data_5JQ5 # _model_server_result.job_id 0XGTboIOxq4UHpdnKojHug _model_server_result.datetime_utc '2024-11-27 01:21:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5jq5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5JQ5 # _exptl.entry_id 5JQ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 394.513 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5JQ5 _cell.length_a 53.65 _cell.length_b 70.77 _cell.length_c 72.27 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JQ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H30 N6 O' _chem_comp.formula_weight 394.513 _chem_comp.id I74 _chem_comp.mon_nstd_flag . _chem_comp.name (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C15 I74 doub 158 n y C14 C13 I74 sing 159 n y C15 C16 I74 sing 160 n y C13 C12 I74 doub 161 n y C16 C17 I74 doub 162 n y C12 C17 I74 sing 163 n y C12 C11 I74 sing 164 n n N10 C11 I74 sing 165 n n N10 C3 I74 sing 166 n n N1 C9 I74 doub 167 n y N1 N2 I74 sing 168 n y C9 C8 I74 sing 169 n y C3 N2 I74 sing 170 n y C3 C4 I74 doub 171 n y N2 C7 I74 sing 172 n y C4 C5 I74 sing 173 n y C8 C7 I74 doub 174 n y C8 C26 I74 sing 175 n n C7 N6 I74 sing 176 n y C28 C26 I74 sing 177 n n C26 C27 I74 sing 178 n n C5 N6 I74 doub 179 n y C5 N18 I74 sing 180 n n N18 C40 I74 sing 181 n n C40 C41 I74 sing 182 n n C41 C46 I74 sing 183 n n C41 C42 I74 sing 184 n n C46 C45 I74 sing 185 n n O1 C42 I74 sing 186 n n C42 C43 I74 sing 187 n n C45 N44 I74 sing 188 n n C43 N44 I74 sing 189 n n O1 H1 I74 sing 190 n n C42 H2 I74 sing 191 n n C43 H3 I74 sing 192 n n C43 H4 I74 sing 193 n n N44 H5 I74 sing 194 n n C45 H7 I74 sing 195 n n C45 H8 I74 sing 196 n n C46 H9 I74 sing 197 n n C46 H10 I74 sing 198 n n C41 H11 I74 sing 199 n n C40 H12 I74 sing 200 n n C40 H13 I74 sing 201 n n N18 H14 I74 sing 202 n n C4 H15 I74 sing 203 n n C9 H16 I74 sing 204 n n C26 H17 I74 sing 205 n n C28 H18 I74 sing 206 n n C28 H19 I74 sing 207 n n C28 H20 I74 sing 208 n n C27 H21 I74 sing 209 n n C27 H22 I74 sing 210 n n C27 H23 I74 sing 211 n n N10 H24 I74 sing 212 n n C11 H25 I74 sing 213 n n C11 H26 I74 sing 214 n n C17 H27 I74 sing 215 n n C16 H28 I74 sing 216 n n C15 H29 I74 sing 217 n n C14 H30 I74 sing 218 n n C13 H31 I74 sing 219 n n # _atom_sites.entry_id 5JQ5 _atom_sites.fract_transf_matrix[1][1] 0.018639 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01413 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013837 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 301 1 ACT ACT . C 3 I74 A 1 302 0 I74 I74 . D 4 HOH A 1 401 59 HOH HOH . D 4 HOH A 2 402 101 HOH HOH . D 4 HOH A 3 403 80 HOH HOH . D 4 HOH A 4 404 38 HOH HOH . D 4 HOH A 5 405 109 HOH HOH . D 4 HOH A 6 406 65 HOH HOH . D 4 HOH A 7 407 52 HOH HOH . D 4 HOH A 8 408 4 HOH HOH . D 4 HOH A 9 409 17 HOH HOH . D 4 HOH A 10 410 29 HOH HOH . D 4 HOH A 11 411 30 HOH HOH . D 4 HOH A 12 412 1 HOH HOH . D 4 HOH A 13 413 45 HOH HOH . D 4 HOH A 14 414 30 HOH HOH . D 4 HOH A 15 415 34 HOH HOH . D 4 HOH A 16 416 12 HOH HOH . D 4 HOH A 17 417 56 HOH HOH . D 4 HOH A 18 418 291 HOH HOH . D 4 HOH A 19 419 124 HOH HOH . D 4 HOH A 20 420 35 HOH HOH . D 4 HOH A 21 421 289 HOH HOH . D 4 HOH A 22 422 20 HOH HOH . D 4 HOH A 23 423 73 HOH HOH . D 4 HOH A 24 424 110 HOH HOH . D 4 HOH A 25 425 48 HOH HOH . D 4 HOH A 26 426 8 HOH HOH . D 4 HOH A 27 427 126 HOH HOH . D 4 HOH A 28 428 41 HOH HOH . D 4 HOH A 29 429 16 HOH HOH . D 4 HOH A 30 430 49 HOH HOH . D 4 HOH A 31 431 19 HOH HOH . D 4 HOH A 32 432 92 HOH HOH . D 4 HOH A 33 433 33 HOH HOH . D 4 HOH A 34 434 120 HOH HOH . D 4 HOH A 35 435 14 HOH HOH . D 4 HOH A 36 436 97 HOH HOH . D 4 HOH A 37 437 115 HOH HOH . D 4 HOH A 38 438 146 HOH HOH . D 4 HOH A 39 439 178 HOH HOH . D 4 HOH A 40 440 56 HOH HOH . D 4 HOH A 41 441 99 HOH HOH . D 4 HOH A 42 442 29 HOH HOH . D 4 HOH A 43 443 150 HOH HOH . D 4 HOH A 44 444 64 HOH HOH . D 4 HOH A 45 445 24 HOH HOH . D 4 HOH A 46 446 44 HOH HOH . D 4 HOH A 47 447 116 HOH HOH . D 4 HOH A 48 448 86 HOH HOH . D 4 HOH A 49 449 22 HOH HOH . D 4 HOH A 50 450 107 HOH HOH . D 4 HOH A 51 451 2 HOH HOH . D 4 HOH A 52 452 50 HOH HOH . D 4 HOH A 53 453 170 HOH HOH . D 4 HOH A 54 454 3 HOH HOH . D 4 HOH A 55 455 17 HOH HOH . D 4 HOH A 56 456 9 HOH HOH . D 4 HOH A 57 457 9 HOH HOH . D 4 HOH A 58 458 3 HOH HOH . D 4 HOH A 59 459 100 HOH HOH . D 4 HOH A 60 460 287 HOH HOH . D 4 HOH A 61 461 142 HOH HOH . D 4 HOH A 62 462 12 HOH HOH . D 4 HOH A 63 463 76 HOH HOH . D 4 HOH A 64 464 135 HOH HOH . D 4 HOH A 65 465 15 HOH HOH . D 4 HOH A 66 466 26 HOH HOH . D 4 HOH A 67 467 63 HOH HOH . D 4 HOH A 68 468 28 HOH HOH . D 4 HOH A 69 469 60 HOH HOH . D 4 HOH A 70 470 2 HOH HOH . D 4 HOH A 71 471 165 HOH HOH . D 4 HOH A 72 472 7 HOH HOH . D 4 HOH A 73 473 47 HOH HOH . D 4 HOH A 74 474 85 HOH HOH . D 4 HOH A 75 475 37 HOH HOH . D 4 HOH A 76 476 1 HOH HOH . D 4 HOH A 77 477 5 HOH HOH . D 4 HOH A 78 478 165 HOH HOH . D 4 HOH A 79 479 15 HOH HOH . D 4 HOH A 80 480 46 HOH HOH . D 4 HOH A 81 481 26 HOH HOH . D 4 HOH A 82 482 47 HOH HOH . D 4 HOH A 83 483 177 HOH HOH . D 4 HOH A 84 484 162 HOH HOH . D 4 HOH A 85 485 114 HOH HOH . D 4 HOH A 86 486 55 HOH HOH . D 4 HOH A 87 487 69 HOH HOH . D 4 HOH A 88 488 10 HOH HOH . D 4 HOH A 89 489 32 HOH HOH . D 4 HOH A 90 490 72 HOH HOH . D 4 HOH A 91 491 25 HOH HOH . D 4 HOH A 92 492 193 HOH HOH . D 4 HOH A 93 493 75 HOH HOH . D 4 HOH A 94 494 58 HOH HOH . D 4 HOH A 95 495 94 HOH HOH . D 4 HOH A 96 496 16 HOH HOH . D 4 HOH A 97 497 13 HOH HOH . D 4 HOH A 98 498 5 HOH HOH . D 4 HOH A 99 499 23 HOH HOH . D 4 HOH A 100 500 102 HOH HOH . D 4 HOH A 101 501 129 HOH HOH . D 4 HOH A 102 502 125 HOH HOH . D 4 HOH A 103 503 81 HOH HOH . D 4 HOH A 104 504 173 HOH HOH . D 4 HOH A 105 505 88 HOH HOH . D 4 HOH A 106 506 7 HOH HOH . D 4 HOH A 107 507 290 HOH HOH . D 4 HOH A 108 508 62 HOH HOH . D 4 HOH A 109 509 4 HOH HOH . D 4 HOH A 110 510 96 HOH HOH . D 4 HOH A 111 511 94 HOH HOH . D 4 HOH A 112 512 51 HOH HOH . D 4 HOH A 113 513 53 HOH HOH . D 4 HOH A 114 514 1 HOH HOH . D 4 HOH A 115 515 83 HOH HOH . D 4 HOH A 116 516 31 HOH HOH . D 4 HOH A 117 517 2 HOH HOH . D 4 HOH A 118 518 168 HOH HOH . D 4 HOH A 119 519 103 HOH HOH . D 4 HOH A 120 520 49 HOH HOH . D 4 HOH A 121 521 9 HOH HOH . D 4 HOH A 122 522 90 HOH HOH . D 4 HOH A 123 523 6 HOH HOH . D 4 HOH A 124 524 74 HOH HOH . D 4 HOH A 125 525 36 HOH HOH . D 4 HOH A 126 526 70 HOH HOH . D 4 HOH A 127 527 288 HOH HOH . D 4 HOH A 128 528 64 HOH HOH . D 4 HOH A 129 529 268 HOH HOH . D 4 HOH A 130 530 150 HOH HOH . D 4 HOH A 131 531 144 HOH HOH . D 4 HOH A 132 532 292 HOH HOH . D 4 HOH A 133 533 21 HOH HOH . D 4 HOH A 134 534 71 HOH HOH . D 4 HOH A 135 535 273 HOH HOH . D 4 HOH A 136 536 175 HOH HOH . D 4 HOH A 137 537 78 HOH HOH . D 4 HOH A 138 538 68 HOH HOH . D 4 HOH A 139 539 133 HOH HOH . D 4 HOH A 140 540 270 HOH HOH . D 4 HOH A 141 541 252 HOH HOH . D 4 HOH A 142 542 271 HOH HOH . D 4 HOH A 143 543 197 HOH HOH . D 4 HOH A 144 544 61 HOH HOH . D 4 HOH A 145 545 137 HOH HOH . D 4 HOH A 146 546 106 HOH HOH . D 4 HOH A 147 547 158 HOH HOH . D 4 HOH A 148 548 162 HOH HOH . D 4 HOH A 149 549 89 HOH HOH . D 4 HOH A 150 550 269 HOH HOH . D 4 HOH A 151 551 50 HOH HOH . D 4 HOH A 152 552 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 I74 . . . C 3 0.268 -11.224 -24.79 1 29.74 ? O1 I74 302 A 1 HETATM 2 C C42 I74 . . . C 3 -0.839 -10.383 -24.55 1 25.34 ? C42 I74 302 A 1 HETATM 3 C C43 I74 . . . C 3 -0.68 -9.769 -23.159 1 23.68 ? C43 I74 302 A 1 HETATM 4 N N44 I74 . . . C 3 -1.567 -8.601 -23.07 1 23.06 ? N44 I74 302 A 1 HETATM 5 C C45 I74 . . . C 3 -1.499 -7.56 -24.073 1 26.75 ? C45 I74 302 A 1 HETATM 6 C C46 I74 . . . C 3 -1.527 -8.047 -25.527 1 27.29 ? C46 I74 302 A 1 HETATM 7 C C41 I74 . . . C 3 -0.707 -9.354 -25.658 1 25.46 ? C41 I74 302 A 1 HETATM 8 C C40 I74 . . . C 3 -0.826 -9.941 -27.055 1 18.66 ? C40 I74 302 A 1 HETATM 9 N N18 I74 . . . C 3 0.497 -9.755 -27.623 1 19.53 ? N18 I74 302 A 1 HETATM 10 C C5 I74 . . . C 3 0.946 -8.56 -28.154 1 14.65 ? C5 I74 302 A 1 HETATM 11 C C4 I74 . . . C 3 2.205 -8.469 -28.781 1 12.31 ? C4 I74 302 A 1 HETATM 12 C C3 I74 . . . C 3 2.601 -7.216 -29.314 1 14.74 ? C3 I74 302 A 1 HETATM 13 N N2 I74 . . . C 3 1.723 -6.166 -29.255 1 12.2 ? N2 I74 302 A 1 HETATM 14 N N1 I74 . . . C 3 1.979 -4.873 -29.69 1 10.27 ? N1 I74 302 A 1 HETATM 15 C C9 I74 . . . C 3 0.89 -4.133 -29.328 1 11.56 ? C9 I74 302 A 1 HETATM 16 C C8 I74 . . . C 3 -0.006 -5.013 -28.698 1 13.92 ? C8 I74 302 A 1 HETATM 17 C C26 I74 . . . C 3 -1.337 -4.536 -28.164 1 10.86 ? C26 I74 302 A 1 HETATM 18 C C28 I74 . . . C 3 -2.537 -5.456 -28.444 1 10.57 ? C28 I74 302 A 1 HETATM 19 C C27 I74 . . . C 3 -1.294 -4.406 -26.617 1 11.37 ? C27 I74 302 A 1 HETATM 20 C C7 I74 . . . C 3 0.575 -6.289 -28.628 1 10.77 ? C7 I74 302 A 1 HETATM 21 N N6 I74 . . . C 3 0.142 -7.464 -28.103 1 16.12 ? N6 I74 302 A 1 HETATM 22 N N10 I74 . . . C 3 3.774 -7.046 -29.914 1 18.19 ? N10 I74 302 A 1 HETATM 23 C C11 I74 . . . C 3 4.913 -7.898 -29.565 1 20.37 ? C11 I74 302 A 1 HETATM 24 C C12 I74 . . . C 3 5.017 -8.948 -30.635 1 21.99 ? C12 I74 302 A 1 HETATM 25 C C17 I74 . . . C 3 4.942 -10.285 -30.271 1 21.76 ? C17 I74 302 A 1 HETATM 26 C C16 I74 . . . C 3 5.026 -11.241 -31.269 1 21.48 ? C16 I74 302 A 1 HETATM 27 C C15 I74 . . . C 3 5.19 -10.878 -32.625 1 23.58 ? C15 I74 302 A 1 HETATM 28 C C14 I74 . . . C 3 5.25 -9.526 -32.996 1 22.03 ? C14 I74 302 A 1 HETATM 29 C C13 I74 . . . C 3 5.177 -8.572 -31.982 1 22.57 ? C13 I74 302 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #