data_5JSF
#
_model_server_result.job_id            1egBhjHiuGdV75xfCn5DUQ 
_model_server_result.datetime_utc      '2024-11-14 20:12:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5jsf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    5JSF 
#
_exptl.entry_id    5JSF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5JSF 
_cell.length_a            130.256 
_cell.length_b            130.256 
_cell.length_c            130.256 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5JSF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        197 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 130.256 
4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 130.256 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLU 52 A GLU 50 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? 
metalc ? metalc2 A O LEU 55 A LEU 53 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? 
metalc ? metalc3 A O ALA 58 A ALA 56 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5JSF 
_atom_sites.fract_transf_matrix[1][1]    0.007677 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007677 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007677 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAD A 1 301 1 NAD NAD . 
C 3 NA A 1 302 1 NA NA . 
D 4 PGE A 1 303 1 PGE PGE . 
E 5 CL A 1 304 1 CL CL . 
F 6 HOH A 1 401 89 HOH HOH . 
F 6 HOH A 2 402 32 HOH HOH . 
F 6 HOH A 3 403 107 HOH HOH . 
F 6 HOH A 4 404 108 HOH HOH . 
F 6 HOH A 5 405 60 HOH HOH . 
F 6 HOH A 6 406 72 HOH HOH . 
F 6 HOH A 7 407 23 HOH HOH . 
F 6 HOH A 8 408 11 HOH HOH . 
F 6 HOH A 9 409 113 HOH HOH . 
F 6 HOH A 10 410 19 HOH HOH . 
F 6 HOH A 11 411 43 HOH HOH . 
F 6 HOH A 12 412 51 HOH HOH . 
F 6 HOH A 13 413 4 HOH HOH . 
F 6 HOH A 14 414 55 HOH HOH . 
F 6 HOH A 15 415 22 HOH HOH . 
F 6 HOH A 16 416 44 HOH HOH . 
F 6 HOH A 17 417 109 HOH HOH . 
F 6 HOH A 18 418 5 HOH HOH . 
F 6 HOH A 19 419 3 HOH HOH . 
F 6 HOH A 20 420 16 HOH HOH . 
F 6 HOH A 21 421 47 HOH HOH . 
F 6 HOH A 22 422 66 HOH HOH . 
F 6 HOH A 23 423 40 HOH HOH . 
F 6 HOH A 24 424 24 HOH HOH . 
F 6 HOH A 25 425 14 HOH HOH . 
F 6 HOH A 26 426 77 HOH HOH . 
F 6 HOH A 27 427 34 HOH HOH . 
F 6 HOH A 28 428 37 HOH HOH . 
F 6 HOH A 29 429 30 HOH HOH . 
F 6 HOH A 30 430 33 HOH HOH . 
F 6 HOH A 31 431 15 HOH HOH . 
F 6 HOH A 32 432 27 HOH HOH . 
F 6 HOH A 33 433 49 HOH HOH . 
F 6 HOH A 34 434 106 HOH HOH . 
F 6 HOH A 35 435 21 HOH HOH . 
F 6 HOH A 36 436 9 HOH HOH . 
F 6 HOH A 37 437 67 HOH HOH . 
F 6 HOH A 38 438 26 HOH HOH . 
F 6 HOH A 39 439 6 HOH HOH . 
F 6 HOH A 40 440 18 HOH HOH . 
F 6 HOH A 41 441 88 HOH HOH . 
F 6 HOH A 42 442 10 HOH HOH . 
F 6 HOH A 43 443 121 HOH HOH . 
F 6 HOH A 44 444 79 HOH HOH . 
F 6 HOH A 45 445 36 HOH HOH . 
F 6 HOH A 46 446 52 HOH HOH . 
F 6 HOH A 47 447 31 HOH HOH . 
F 6 HOH A 48 448 117 HOH HOH . 
F 6 HOH A 49 449 42 HOH HOH . 
F 6 HOH A 50 450 118 HOH HOH . 
F 6 HOH A 51 451 112 HOH HOH . 
F 6 HOH A 52 452 8 HOH HOH . 
F 6 HOH A 53 453 57 HOH HOH . 
F 6 HOH A 54 454 17 HOH HOH . 
F 6 HOH A 55 455 105 HOH HOH . 
F 6 HOH A 56 456 2 HOH HOH . 
F 6 HOH A 57 457 65 HOH HOH . 
F 6 HOH A 58 458 45 HOH HOH . 
F 6 HOH A 59 459 12 HOH HOH . 
F 6 HOH A 60 460 111 HOH HOH . 
F 6 HOH A 61 461 69 HOH HOH . 
F 6 HOH A 62 462 1 HOH HOH . 
F 6 HOH A 63 463 68 HOH HOH . 
F 6 HOH A 64 464 62 HOH HOH . 
F 6 HOH A 65 465 123 HOH HOH . 
F 6 HOH A 66 466 41 HOH HOH . 
F 6 HOH A 67 467 102 HOH HOH . 
F 6 HOH A 68 468 81 HOH HOH . 
F 6 HOH A 69 469 85 HOH HOH . 
F 6 HOH A 70 470 46 HOH HOH . 
F 6 HOH A 71 471 110 HOH HOH . 
F 6 HOH A 72 472 99 HOH HOH . 
F 6 HOH A 73 473 124 HOH HOH . 
F 6 HOH A 74 474 133 HOH HOH . 
F 6 HOH A 75 475 48 HOH HOH . 
F 6 HOH A 76 476 7 HOH HOH . 
F 6 HOH A 77 477 50 HOH HOH . 
F 6 HOH A 78 478 116 HOH HOH . 
F 6 HOH A 79 479 91 HOH HOH . 
F 6 HOH A 80 480 134 HOH HOH . 
F 6 HOH A 81 481 128 HOH HOH . 
F 6 HOH A 82 482 126 HOH HOH . 
F 6 HOH A 83 483 136 HOH HOH . 
F 6 HOH A 84 484 120 HOH HOH . 
F 6 HOH A 85 485 135 HOH HOH . 
F 6 HOH A 86 486 119 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -34.509 
_atom_site.Cartn_y               -3.906 
_atom_site.Cartn_z               43.337 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        54.39 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           302 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           1 
#