HOH . G 6 HOH A 48 348 65 HOH HOH . G 6 HOH A 49 349 122 HOH HOH . G 6 HOH A 50 350 110 HOH HOH . G 6 HOH A 51 351 139 HOH HOH . G 6 HOH A 52 352 77 HOH HOH . G 6 HOH A 53 353 69 HOH HOH . G 6 HOH A 54 354 108 HOH HOH . G 6 HOH A 55 355 58 HOH HOH . G 6 HOH A 56 356 124 HOH HOH . G 6 HOH A 57 357 9 HOH HOH . G 6 HOH A 58 358 21 HOH HOH . G 6 HOH A 59 359 17 HOH HOH . G 6 HOH A 60 360 22 HOH HOH . G 6 HOH A 61 361 38 HOH HOH . G 6 HOH A 62 362 5 HOH HOH . G 6 HOH A 63 363 137 HOH HOH . G 6 HOH A 64 364 73 HOH HOH . G 6 HOH A 65 365 49 HOH HOH . G 6 HOH A 66 366 29 HOH HOH . G 6 HOH A 67 367 37 HOH HOH . G 6 HOH A 68 368 53 HOH HOH . G 6 HOH A 69 369 144 HOH HOH . G 6 HOH A 70 370 8 HOH HOH . G 6 HOH A 71 371 75 HOH HOH . G 6 HOH A 72 372 15 HOH HOH . G 6 HOH A 73 373 34 HOH HOH . G 6 HOH A 74 374 74 HOH HOH . G 6 HOH A 75 375 6 HOH HOH . G 6 HOH A 76 376 2 HOH HOH . G 6 HOH A 77 377 55 HOH HOH . G 6 HOH A 78 378 128 HOH HOH . G 6 HOH A 79 379 16 HOH HOH . G 6 HOH A 80 380 13 HOH HOH . G 6 HOH A 81 381 119 HOH HOH . G 6 HOH A 82 382 47 HOH HOH . G 6 HOH A 83 383 12 HOH HOH . G 6 HOH A 84 384 148 HOH HOH . G 6 HOH A 85 385 27 HOH HOH . G 6 HOH A 86 386 54 HOH HOH . G 6 HOH A 87 387 56 HOH HOH . G 6 HOH A 88 388 59 HOH HOH . G 6 HOH A 89 389 26 HOH HOH . G 6 HOH A 90 390 67 HOH HOH . G 6 HOH A 91 391 85 HOH HOH . G 6 HOH A 92 392 134 HOH HOH . G 6 HOH A 93 393 84 HOH HOH . G 6 HOH A 94 394 19 HOH HOH . G 6 HOH A 95 395 10 HOH HOH . G 6 HOH A 96 396 24 HOH HOH . G 6 HOH A 97 397 121 HOH HOH . G 6 HOH A 98 398 114 HOH HOH . G 6 HOH A 99 399 123 HOH HOH . G 6 HOH A 100 400 82 HOH HOH . G 6 HOH A 101 401 103 HOH HOH . G 6 HOH A 102 402 52 HOH HOH . G 6 HOH A 103 403 80 HOH HOH . G 6 HOH A 104 404 87 HOH HOH . G 6 HOH A 105 405 79 HOH HOH . G 6 HOH A 106 406 48 HOH HOH . G 6 HOH A 107 407 129 HOH HOH . G 6 HOH A 108 408 112 HOH HOH . G 6 HOH A 109 409 120 HOH HOH . G 6 HOH A 110 410 43 HOH HOH . G 6 HOH A 111 411 72 HOH HOH . G 6 HOH A 112 412 102 HOH HOH . G 6 HOH A 113 413 107 HOH HOH . G 6 HOH A 114 414 83 HOH HOH . G 6 HOH A 115 415 41 HOH HOH . G 6 HOH A 116 416 91 HOH HOH . G 6 HOH A 117 417 135 HOH HOH . G 6 HOH A 118 418 62 HOH HOH . G 6 HOH A 119 419 100 HOH HOH . G 6 HOH A 120 420 31 HOH HOH . G 6 HOH A 121 421 88 HOH HOH . G 6 HOH A 122 422 147 HOH HOH . G 6 HOH A 123 423 86 HOH HOH . G 6 HOH A 124 424 25 HOH HOH . G 6 HOH A 125 425 76 HOH HOH . G 6 HOH A 126 426 113 HOH HOH . G 6 HOH A 127 427 104 HOH HOH . G 6 HOH A 128 428 81 HOH HOH . G 6 HOH A 129 429 93 HOH HOH . G 6 HOH A 130 430 131 HOH HOH . G 6 HOH A 131 431 130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 4 11.32 39.806 17.05 1 28.42 ? S SO4 203 A 1 HETATM 2 O O1 SO4 . . . D 4 11.741 38.373 17.119 1 31.36 ? O1 SO4 203 A 1 HETATM 3 O O2 SO4 . . . D 4 10.823 40.212 15.694 1 30.85 ? O2 SO4 203 A 1 HETATM 4 O O3 SO4 . . . D 4 12.457 40.708 17.329 1 32.81 ? O3 SO4 203 A 1 HETATM 5 O O4 SO4 . . . D 4 10.222 39.994 18.031 1 28.73 ? O4 SO4 203 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #