data_5JSI
#
_model_server_result.job_id            PL7Uys6KLNXNvcxgak3l2w 
_model_server_result.datetime_utc      '2024-11-23 09:19:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5jsi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    5JSI 
#
_exptl.entry_id    5JSI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.547 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            EICOSANE 
_entity.pdbx_number_of_molecules    22 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         63.61 
_cell.angle_beta          78.48 
_cell.angle_gamma         80.21 
_cell.entry_id            5JSI 
_cell.length_a            40.793 
_cell.length_b            56.771 
_cell.length_c            57.286 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5JSI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 Y N N 
? 2 Z N N 
? 2 AA N N 
? 2 BA N N 
? 2 CA N N 
? 2 DA N N 
? 2 EA N N 
? 2 FA N N 
? 2 GA N N 
? 2 HA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASN 199 A ASN 199 1_555 A N LYR 200 A LYR 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
covale ? covale2 A C LYR 200 A LYR 200 1_555 A N VAL 201 A VAL 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale3 B C ASN 199 B ASN 199 1_555 B N LYR 200 B LYR 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale4 B C LYR 200 B LYR 200 1_555 B N VAL 201 B VAL 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'C20 H42' 
_chem_comp.formula_weight    282.547 
_chem_comp.id                LFA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              EICOSANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'LIPID FRAGMENT' 
#
_atom_sites.entry_id                     5JSI 
_atom_sites.fract_transf_matrix[1][1]    0.024514 
_atom_sites.fract_transf_matrix[1][2]    -0.004229 
_atom_sites.fract_transf_matrix[1][3]    -0.003533 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017875 
_atom_sites.fract_transf_matrix[2][3]    -0.008398 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019683 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 LFA A 1 301 1 LFA LFA . 
D 2 LFA A 1 302 3 LFA LFA . 
E 2 LFA A 1 303 4 LFA LFA . 
F 2 LFA A 1 304 7 LFA LFA . 
G 2 LFA A 1 305 8 LFA LFA . 
H 2 LFA A 1 306 9 LFA LFA . 
I 2 LFA A 1 307 10 LFA LFA . 
J 2 LFA A 1 308 13 LFA LFA . 
K 2 LFA A 1 309 15 LFA LFA . 
L 2 LFA A 1 310 17 LFA LFA . 
M 2 LFA A 1 311 21 LFA LFA . 
N 2 LFA A 1 312 22 LFA LFA . 
O 3 IOD A 1 313 1 IOD IOD . 
P 3 IOD A 1 314 2 IOD IOD . 
Q 3 IOD A 1 315 3 IOD IOD . 
R 3 IOD A 1 316 4 IOD IOD . 
S 3 IOD A 1 317 12 IOD IOD . 
T 3 IOD A 1 318 13 IOD IOD . 
U 3 IOD A 1 319 19 IOD IOD . 
V 3 IOD A 1 320 20 IOD IOD . 
W 3 IOD A 1 321 21 IOD IOD . 
X 4 OLC A 1 322 1 OLC OLC . 
Y 2 LFA B 1 301 2 LFA LFA . 
Z 2 LFA B 1 302 5 LFA LFA . 
AA 2 LFA B 1 303 6 LFA LFA . 
BA 2 LFA B 1 304 11 LFA LFA . 
CA 2 LFA B 1 305 12 LFA LFA . 
DA 2 LFA B 1 306 14 LFA LFA . 
EA 2 LFA B 1 307 16 LFA LFA . 
FA 2 LFA B 1 308 18 LFA LFA . 
GA 2 LFA B 1 309 19 LFA LFA . 
HA 2 LFA B 1 310 20 LFA LFA . 
IA 3 IOD B 1 311 5 IOD IOD . 
JA 3 IOD B 1 312 6 IOD IOD . 
KA 3 IOD B 1 313 7 IOD IOD . 
LA 3 IOD B 1 314 8 IOD IOD . 
MA 3 IOD B 1 315 9 IOD IOD . 
NA 3 IOD B 1 316 10 IOD IOD . 
OA 3 IOD B 1 317 11 IOD IOD . 
PA 3 IOD B 1 318 14 IOD IOD . 
QA 3 IOD B 1 319 15 IOD IOD . 
RA 3 IOD B 1 320 16 IOD IOD . 
SA 3 IOD B 1 321 17 IOD IOD . 
TA 3 IOD B 1 322 18 IOD IOD . 
UA 3 IOD B 1 323 22 IOD IOD . 
VA 5 HOH A 1 401 8 HOH HOH . 
VA 5 HOH A 2 402 14 HOH HOH . 
VA 5 HOH A 3 403 30 HOH HOH . 
VA 5 HOH A 4 404 18 HOH HOH . 
VA 5 HOH A 5 405 36 HOH HOH . 
VA 5 HOH A 6 406 25 HOH HOH . 
VA 5 HOH A 7 407 16 HOH HOH . 
VA 5 HOH A 8 408 21 HOH HOH . 
VA 5 HOH A 9 409 32 HOH HOH . 
VA 5 HOH A 10 410 64 HOH HOH . 
VA 5 HOH A 11 411 5 HOH HOH . 
VA 5 HOH A 12 412 19 HOH HOH . 
VA 5 HOH A 13 413 51 HOH HOH . 
VA 5 HOH A 14 414 7 HOH HOH . 
VA 5 HOH A 15 415 6 HOH HOH . 
VA 5 HOH A 16 416 65 HOH HOH . 
VA 5 HOH A 17 417 70 HOH HOH . 
VA 5 HOH A 18 418 12 HOH HOH . 
VA 5 HOH A 19 419 1 HOH HOH . 
VA 5 HOH A 20 420 15 HOH HOH . 
VA 5 HOH A 21 421 62 HOH HOH . 
VA 5 HOH A 22 422 52 HOH HOH . 
VA 5 HOH A 23 423 59 HOH HOH . 
VA 5 HOH A 24 424 53 HOH HOH . 
VA 5 HOH A 25 425 26 HOH HOH . 
VA 5 HOH A 26 426 48 HOH HOH . 
VA 5 HOH A 27 427 76 HOH HOH . 
VA 5 HOH A 28 428 54 HOH HOH . 
VA 5 HOH A 29 429 47 HOH HOH . 
VA 5 HOH A 30 430 66 HOH HOH . 
VA 5 HOH A 31 431 68 HOH HOH . 
VA 5 HOH A 32 432 45 HOH HOH . 
VA 5 HOH A 33 433 42 HOH HOH . 
VA 5 HOH A 34 434 38 HOH HOH . 
VA 5 HOH A 35 435 57 HOH HOH . 
VA 5 HOH A 36 436 77 HOH HOH . 
VA 5 HOH A 37 437 46 HOH HOH . 
VA 5 HOH A 38 438 44 HOH HOH . 
WA 5 HOH B 1 401 39 HOH HOH . 
WA 5 HOH B 2 402 41 HOH HOH . 
WA 5 HOH B 3 403 40 HOH HOH . 
WA 5 HOH B 4 404 17 HOH HOH . 
WA 5 HOH B 5 405 9 HOH HOH . 
WA 5 HOH B 6 406 31 HOH HOH . 
WA 5 HOH B 7 407 27 HOH HOH . 
WA 5 HOH B 8 408 75 HOH HOH . 
WA 5 HOH B 9 409 24 HOH HOH . 
WA 5 HOH B 10 410 22 HOH HOH . 
WA 5 HOH B 11 411 20 HOH HOH . 
WA 5 HOH B 12 412 23 HOH HOH . 
WA 5 HOH B 13 413 4 HOH HOH . 
WA 5 HOH B 14 414 58 HOH HOH . 
WA 5 HOH B 15 415 28 HOH HOH . 
WA 5 HOH B 16 416 10 HOH HOH . 
WA 5 HOH B 17 417 3 HOH HOH . 
WA 5 HOH B 18 418 11 HOH HOH . 
WA 5 HOH B 19 419 13 HOH HOH . 
WA 5 HOH B 20 420 61 HOH HOH . 
WA 5 HOH B 21 421 74 HOH HOH . 
WA 5 HOH B 22 422 60 HOH HOH . 
WA 5 HOH B 23 423 2 HOH HOH . 
WA 5 HOH B 24 424 78 HOH HOH . 
WA 5 HOH B 25 425 33 HOH HOH . 
WA 5 HOH B 26 426 29 HOH HOH . 
WA 5 HOH B 27 427 49 HOH HOH . 
WA 5 HOH B 28 428 63 HOH HOH . 
WA 5 HOH B 29 429 69 HOH HOH . 
WA 5 HOH B 30 430 71 HOH HOH . 
WA 5 HOH B 31 431 72 HOH HOH . 
WA 5 HOH B 32 432 67 HOH HOH . 
WA 5 HOH B 33 433 43 HOH HOH . 
WA 5 HOH B 34 434 55 HOH HOH . 
WA 5 HOH B 35 435 56 HOH HOH . 
WA 5 HOH B 36 436 35 HOH HOH . 
WA 5 HOH B 37 437 34 HOH HOH . 
WA 5 HOH B 38 438 37 HOH HOH . 
WA 5 HOH B 39 439 73 HOH HOH . 
WA 5 HOH B 40 440 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 LFA . . . C 2 4.647 12.793 1.419 1 48.81 ? C13 LFA 301 A 1 
HETATM 2 C C14 LFA . . . C 2 5.894 13.234 2.184 1 47.22 ? C14 LFA 301 A 1 
HETATM 3 C C15 LFA . . . C 2 5.911 12.547 3.544 1 46.78 ? C15 LFA 301 A 1 
HETATM 4 C C16 LFA . . . C 2 5.325 13.398 4.666 1 53.02 ? C16 LFA 301 A 1 
HETATM 5 C C17 LFA . . . C 2 5.8 12.9 6.032 1 51.43 ? C17 LFA 301 A 1 
HETATM 6 C C18 LFA . . . C 2 5.181 13.784 7.112 1 55.13 ? C18 LFA 301 A 1 
HETATM 7 C C19 LFA . . . C 2 5.802 13.459 8.464 1 48.37 ? C19 LFA 301 A 1 
HETATM 8 C C20 LFA . . . C 2 5.322 12.108 8.876 1 48.37 ? C20 LFA 301 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           8 
#