data_5JS2 # _model_server_result.job_id R89X3Yp8HGpV72MkIN5Lvw _model_server_result.datetime_utc '2024-11-26 00:15:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5js2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 5JS2 # _exptl.entry_id 5JS2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.111 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.39 _cell.angle_gamma 90 _cell.entry_id 5JS2 _cell.length_a 63.102 _cell.length_b 107.552 _cell.length_c 68.893 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JS2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O3' 6OP 1 B 6OP 901 1_555 B P F2T 2 B F2T 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.549 ? covale ? covale2 B O3' F2T 2 B F2T 902 1_555 B P 6NW 3 B 6NW 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.55 ? covale ? covale3 B O3' 6NW 3 B 6NW 903 1_555 B P UFT 4 B UFT 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.529 ? covale ? covale4 B O3' UFT 4 B UFT 904 1_555 B P 6OO 5 B 6OO 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.577 ? covale ? covale5 B O3' 6OO 5 B 6OO 905 1_555 B P UFT 6 B UFT 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.569 ? metalc ? metalc1 A OD1 ASP 597 A ASP 597 1_555 F MG MG . A MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc2 A OD2 ASP 597 A ASP 597 1_555 F MG MG . A MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc3 A O VAL 598 A VAL 598 1_555 F MG MG . A MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'C6 H6 O' _chem_comp.formula_weight 94.111 _chem_comp.id IPH _chem_comp.mon_nstd_flag . _chem_comp.name PHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPH doub 336 n y C1 C6 IPH sing 337 n y C1 O1 IPH sing 338 n n C2 C3 IPH sing 339 n y C2 H2 IPH sing 340 n n C3 C4 IPH doub 341 n y C3 H3 IPH sing 342 n n C4 C5 IPH sing 343 n y C4 H4 IPH sing 344 n n C5 C6 IPH doub 345 n y C5 H5 IPH sing 346 n n C6 H6 IPH sing 347 n n O1 HO1 IPH sing 348 n n # _atom_sites.entry_id 5JS2 _atom_sites.fract_transf_matrix[1][1] 0.015847 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004962 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009298 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01521 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 IPH A 1 901 1 IPH IPH . D 3 IPH A 1 902 2 IPH IPH . E 4 PO4 A 1 903 1 PO4 PO4 . F 5 MG A 1 904 1 MG MG . G 6 HOH A 1 1001 1 HOH HOH . G 6 HOH A 2 1002 4 HOH HOH . G 6 HOH A 3 1003 8 HOH HOH . G 6 HOH A 4 1004 10 HOH HOH . G 6 HOH A 5 1005 11 HOH HOH . G 6 HOH A 6 1006 7 HOH HOH . G 6 HOH A 7 1007 5 HOH HOH . G 6 HOH A 8 1008 9 HOH HOH . G 6 HOH A 9 1009 6 HOH HOH . G 6 HOH A 10 1010 12 HOH HOH . G 6 HOH A 11 1011 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPH . . . D 3 -4.834 31.281 57.128 1 55.37 ? C1 IPH 902 A 1 HETATM 2 C C2 IPH . . . D 3 -5.568 30.502 56.239 1 53.17 ? C2 IPH 902 A 1 HETATM 3 C C3 IPH . . . D 3 -5.071 30.242 54.967 1 52.02 ? C3 IPH 902 A 1 HETATM 4 C C4 IPH . . . D 3 -3.841 30.764 54.583 1 48.58 ? C4 IPH 902 A 1 HETATM 5 C C5 IPH . . . D 3 -3.108 31.542 55.471 1 53.04 ? C5 IPH 902 A 1 HETATM 6 C C6 IPH . . . D 3 -3.605 31.803 56.744 1 50.96 ? C6 IPH 902 A 1 HETATM 7 O O1 IPH . . . D 3 -5.322 31.536 58.382 1 64.33 ? O1 IPH 902 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #