data_5JS1
#
_model_server_result.job_id            eQ5YYODKN4ZIdoEheS65gA 
_model_server_result.datetime_utc      '2024-11-04 22:21:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5js1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":902}' 
#
_entry.id    5JS1 
#
_exptl.entry_id    5JS1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.111 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHENOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.98 
_cell.angle_gamma         90 
_cell.entry_id            5JS1 
_cell.length_a            62.932 
_cell.length_b            107.119 
_cell.length_c            68.198 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5JS1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 597 A ASP 597 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc2 A OD2 ASP 669 A ASP 669 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc3 E MG MG . A MG 903 1_555 F O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc4 E MG MG . A MG 903 1_555 F O HOH . A HOH 1011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc5 E MG MG . A MG 903 1_555 F O HOH . A HOH 1016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
#
_chem_comp.formula           'C6 H6 O' 
_chem_comp.formula_weight    94.111 
_chem_comp.id                IPH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PHENOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 IPH doub 288 n y 
C1 C6 IPH sing 289 n y 
C1 O1 IPH sing 290 n n 
C2 C3 IPH sing 291 n y 
C2 H2 IPH sing 292 n n 
C3 C4 IPH doub 293 n y 
C3 H3 IPH sing 294 n n 
C4 C5 IPH sing 295 n y 
C4 H4 IPH sing 296 n n 
C5 C6 IPH doub 297 n y 
C5 H5 IPH sing 298 n n 
C6 H6 IPH sing 299 n n 
O1 HO1 IPH sing 300 n n 
#
_atom_sites.entry_id                     5JS1 
_atom_sites.fract_transf_matrix[1][1]    0.01589 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004854 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009335 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015332 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 IPH A 1 901 1 IPH IPH . 
D 3 IPH A 1 902 2 IPH IPH . 
E 4 MG A 1 903 1 MG MG . 
F 5 HOH A 1 1001 71 HOH HOH . 
F 5 HOH A 2 1002 67 HOH HOH . 
F 5 HOH A 3 1003 70 HOH HOH . 
F 5 HOH A 4 1004 27 HOH HOH . 
F 5 HOH A 5 1005 8 HOH HOH . 
F 5 HOH A 6 1006 52 HOH HOH . 
F 5 HOH A 7 1007 72 HOH HOH . 
F 5 HOH A 8 1008 30 HOH HOH . 
F 5 HOH A 9 1009 68 HOH HOH . 
F 5 HOH A 10 1010 1 HOH HOH . 
F 5 HOH A 11 1011 48 HOH HOH . 
F 5 HOH A 12 1012 12 HOH HOH . 
F 5 HOH A 13 1013 5 HOH HOH . 
F 5 HOH A 14 1014 21 HOH HOH . 
F 5 HOH A 15 1015 34 HOH HOH . 
F 5 HOH A 16 1016 47 HOH HOH . 
F 5 HOH A 17 1017 40 HOH HOH . 
F 5 HOH A 18 1018 66 HOH HOH . 
F 5 HOH A 19 1019 59 HOH HOH . 
F 5 HOH A 20 1020 20 HOH HOH . 
F 5 HOH A 21 1021 43 HOH HOH . 
F 5 HOH A 22 1022 13 HOH HOH . 
F 5 HOH A 23 1023 17 HOH HOH . 
F 5 HOH A 24 1024 69 HOH HOH . 
F 5 HOH A 25 1025 3 HOH HOH . 
F 5 HOH A 26 1026 19 HOH HOH . 
F 5 HOH A 27 1027 26 HOH HOH . 
F 5 HOH A 28 1028 15 HOH HOH . 
F 5 HOH A 29 1029 44 HOH HOH . 
F 5 HOH A 30 1030 63 HOH HOH . 
F 5 HOH A 31 1031 32 HOH HOH . 
F 5 HOH A 32 1032 56 HOH HOH . 
F 5 HOH A 33 1033 31 HOH HOH . 
F 5 HOH A 34 1034 14 HOH HOH . 
F 5 HOH A 35 1035 61 HOH HOH . 
F 5 HOH A 36 1036 2 HOH HOH . 
F 5 HOH A 37 1037 46 HOH HOH . 
F 5 HOH A 38 1038 35 HOH HOH . 
F 5 HOH A 39 1039 25 HOH HOH . 
F 5 HOH A 40 1040 54 HOH HOH . 
F 5 HOH A 41 1041 45 HOH HOH . 
F 5 HOH A 42 1042 6 HOH HOH . 
F 5 HOH A 43 1043 38 HOH HOH . 
F 5 HOH A 44 1044 18 HOH HOH . 
F 5 HOH A 45 1045 41 HOH HOH . 
F 5 HOH A 46 1046 24 HOH HOH . 
G 5 HOH B 1 101 4 HOH HOH . 
G 5 HOH B 2 102 53 HOH HOH . 
G 5 HOH B 3 103 57 HOH HOH . 
G 5 HOH B 4 104 51 HOH HOH . 
G 5 HOH B 5 105 10 HOH HOH . 
G 5 HOH B 6 106 49 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 IPH . . . D 3 -3.538 31.307 56.434 1 112.27 ? C1 IPH 902 A 1 
HETATM 2 C C2 IPH . . . D 3 -2.669 31.547 55.406 1 111.6 ? C2 IPH 902 A 1 
HETATM 3 C C3 IPH . . . D 3 -2.823 30.903 54.211 1 110.35 ? C3 IPH 902 A 1 
HETATM 4 C C4 IPH . . . D 3 -3.864 30.026 54.058 1 110.06 ? C4 IPH 902 A 1 
HETATM 5 C C5 IPH . . . D 3 -4.735 29.779 55.088 1 111.26 ? C5 IPH 902 A 1 
HETATM 6 C C6 IPH . . . D 3 -4.58 30.426 56.285 1 112.5 ? C6 IPH 902 A 1 
HETATM 7 O O1 IPH . . . D 3 -3.378 31.946 57.605 1 112.01 ? O1 IPH 902 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           7 
#