data_5JS1 # _model_server_result.job_id juLQ3QiqiPP0pgyWclOMeQ _model_server_result.datetime_utc '2024-11-04 22:16:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5js1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":903}' # _entry.id 5JS1 # _exptl.entry_id 5JS1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.98 _cell.angle_gamma 90 _cell.entry_id 5JS1 _cell.length_a 62.932 _cell.length_b 107.119 _cell.length_c 68.198 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JS1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 597 A ASP 597 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc2 A OD2 ASP 669 A ASP 669 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc3 E MG MG . A MG 903 1_555 F O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc4 E MG MG . A MG 903 1_555 F O HOH . A HOH 1011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc5 E MG MG . A MG 903 1_555 F O HOH . A HOH 1016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5JS1 _atom_sites.fract_transf_matrix[1][1] 0.01589 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004854 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009335 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015332 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 IPH A 1 901 1 IPH IPH . D 3 IPH A 1 902 2 IPH IPH . E 4 MG A 1 903 1 MG MG . F 5 HOH A 1 1001 71 HOH HOH . F 5 HOH A 2 1002 67 HOH HOH . F 5 HOH A 3 1003 70 HOH HOH . F 5 HOH A 4 1004 27 HOH HOH . F 5 HOH A 5 1005 8 HOH HOH . F 5 HOH A 6 1006 52 HOH HOH . F 5 HOH A 7 1007 72 HOH HOH . F 5 HOH A 8 1008 30 HOH HOH . F 5 HOH A 9 1009 68 HOH HOH . F 5 HOH A 10 1010 1 HOH HOH . F 5 HOH A 11 1011 48 HOH HOH . F 5 HOH A 12 1012 12 HOH HOH . F 5 HOH A 13 1013 5 HOH HOH . F 5 HOH A 14 1014 21 HOH HOH . F 5 HOH A 15 1015 34 HOH HOH . F 5 HOH A 16 1016 47 HOH HOH . F 5 HOH A 17 1017 40 HOH HOH . F 5 HOH A 18 1018 66 HOH HOH . F 5 HOH A 19 1019 59 HOH HOH . F 5 HOH A 20 1020 20 HOH HOH . F 5 HOH A 21 1021 43 HOH HOH . F 5 HOH A 22 1022 13 HOH HOH . F 5 HOH A 23 1023 17 HOH HOH . F 5 HOH A 24 1024 69 HOH HOH . F 5 HOH A 25 1025 3 HOH HOH . F 5 HOH A 26 1026 19 HOH HOH . F 5 HOH A 27 1027 26 HOH HOH . F 5 HOH A 28 1028 15 HOH HOH . F 5 HOH A 29 1029 44 HOH HOH . F 5 HOH A 30 1030 63 HOH HOH . F 5 HOH A 31 1031 32 HOH HOH . F 5 HOH A 32 1032 56 HOH HOH . F 5 HOH A 33 1033 31 HOH HOH . F 5 HOH A 34 1034 14 HOH HOH . F 5 HOH A 35 1035 61 HOH HOH . F 5 HOH A 36 1036 2 HOH HOH . F 5 HOH A 37 1037 46 HOH HOH . F 5 HOH A 38 1038 35 HOH HOH . F 5 HOH A 39 1039 25 HOH HOH . F 5 HOH A 40 1040 54 HOH HOH . F 5 HOH A 41 1041 45 HOH HOH . F 5 HOH A 42 1042 6 HOH HOH . F 5 HOH A 43 1043 38 HOH HOH . F 5 HOH A 44 1044 18 HOH HOH . F 5 HOH A 45 1045 41 HOH HOH . F 5 HOH A 46 1046 24 HOH HOH . G 5 HOH B 1 101 4 HOH HOH . G 5 HOH B 2 102 53 HOH HOH . G 5 HOH B 3 103 57 HOH HOH . G 5 HOH B 4 104 51 HOH HOH . G 5 HOH B 5 105 10 HOH HOH . G 5 HOH B 6 106 49 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -19.017 _atom_site.Cartn_y 12.842 _atom_site.Cartn_z 41.149 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 903 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #