data_5JOZ # _model_server_result.job_id FCsU9SGaKOxgLnXLphfZgw _model_server_result.datetime_utc '2024-11-26 04:38:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5joz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 5JOZ # _exptl.entry_id 5JOZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.78 _cell.angle_gamma 90 _cell.entry_id 5JOZ _cell.length_a 91.46 _cell.length_b 71.4 _cell.length_c 160.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JOZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 313 A ASP 335 1_555 C CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc2 A O GLY 341 A GLY 363 1_555 C CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc3 A O ASP 499 A ASP 521 1_555 C CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc4 A OD1 ASP 499 A ASP 521 1_555 C CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc5 C CA CA . A CA 601 1_555 E O HOH . A HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc6 C CA CA . A CA 601 1_555 E O HOH . A HOH 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc7 B O ASP 313 B ASP 335 1_555 D CA CA . B CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc8 B O GLY 341 B GLY 363 1_555 D CA CA . B CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc9 B O ASP 499 B ASP 521 1_555 D CA CA . B CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc10 B OD1 ASP 499 B ASP 521 1_555 D CA CA . B CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc11 D CA CA . B CA 601 1_555 F O HOH . B HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc12 D CA CA . B CA 601 1_555 F O HOH . B HOH 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5JOZ _atom_sites.fract_transf_matrix[1][1] 0.010934 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000914 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00626 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 601 2 CA CA . D 2 CA B 1 601 1 CA CA . E 3 HOH A 1 701 157 HOH HOH . E 3 HOH A 2 702 101 HOH HOH . E 3 HOH A 3 703 75 HOH HOH . E 3 HOH A 4 704 91 HOH HOH . E 3 HOH A 5 705 53 HOH HOH . E 3 HOH A 6 706 57 HOH HOH . E 3 HOH A 7 707 4 HOH HOH . E 3 HOH A 8 708 60 HOH HOH . E 3 HOH A 9 709 156 HOH HOH . E 3 HOH A 10 710 83 HOH HOH . E 3 HOH A 11 711 159 HOH HOH . E 3 HOH A 12 712 80 HOH HOH . E 3 HOH A 13 713 74 HOH HOH . E 3 HOH A 14 714 67 HOH HOH . E 3 HOH A 15 715 81 HOH HOH . E 3 HOH A 16 716 139 HOH HOH . E 3 HOH A 17 717 69 HOH HOH . E 3 HOH A 18 718 146 HOH HOH . E 3 HOH A 19 719 208 HOH HOH . E 3 HOH A 20 720 92 HOH HOH . E 3 HOH A 21 721 148 HOH HOH . E 3 HOH A 22 722 94 HOH HOH . E 3 HOH A 23 723 155 HOH HOH . E 3 HOH A 24 724 76 HOH HOH . E 3 HOH A 25 725 7 HOH HOH . E 3 HOH A 26 726 49 HOH HOH . E 3 HOH A 27 727 55 HOH HOH . E 3 HOH A 28 728 37 HOH HOH . E 3 HOH A 29 729 48 HOH HOH . E 3 HOH A 30 730 43 HOH HOH . E 3 HOH A 31 731 147 HOH HOH . E 3 HOH A 32 732 142 HOH HOH . E 3 HOH A 33 733 100 HOH HOH . E 3 HOH A 34 734 82 HOH HOH . E 3 HOH A 35 735 18 HOH HOH . E 3 HOH A 36 736 158 HOH HOH . E 3 HOH A 37 737 84 HOH HOH . E 3 HOH A 38 738 88 HOH HOH . E 3 HOH A 39 739 196 HOH HOH . E 3 HOH A 40 740 9 HOH HOH . E 3 HOH A 41 741 102 HOH HOH . E 3 HOH A 42 742 199 HOH HOH . E 3 HOH A 43 743 68 HOH HOH . E 3 HOH A 44 744 51 HOH HOH . E 3 HOH A 45 745 138 HOH HOH . E 3 HOH A 46 746 78 HOH HOH . E 3 HOH A 47 747 143 HOH HOH . E 3 HOH A 48 748 65 HOH HOH . E 3 HOH A 49 749 93 HOH HOH . E 3 HOH A 50 750 50 HOH HOH . E 3 HOH A 51 751 98 HOH HOH . E 3 HOH A 52 752 149 HOH HOH . E 3 HOH A 53 753 58 HOH HOH . E 3 HOH A 54 754 154 HOH HOH . E 3 HOH A 55 755 153 HOH HOH . E 3 HOH A 56 756 19 HOH HOH . E 3 HOH A 57 757 198 HOH HOH . E 3 HOH A 58 758 86 HOH HOH . E 3 HOH A 59 759 70 HOH HOH . E 3 HOH A 60 760 35 HOH HOH . E 3 HOH A 61 761 188 HOH HOH . E 3 HOH A 62 762 90 HOH HOH . E 3 HOH A 63 763 59 HOH HOH . E 3 HOH A 64 764 193 HOH HOH . E 3 HOH A 65 765 61 HOH HOH . E 3 HOH A 66 766 56 HOH HOH . E 3 HOH A 67 767 206 HOH HOH . E 3 HOH A 68 768 63 HOH HOH . E 3 HOH A 69 769 24 HOH HOH . E 3 HOH A 70 770 186 HOH HOH . E 3 HOH A 71 771 13 HOH HOH . E 3 HOH A 72 772 33 HOH HOH . E 3 HOH A 73 773 45 HOH HOH . E 3 HOH A 74 774 16 HOH HOH . E 3 HOH A 75 775 141 HOH HOH . E 3 HOH A 76 776 72 HOH HOH . E 3 HOH A 77 777 190 HOH HOH . E 3 HOH A 78 778 87 HOH HOH . E 3 HOH A 79 779 47 HOH HOH . E 3 HOH A 80 780 79 HOH HOH . E 3 HOH A 81 781 14 HOH HOH . E 3 HOH A 82 782 52 HOH HOH . E 3 HOH A 83 783 151 HOH HOH . E 3 HOH A 84 784 195 HOH HOH . E 3 HOH A 85 785 145 HOH HOH . E 3 HOH A 86 786 73 HOH HOH . E 3 HOH A 87 787 41 HOH HOH . E 3 HOH A 88 788 46 HOH HOH . E 3 HOH A 89 789 6 HOH HOH . E 3 HOH A 90 790 97 HOH HOH . E 3 HOH A 91 791 150 HOH HOH . E 3 HOH A 92 792 99 HOH HOH . E 3 HOH A 93 793 95 HOH HOH . E 3 HOH A 94 794 54 HOH HOH . E 3 HOH A 95 795 29 HOH HOH . E 3 HOH A 96 796 194 HOH HOH . E 3 HOH A 97 797 89 HOH HOH . E 3 HOH A 98 798 140 HOH HOH . E 3 HOH A 99 799 96 HOH HOH . E 3 HOH A 100 800 187 HOH HOH . E 3 HOH A 101 801 85 HOH HOH . E 3 HOH A 102 802 209 HOH HOH . E 3 HOH A 103 803 25 HOH HOH . E 3 HOH A 104 804 152 HOH HOH . E 3 HOH A 105 805 207 HOH HOH . E 3 HOH A 106 806 203 HOH HOH . E 3 HOH A 107 807 204 HOH HOH . E 3 HOH A 108 808 184 HOH HOH . E 3 HOH A 109 809 144 HOH HOH . E 3 HOH A 110 810 77 HOH HOH . E 3 HOH A 111 811 64 HOH HOH . E 3 HOH A 112 812 62 HOH HOH . E 3 HOH A 113 813 3 HOH HOH . E 3 HOH A 114 814 71 HOH HOH . E 3 HOH A 115 815 191 HOH HOH . E 3 HOH A 116 816 192 HOH HOH . F 3 HOH B 1 701 181 HOH HOH . F 3 HOH B 2 702 132 HOH HOH . F 3 HOH B 3 703 2 HOH HOH . F 3 HOH B 4 704 134 HOH HOH . F 3 HOH B 5 705 135 HOH HOH . F 3 HOH B 6 706 197 HOH HOH . F 3 HOH B 7 707 108 HOH HOH . F 3 HOH B 8 708 167 HOH HOH . F 3 HOH B 9 709 173 HOH HOH . F 3 HOH B 10 710 172 HOH HOH . F 3 HOH B 11 711 124 HOH HOH . F 3 HOH B 12 712 162 HOH HOH . F 3 HOH B 13 713 126 HOH HOH . F 3 HOH B 14 714 109 HOH HOH . F 3 HOH B 15 715 169 HOH HOH . F 3 HOH B 16 716 182 HOH HOH . F 3 HOH B 17 717 179 HOH HOH . F 3 HOH B 18 718 164 HOH HOH . F 3 HOH B 19 719 12 HOH HOH . F 3 HOH B 20 720 20 HOH HOH . F 3 HOH B 21 721 21 HOH HOH . F 3 HOH B 22 722 38 HOH HOH . F 3 HOH B 23 723 117 HOH HOH . F 3 HOH B 24 724 121 HOH HOH . F 3 HOH B 25 725 200 HOH HOH . F 3 HOH B 26 726 104 HOH HOH . F 3 HOH B 27 727 107 HOH HOH . F 3 HOH B 28 728 36 HOH HOH . F 3 HOH B 29 729 119 HOH HOH . F 3 HOH B 30 730 34 HOH HOH . F 3 HOH B 31 731 111 HOH HOH . F 3 HOH B 32 732 176 HOH HOH . F 3 HOH B 33 733 15 HOH HOH . F 3 HOH B 34 734 202 HOH HOH . F 3 HOH B 35 735 166 HOH HOH . F 3 HOH B 36 736 136 HOH HOH . F 3 HOH B 37 737 114 HOH HOH . F 3 HOH B 38 738 28 HOH HOH . F 3 HOH B 39 739 105 HOH HOH . F 3 HOH B 40 740 42 HOH HOH . F 3 HOH B 41 741 10 HOH HOH . F 3 HOH B 42 742 120 HOH HOH . F 3 HOH B 43 743 210 HOH HOH . F 3 HOH B 44 744 127 HOH HOH . F 3 HOH B 45 745 22 HOH HOH . F 3 HOH B 46 746 123 HOH HOH . F 3 HOH B 47 747 27 HOH HOH . F 3 HOH B 48 748 183 HOH HOH . F 3 HOH B 49 749 189 HOH HOH . F 3 HOH B 50 750 174 HOH HOH . F 3 HOH B 51 751 113 HOH HOH . F 3 HOH B 52 752 131 HOH HOH . F 3 HOH B 53 753 32 HOH HOH . F 3 HOH B 54 754 11 HOH HOH . F 3 HOH B 55 755 23 HOH HOH . F 3 HOH B 56 756 137 HOH HOH . F 3 HOH B 57 757 160 HOH HOH . F 3 HOH B 58 758 133 HOH HOH . F 3 HOH B 59 759 128 HOH HOH . F 3 HOH B 60 760 5 HOH HOH . F 3 HOH B 61 761 171 HOH HOH . F 3 HOH B 62 762 39 HOH HOH . F 3 HOH B 63 763 168 HOH HOH . F 3 HOH B 64 764 130 HOH HOH . F 3 HOH B 65 765 163 HOH HOH . F 3 HOH B 66 766 30 HOH HOH . F 3 HOH B 67 767 129 HOH HOH . F 3 HOH B 68 768 161 HOH HOH . F 3 HOH B 69 769 122 HOH HOH . F 3 HOH B 70 770 40 HOH HOH . F 3 HOH B 71 771 110 HOH HOH . F 3 HOH B 72 772 112 HOH HOH . F 3 HOH B 73 773 170 HOH HOH . F 3 HOH B 74 774 180 HOH HOH . F 3 HOH B 75 775 31 HOH HOH . F 3 HOH B 76 776 175 HOH HOH . F 3 HOH B 77 777 178 HOH HOH . F 3 HOH B 78 778 8 HOH HOH . F 3 HOH B 79 779 44 HOH HOH . F 3 HOH B 80 780 26 HOH HOH . F 3 HOH B 81 781 118 HOH HOH . F 3 HOH B 82 782 17 HOH HOH . F 3 HOH B 83 783 103 HOH HOH . F 3 HOH B 84 784 177 HOH HOH . F 3 HOH B 85 785 115 HOH HOH . F 3 HOH B 86 786 1 HOH HOH . F 3 HOH B 87 787 106 HOH HOH . F 3 HOH B 88 788 125 HOH HOH . F 3 HOH B 89 789 116 HOH HOH . F 3 HOH B 90 790 185 HOH HOH . F 3 HOH B 91 791 205 HOH HOH . F 3 HOH B 92 792 165 HOH HOH . F 3 HOH B 93 793 201 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 5.846 _atom_site.Cartn_y 48.349 _atom_site.Cartn_z 130.865 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 601 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #