data_5JNT # _model_server_result.job_id C9BSSJpfzi3y75ZAU7QgTw _model_server_result.datetime_utc '2024-11-21 17:41:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jnt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5JNT # _exptl.entry_id 5JNT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JNT _cell.length_a 33.905 _cell.length_b 55.018 _cell.length_c 96.423 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JNT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 236 n n O1 C6 MES sing 237 n n C2 C3 MES sing 238 n n C2 H21 MES sing 239 n n C2 H22 MES sing 240 n n C3 N4 MES sing 241 n n C3 H31 MES sing 242 n n C3 H32 MES sing 243 n n N4 C5 MES sing 244 n n N4 C7 MES sing 245 n n N4 HN4 MES sing 246 n n C5 C6 MES sing 247 n n C5 H51 MES sing 248 n n C5 H52 MES sing 249 n n C6 H61 MES sing 250 n n C6 H62 MES sing 251 n n C7 C8 MES sing 252 n n C7 H71 MES sing 253 n n C7 H72 MES sing 254 n n C8 S MES sing 255 n n C8 H81 MES sing 256 n n C8 H82 MES sing 257 n n S O1S MES doub 258 n n S O2S MES doub 259 n n S O3S MES sing 260 n n # _atom_sites.entry_id 5JNT _atom_sites.fract_transf_matrix[1][1] 0.029494 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018176 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010371 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MES A 1 201 160 MES MES . C 3 DMS A 1 202 161 DMS DMS . D 4 EDO A 1 203 162 EDO EDO . E 4 EDO A 1 204 163 EDO EDO . F 5 HOH A 1 301 204 HOH HOH . F 5 HOH A 2 302 120 HOH HOH . F 5 HOH A 3 303 270 HOH HOH . F 5 HOH A 4 304 79 HOH HOH . F 5 HOH A 5 305 78 HOH HOH . F 5 HOH A 6 306 274 HOH HOH . F 5 HOH A 7 307 28 HOH HOH . F 5 HOH A 8 308 235 HOH HOH . F 5 HOH A 9 309 115 HOH HOH . F 5 HOH A 10 310 137 HOH HOH . F 5 HOH A 11 311 143 HOH HOH . F 5 HOH A 12 312 90 HOH HOH . F 5 HOH A 13 313 169 HOH HOH . F 5 HOH A 14 314 40 HOH HOH . F 5 HOH A 15 315 258 HOH HOH . F 5 HOH A 16 316 13 HOH HOH . F 5 HOH A 17 317 238 HOH HOH . F 5 HOH A 18 318 261 HOH HOH . F 5 HOH A 19 319 272 HOH HOH . F 5 HOH A 20 320 228 HOH HOH . F 5 HOH A 21 321 129 HOH HOH . F 5 HOH A 22 322 45 HOH HOH . F 5 HOH A 23 323 74 HOH HOH . F 5 HOH A 24 324 200 HOH HOH . F 5 HOH A 25 325 103 HOH HOH . F 5 HOH A 26 326 54 HOH HOH . F 5 HOH A 27 327 22 HOH HOH . F 5 HOH A 28 328 41 HOH HOH . F 5 HOH A 29 329 166 HOH HOH . F 5 HOH A 30 330 110 HOH HOH . F 5 HOH A 31 331 21 HOH HOH . F 5 HOH A 32 332 229 HOH HOH . F 5 HOH A 33 333 125 HOH HOH . F 5 HOH A 34 334 5 HOH HOH . F 5 HOH A 35 335 105 HOH HOH . F 5 HOH A 36 336 25 HOH HOH . F 5 HOH A 37 337 35 HOH HOH . F 5 HOH A 38 338 82 HOH HOH . F 5 HOH A 39 339 19 HOH HOH . F 5 HOH A 40 340 262 HOH HOH . F 5 HOH A 41 341 210 HOH HOH . F 5 HOH A 42 342 72 HOH HOH . F 5 HOH A 43 343 1 HOH HOH . F 5 HOH A 44 344 89 HOH HOH . F 5 HOH A 45 345 65 HOH HOH . F 5 HOH A 46 346 56 HOH HOH . F 5 HOH A 47 347 26 HOH HOH . F 5 HOH A 48 348 43 HOH HOH . F 5 HOH A 49 349 237 HOH HOH . F 5 HOH A 50 350 206 HOH HOH . F 5 HOH A 51 351 96 HOH HOH . F 5 HOH A 52 352 264 HOH HOH . F 5 HOH A 53 353 243 HOH HOH . F 5 HOH A 54 354 73 HOH HOH . F 5 HOH A 55 355 68 HOH HOH . F 5 HOH A 56 356 69 HOH HOH . F 5 HOH A 57 357 140 HOH HOH . F 5 HOH A 58 358 17 HOH HOH . F 5 HOH A 59 359 106 HOH HOH . F 5 HOH A 60 360 153 HOH HOH . F 5 HOH A 61 361 131 HOH HOH . F 5 HOH A 62 362 114 HOH HOH . F 5 HOH A 63 363 175 HOH HOH . F 5 HOH A 64 364 50 HOH HOH . F 5 HOH A 65 365 124 HOH HOH . F 5 HOH A 66 366 156 HOH HOH . F 5 HOH A 67 367 119 HOH HOH . F 5 HOH A 68 368 128 HOH HOH . F 5 HOH A 69 369 9 HOH HOH . F 5 HOH A 70 370 29 HOH HOH . F 5 HOH A 71 371 163 HOH HOH . F 5 HOH A 72 372 219 HOH HOH . F 5 HOH A 73 373 188 HOH HOH . F 5 HOH A 74 374 32 HOH HOH . F 5 HOH A 75 375 81 HOH HOH . F 5 HOH A 76 376 154 HOH HOH . F 5 HOH A 77 377 10 HOH HOH . F 5 HOH A 78 378 259 HOH HOH . F 5 HOH A 79 379 102 HOH HOH . F 5 HOH A 80 380 44 HOH HOH . F 5 HOH A 81 381 230 HOH HOH . F 5 HOH A 82 382 244 HOH HOH . F 5 HOH A 83 383 165 HOH HOH . F 5 HOH A 84 384 34 HOH HOH . F 5 HOH A 85 385 64 HOH HOH . F 5 HOH A 86 386 172 HOH HOH . F 5 HOH A 87 387 46 HOH HOH . F 5 HOH A 88 388 135 HOH HOH . F 5 HOH A 89 389 24 HOH HOH . F 5 HOH A 90 390 31 HOH HOH . F 5 HOH A 91 391 58 HOH HOH . F 5 HOH A 92 392 226 HOH HOH . F 5 HOH A 93 393 186 HOH HOH . F 5 HOH A 94 394 27 HOH HOH . F 5 HOH A 95 395 57 HOH HOH . F 5 HOH A 96 396 16 HOH HOH . F 5 HOH A 97 397 39 HOH HOH . F 5 HOH A 98 398 6 HOH HOH . F 5 HOH A 99 399 112 HOH HOH . F 5 HOH A 100 400 55 HOH HOH . F 5 HOH A 101 401 136 HOH HOH . F 5 HOH A 102 402 67 HOH HOH . F 5 HOH A 103 403 97 HOH HOH . F 5 HOH A 104 404 91 HOH HOH . F 5 HOH A 105 405 242 HOH HOH . F 5 HOH A 106 406 75 HOH HOH . F 5 HOH A 107 407 42 HOH HOH . F 5 HOH A 108 408 14 HOH HOH . F 5 HOH A 109 409 4 HOH HOH . F 5 HOH A 110 410 234 HOH HOH . F 5 HOH A 111 411 126 HOH HOH . F 5 HOH A 112 412 62 HOH HOH . F 5 HOH A 113 413 94 HOH HOH . F 5 HOH A 114 414 148 HOH HOH . F 5 HOH A 115 415 7 HOH HOH . F 5 HOH A 116 416 18 HOH HOH . F 5 HOH A 117 417 133 HOH HOH . F 5 HOH A 118 418 201 HOH HOH . F 5 HOH A 119 419 118 HOH HOH . F 5 HOH A 120 420 231 HOH HOH . F 5 HOH A 121 421 232 HOH HOH . F 5 HOH A 122 422 227 HOH HOH . F 5 HOH A 123 423 147 HOH HOH . F 5 HOH A 124 424 30 HOH HOH . F 5 HOH A 125 425 241 HOH HOH . F 5 HOH A 126 426 53 HOH HOH . F 5 HOH A 127 427 122 HOH HOH . F 5 HOH A 128 428 2 HOH HOH . F 5 HOH A 129 429 66 HOH HOH . F 5 HOH A 130 430 98 HOH HOH . F 5 HOH A 131 431 207 HOH HOH . F 5 HOH A 132 432 51 HOH HOH . F 5 HOH A 133 433 87 HOH HOH . F 5 HOH A 134 434 146 HOH HOH . F 5 HOH A 135 435 92 HOH HOH . F 5 HOH A 136 436 183 HOH HOH . F 5 HOH A 137 437 144 HOH HOH . F 5 HOH A 138 438 70 HOH HOH . F 5 HOH A 139 439 95 HOH HOH . F 5 HOH A 140 440 59 HOH HOH . F 5 HOH A 141 441 111 HOH HOH . F 5 HOH A 142 442 23 HOH HOH . F 5 HOH A 143 443 149 HOH HOH . F 5 HOH A 144 444 174 HOH HOH . F 5 HOH A 145 445 47 HOH HOH . F 5 HOH A 146 446 222 HOH HOH . F 5 HOH A 147 447 20 HOH HOH . F 5 HOH A 148 448 130 HOH HOH . F 5 HOH A 149 449 3 HOH HOH . F 5 HOH A 150 450 71 HOH HOH . F 5 HOH A 151 451 267 HOH HOH . F 5 HOH A 152 452 236 HOH HOH . F 5 HOH A 153 453 8 HOH HOH . F 5 HOH A 154 454 11 HOH HOH . F 5 HOH A 155 455 36 HOH HOH . F 5 HOH A 156 456 257 HOH HOH . F 5 HOH A 157 457 176 HOH HOH . F 5 HOH A 158 458 117 HOH HOH . F 5 HOH A 159 459 52 HOH HOH . F 5 HOH A 160 460 76 HOH HOH . F 5 HOH A 161 461 158 HOH HOH . F 5 HOH A 162 462 239 HOH HOH . F 5 HOH A 163 463 199 HOH HOH . F 5 HOH A 164 464 157 HOH HOH . F 5 HOH A 165 465 132 HOH HOH . F 5 HOH A 166 466 38 HOH HOH . F 5 HOH A 167 467 250 HOH HOH . F 5 HOH A 168 468 225 HOH HOH . F 5 HOH A 169 469 145 HOH HOH . F 5 HOH A 170 470 15 HOH HOH . F 5 HOH A 171 471 88 HOH HOH . F 5 HOH A 172 472 61 HOH HOH . F 5 HOH A 173 473 127 HOH HOH . F 5 HOH A 174 474 178 HOH HOH . F 5 HOH A 175 475 221 HOH HOH . F 5 HOH A 176 476 256 HOH HOH . F 5 HOH A 177 477 240 HOH HOH . F 5 HOH A 178 478 33 HOH HOH . F 5 HOH A 179 479 202 HOH HOH . F 5 HOH A 180 480 84 HOH HOH . F 5 HOH A 181 481 138 HOH HOH . F 5 HOH A 182 482 197 HOH HOH . F 5 HOH A 183 483 224 HOH HOH . F 5 HOH A 184 484 205 HOH HOH . F 5 HOH A 185 485 181 HOH HOH . F 5 HOH A 186 486 83 HOH HOH . F 5 HOH A 187 487 263 HOH HOH . F 5 HOH A 188 488 177 HOH HOH . F 5 HOH A 189 489 189 HOH HOH . F 5 HOH A 190 490 113 HOH HOH . F 5 HOH A 191 491 254 HOH HOH . F 5 HOH A 192 492 275 HOH HOH . F 5 HOH A 193 493 211 HOH HOH . F 5 HOH A 194 494 93 HOH HOH . F 5 HOH A 195 495 190 HOH HOH . F 5 HOH A 196 496 191 HOH HOH . F 5 HOH A 197 497 194 HOH HOH . F 5 HOH A 198 498 247 HOH HOH . F 5 HOH A 199 499 246 HOH HOH . F 5 HOH A 200 500 184 HOH HOH . F 5 HOH A 201 501 269 HOH HOH . F 5 HOH A 202 502 37 HOH HOH . F 5 HOH A 203 503 252 HOH HOH . F 5 HOH A 204 504 217 HOH HOH . F 5 HOH A 205 505 160 HOH HOH . F 5 HOH A 206 506 233 HOH HOH . F 5 HOH A 207 507 80 HOH HOH . F 5 HOH A 208 508 100 HOH HOH . F 5 HOH A 209 509 101 HOH HOH . F 5 HOH A 210 510 253 HOH HOH . F 5 HOH A 211 511 196 HOH HOH . F 5 HOH A 212 512 218 HOH HOH . F 5 HOH A 213 513 48 HOH HOH . F 5 HOH A 214 514 104 HOH HOH . F 5 HOH A 215 515 179 HOH HOH . F 5 HOH A 216 516 116 HOH HOH . F 5 HOH A 217 517 108 HOH HOH . F 5 HOH A 218 518 198 HOH HOH . F 5 HOH A 219 519 268 HOH HOH . F 5 HOH A 220 520 155 HOH HOH . F 5 HOH A 221 521 209 HOH HOH . F 5 HOH A 222 522 248 HOH HOH . F 5 HOH A 223 523 271 HOH HOH . F 5 HOH A 224 524 220 HOH HOH . F 5 HOH A 225 525 86 HOH HOH . F 5 HOH A 226 526 266 HOH HOH . F 5 HOH A 227 527 63 HOH HOH . F 5 HOH A 228 528 168 HOH HOH . F 5 HOH A 229 529 273 HOH HOH . F 5 HOH A 230 530 12 HOH HOH . F 5 HOH A 231 531 134 HOH HOH . F 5 HOH A 232 532 193 HOH HOH . F 5 HOH A 233 533 162 HOH HOH . F 5 HOH A 234 534 173 HOH HOH . F 5 HOH A 235 535 164 HOH HOH . F 5 HOH A 236 536 212 HOH HOH . F 5 HOH A 237 537 60 HOH HOH . F 5 HOH A 238 538 109 HOH HOH . F 5 HOH A 239 539 260 HOH HOH . F 5 HOH A 240 540 265 HOH HOH . F 5 HOH A 241 541 182 HOH HOH . F 5 HOH A 242 542 139 HOH HOH . F 5 HOH A 243 543 255 HOH HOH . F 5 HOH A 244 544 77 HOH HOH . F 5 HOH A 245 545 49 HOH HOH . F 5 HOH A 246 546 123 HOH HOH . F 5 HOH A 247 547 215 HOH HOH . F 5 HOH A 248 548 180 HOH HOH . F 5 HOH A 249 549 208 HOH HOH . F 5 HOH A 250 550 99 HOH HOH . F 5 HOH A 251 551 161 HOH HOH . F 5 HOH A 252 552 249 HOH HOH . F 5 HOH A 253 553 245 HOH HOH . F 5 HOH A 254 554 152 HOH HOH . F 5 HOH A 255 555 107 HOH HOH . F 5 HOH A 256 556 185 HOH HOH . F 5 HOH A 257 557 142 HOH HOH . F 5 HOH A 258 558 187 HOH HOH . F 5 HOH A 259 559 171 HOH HOH . F 5 HOH A 260 560 223 HOH HOH . F 5 HOH A 261 561 167 HOH HOH . F 5 HOH A 262 562 203 HOH HOH . F 5 HOH A 263 563 159 HOH HOH . F 5 HOH A 264 564 85 HOH HOH . F 5 HOH A 265 565 151 HOH HOH . F 5 HOH A 266 566 121 HOH HOH . F 5 HOH A 267 567 213 HOH HOH . F 5 HOH A 268 568 195 HOH HOH . F 5 HOH A 269 569 214 HOH HOH . F 5 HOH A 270 570 216 HOH HOH . F 5 HOH A 271 571 150 HOH HOH . F 5 HOH A 272 572 251 HOH HOH . F 5 HOH A 273 573 141 HOH HOH . F 5 HOH A 274 574 192 HOH HOH . F 5 HOH A 275 575 170 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . B 2 -2.702 13.997 2.975 1 14.29 ? O1 MES 201 A 1 HETATM 2 C C2 MES . . . B 2 -4.024 13.983 2.536 1 12.65 ? C2 MES 201 A 1 HETATM 3 C C3 MES . . . B 2 -4.042 13.293 1.238 1 12.87 ? C3 MES 201 A 1 HETATM 4 N N4 MES . . . B 2 -3.583 11.94 1.309 1 10.85 ? N4 MES 201 A 1 HETATM 5 C C5 MES . . . B 2 -2.253 11.955 1.815 1 13.47 ? C5 MES 201 A 1 HETATM 6 C C6 MES . . . B 2 -2.134 12.715 3.058 1 14.93 ? C6 MES 201 A 1 HETATM 7 C C7 MES . . . B 2 -3.625 11.279 0.013 1 10.8 ? C7 MES 201 A 1 HETATM 8 C C8 MES . . . B 2 -3.432 9.725 -0.064 1 9.99 ? C8 MES 201 A 1 HETATM 9 S S MES . . . B 2 -3.373 9.189 -1.671 1 9.38 ? S MES 201 A 1 HETATM 10 O O1S MES . . . B 2 -2.095 9.773 -2.226 1 9.09 ? O1S MES 201 A 1 HETATM 11 O O2S MES . . . B 2 -4.565 9.732 -2.328 1 9.39 ? O2S MES 201 A 1 HETATM 12 O O3S MES . . . B 2 -3.385 7.753 -1.672 1 10.02 ? O3S MES 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #