data_5JRQ
#
_model_server_result.job_id            kTascH7afmMXv-fL1HW-0Q 
_model_server_result.datetime_utc      '2024-10-18 15:22:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5jrq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":802}' 
#
_entry.id    5JRQ 
#
_exptl.entry_id    5JRQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.32 
_cell.angle_gamma         90 
_cell.entry_id            5JRQ 
_cell.length_a            56.836 
_cell.length_b            67.753 
_cell.length_c            67.881 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5JRQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 141 n n 
S C1 DMS sing 142 n n 
S C2 DMS sing 143 n n 
C1 H11 DMS sing 144 n n 
C1 H12 DMS sing 145 n n 
C1 H13 DMS sing 146 n n 
C2 H21 DMS sing 147 n n 
C2 H22 DMS sing 148 n n 
C2 H23 DMS sing 149 n n 
#
_atom_sites.entry_id                     5JRQ 
_atom_sites.fract_transf_matrix[1][1]    0.017594 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000097 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014759 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014732 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 6N9 A 1 801 1 6N9 LIG . 
D 3 DMS A 1 802 2 DMS DMS . 
E 4 GOL A 1 803 3 GOL GOL . 
F 5 TMA A 1 804 4 TMA TMA . 
G 2 6N9 B 1 801 721 6N9 LIG . 
H 3 DMS B 1 802 722 DMS DMS . 
I 5 TMA B 1 803 723 TMA TMA . 
J 6 HOH A 1 901 88 HOH HOH . 
J 6 HOH A 2 902 78 HOH HOH . 
J 6 HOH A 3 903 80 HOH HOH . 
J 6 HOH A 4 904 13 HOH HOH . 
J 6 HOH A 5 905 48 HOH HOH . 
J 6 HOH A 6 906 11 HOH HOH . 
J 6 HOH A 7 907 38 HOH HOH . 
J 6 HOH A 8 908 36 HOH HOH . 
J 6 HOH A 9 909 31 HOH HOH . 
J 6 HOH A 10 910 90 HOH HOH . 
J 6 HOH A 11 911 69 HOH HOH . 
J 6 HOH A 12 912 96 HOH HOH . 
J 6 HOH A 13 913 30 HOH HOH . 
J 6 HOH A 14 914 68 HOH HOH . 
J 6 HOH A 15 915 40 HOH HOH . 
J 6 HOH A 16 916 62 HOH HOH . 
J 6 HOH A 17 917 27 HOH HOH . 
J 6 HOH A 18 918 14 HOH HOH . 
J 6 HOH A 19 919 21 HOH HOH . 
J 6 HOH A 20 920 23 HOH HOH . 
J 6 HOH A 21 921 86 HOH HOH . 
J 6 HOH A 22 922 16 HOH HOH . 
J 6 HOH A 23 923 20 HOH HOH . 
J 6 HOH A 24 924 64 HOH HOH . 
J 6 HOH A 25 925 15 HOH HOH . 
J 6 HOH A 26 926 81 HOH HOH . 
J 6 HOH A 27 927 17 HOH HOH . 
J 6 HOH A 28 928 19 HOH HOH . 
J 6 HOH A 29 929 12 HOH HOH . 
J 6 HOH A 30 930 59 HOH HOH . 
J 6 HOH A 31 931 75 HOH HOH . 
J 6 HOH A 32 932 63 HOH HOH . 
J 6 HOH A 33 933 9 HOH HOH . 
J 6 HOH A 34 934 91 HOH HOH . 
J 6 HOH A 35 935 39 HOH HOH . 
J 6 HOH A 36 936 5 HOH HOH . 
J 6 HOH A 37 937 41 HOH HOH . 
J 6 HOH A 38 938 50 HOH HOH . 
J 6 HOH A 39 939 32 HOH HOH . 
J 6 HOH A 40 940 42 HOH HOH . 
J 6 HOH A 41 941 45 HOH HOH . 
J 6 HOH A 42 942 35 HOH HOH . 
J 6 HOH A 43 943 28 HOH HOH . 
J 6 HOH A 44 944 52 HOH HOH . 
J 6 HOH A 45 945 22 HOH HOH . 
J 6 HOH A 46 946 58 HOH HOH . 
J 6 HOH A 47 947 89 HOH HOH . 
J 6 HOH A 48 948 47 HOH HOH . 
J 6 HOH A 49 949 76 HOH HOH . 
J 6 HOH A 50 950 72 HOH HOH . 
J 6 HOH A 51 951 7 HOH HOH . 
J 6 HOH A 52 952 84 HOH HOH . 
J 6 HOH A 53 953 77 HOH HOH . 
J 6 HOH A 54 954 55 HOH HOH . 
J 6 HOH A 55 955 8 HOH HOH . 
J 6 HOH A 56 956 37 HOH HOH . 
J 6 HOH A 57 957 33 HOH HOH . 
J 6 HOH A 58 958 87 HOH HOH . 
J 6 HOH A 59 959 85 HOH HOH . 
J 6 HOH A 60 960 44 HOH HOH . 
J 6 HOH A 61 961 71 HOH HOH . 
J 6 HOH A 62 962 61 HOH HOH . 
J 6 HOH A 63 963 6 HOH HOH . 
J 6 HOH A 64 964 25 HOH HOH . 
J 6 HOH A 65 965 26 HOH HOH . 
J 6 HOH A 66 966 10 HOH HOH . 
J 6 HOH A 67 967 49 HOH HOH . 
J 6 HOH A 68 968 43 HOH HOH . 
J 6 HOH A 69 969 60 HOH HOH . 
J 6 HOH A 70 970 29 HOH HOH . 
J 6 HOH A 71 971 24 HOH HOH . 
J 6 HOH A 72 972 65 HOH HOH . 
J 6 HOH A 73 973 95 HOH HOH . 
J 6 HOH A 74 974 93 HOH HOH . 
J 6 HOH A 75 975 79 HOH HOH . 
J 6 HOH A 76 976 18 HOH HOH . 
J 6 HOH A 77 977 73 HOH HOH . 
J 6 HOH A 78 978 67 HOH HOH . 
J 6 HOH A 79 979 70 HOH HOH . 
J 6 HOH A 80 980 82 HOH HOH . 
J 6 HOH A 81 981 34 HOH HOH . 
J 6 HOH A 82 982 56 HOH HOH . 
J 6 HOH A 83 983 51 HOH HOH . 
J 6 HOH A 84 984 83 HOH HOH . 
J 6 HOH A 85 985 74 HOH HOH . 
J 6 HOH A 86 986 92 HOH HOH . 
J 6 HOH A 87 987 57 HOH HOH . 
J 6 HOH A 88 988 66 HOH HOH . 
J 6 HOH A 89 989 53 HOH HOH . 
J 6 HOH A 90 990 94 HOH HOH . 
J 6 HOH A 91 991 46 HOH HOH . 
J 6 HOH A 92 992 54 HOH HOH . 
K 6 HOH B 1 901 799 HOH HOH . 
K 6 HOH B 2 902 769 HOH HOH . 
K 6 HOH B 3 903 761 HOH HOH . 
K 6 HOH B 4 904 806 HOH HOH . 
K 6 HOH B 5 905 750 HOH HOH . 
K 6 HOH B 6 906 754 HOH HOH . 
K 6 HOH B 7 907 765 HOH HOH . 
K 6 HOH B 8 908 797 HOH HOH . 
K 6 HOH B 9 909 744 HOH HOH . 
K 6 HOH B 10 910 776 HOH HOH . 
K 6 HOH B 11 911 742 HOH HOH . 
K 6 HOH B 12 912 800 HOH HOH . 
K 6 HOH B 13 913 775 HOH HOH . 
K 6 HOH B 14 914 753 HOH HOH . 
K 6 HOH B 15 915 758 HOH HOH . 
K 6 HOH B 16 916 759 HOH HOH . 
K 6 HOH B 17 917 731 HOH HOH . 
K 6 HOH B 18 918 755 HOH HOH . 
K 6 HOH B 19 919 766 HOH HOH . 
K 6 HOH B 20 920 803 HOH HOH . 
K 6 HOH B 21 921 787 HOH HOH . 
K 6 HOH B 22 922 798 HOH HOH . 
K 6 HOH B 23 923 791 HOH HOH . 
K 6 HOH B 24 924 768 HOH HOH . 
K 6 HOH B 25 925 767 HOH HOH . 
K 6 HOH B 26 926 746 HOH HOH . 
K 6 HOH B 27 927 802 HOH HOH . 
K 6 HOH B 28 928 764 HOH HOH . 
K 6 HOH B 29 929 738 HOH HOH . 
K 6 HOH B 30 930 733 HOH HOH . 
K 6 HOH B 31 931 729 HOH HOH . 
K 6 HOH B 32 932 727 HOH HOH . 
K 6 HOH B 33 933 781 HOH HOH . 
K 6 HOH B 34 934 745 HOH HOH . 
K 6 HOH B 35 935 728 HOH HOH . 
K 6 HOH B 36 936 773 HOH HOH . 
K 6 HOH B 37 937 734 HOH HOH . 
K 6 HOH B 38 938 732 HOH HOH . 
K 6 HOH B 39 939 777 HOH HOH . 
K 6 HOH B 40 940 751 HOH HOH . 
K 6 HOH B 41 941 740 HOH HOH . 
K 6 HOH B 42 942 726 HOH HOH . 
K 6 HOH B 43 943 772 HOH HOH . 
K 6 HOH B 44 944 774 HOH HOH . 
K 6 HOH B 45 945 757 HOH HOH . 
K 6 HOH B 46 946 794 HOH HOH . 
K 6 HOH B 47 947 789 HOH HOH . 
K 6 HOH B 48 948 739 HOH HOH . 
K 6 HOH B 49 949 785 HOH HOH . 
K 6 HOH B 50 950 730 HOH HOH . 
K 6 HOH B 51 951 735 HOH HOH . 
K 6 HOH B 52 952 763 HOH HOH . 
K 6 HOH B 53 953 724 HOH HOH . 
K 6 HOH B 54 954 771 HOH HOH . 
K 6 HOH B 55 955 795 HOH HOH . 
K 6 HOH B 56 956 736 HOH HOH . 
K 6 HOH B 57 957 778 HOH HOH . 
K 6 HOH B 58 958 725 HOH HOH . 
K 6 HOH B 59 959 760 HOH HOH . 
K 6 HOH B 60 960 780 HOH HOH . 
K 6 HOH B 61 961 801 HOH HOH . 
K 6 HOH B 62 962 790 HOH HOH . 
K 6 HOH B 63 963 783 HOH HOH . 
K 6 HOH B 64 964 743 HOH HOH . 
K 6 HOH B 65 965 737 HOH HOH . 
K 6 HOH B 66 966 756 HOH HOH . 
K 6 HOH B 67 967 792 HOH HOH . 
K 6 HOH B 68 968 796 HOH HOH . 
K 6 HOH B 69 969 804 HOH HOH . 
K 6 HOH B 70 970 741 HOH HOH . 
K 6 HOH B 71 971 786 HOH HOH . 
K 6 HOH B 72 972 752 HOH HOH . 
K 6 HOH B 73 973 779 HOH HOH . 
K 6 HOH B 74 974 805 HOH HOH . 
K 6 HOH B 75 975 747 HOH HOH . 
K 6 HOH B 76 976 749 HOH HOH . 
K 6 HOH B 77 977 748 HOH HOH . 
K 6 HOH B 78 978 762 HOH HOH . 
K 6 HOH B 79 979 793 HOH HOH . 
K 6 HOH B 80 980 770 HOH HOH . 
K 6 HOH B 81 981 782 HOH HOH . 
K 6 HOH B 82 982 784 HOH HOH . 
K 6 HOH B 83 983 788 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . H 3 -5.955 -37.523 3.274 1 61.33 ? S DMS 802 B 1 
HETATM 2 O O DMS . . . H 3 -5.293 -38.687 2.6 1 59.16 ? O DMS 802 B 1 
HETATM 3 C C1 DMS . . . H 3 -5.222 -37.336 4.928 1 36.7 ? C1 DMS 802 B 1 
HETATM 4 C C2 DMS . . . H 3 -5.434 -35.987 2.445 1 29.45 ? C2 DMS 802 B 1 
HETATM 5 H H11 DMS . . . H 3 -5.457 -38.184 5.517 1 44.04 ? H11 DMS 802 B 1 
HETATM 6 H H12 DMS . . . H 3 -5.611 -36.466 5.39 1 44.04 ? H12 DMS 802 B 1 
HETATM 7 H H13 DMS . . . H 3 -4.17 -37.249 4.84 1 44.04 ? H13 DMS 802 B 1 
HETATM 8 H H21 DMS . . . H 3 -5.797 -35.982 1.45 1 35.34 ? H21 DMS 802 B 1 
HETATM 9 H H22 DMS . . . H 3 -4.377 -35.932 2.435 1 35.34 ? H22 DMS 802 B 1 
HETATM 10 H H23 DMS . . . H 3 -5.826 -35.153 2.967 1 35.34 ? H23 DMS 802 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
#